RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 MUC17Q685J3 4493 aa12.73□□□□□ -0.37
IRF3-220ENST00000598108 CD164Q04900 197 aa12.73□□□□□ -0.37
IRF3-220ENST00000598108 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.72□□□□□ -0.37
IRF3-220ENST00000598108 PRO1854Q9UHT4 67 aa12.71□□□□□ -0.37
IRF3-220ENST00000598108 TMEM238LA0A1B0GVL6 79 aa12.7□□□□□ -0.38
IRF3-220ENST00000598108 A6NJY4 79 aa12.7□□□□□ -0.38
IRF3-220ENST00000598108 LIMD2Q9BT23 127 aa12.7□□□□□ -0.38
IRF3-220ENST00000598108 FAM218AQ96MZ4 157 aa12.69□□□□□ -0.38
IRF3-220ENST00000598108 HSD52Q0P140 79 aa12.68□□□□□ -0.38
IRF3-220ENST00000598108 H0YGX0 51 aa12.66□□□□□ -0.38
IRF3-220ENST00000598108 UQCR10Q9UDW1 63 aa12.66□□□□□ -0.38
IRF3-220ENST00000598108 F8WEM9 126 aa12.65□□□□□ -0.38
IRF3-220ENST00000598108 IGLV8-61A0A075B6I0 122 aa12.63□□□□□ -0.39
IRF3-220ENST00000598108 OCIAD2Q56VL3 154 aa12.63□□□□□ -0.39
IRF3-220ENST00000598108 Q5XG85 94 aa12.63□□□□□ -0.39
IRF3-220ENST00000598108 K7ERJ3 54 aa12.62□□□□□ -0.39
IRF3-220ENST00000598108 PPDPFLQ8WWR9 84 aa12.61□□□□□ -0.39
IRF3-220ENST00000598108 TRIAP1O43715 76 aa12.6□□□□□ -0.39
IRF3-220ENST00000598108 SNHG12Q9BXW3 62 aa12.6□□□□□ -0.39
IRF3-220ENST00000598108 IGFL1Q6UW32 110 aa12.59□□□□□ -0.39
IRF3-220ENST00000598108 C1orf195Q5TG92 126 aa12.58□□□□□ -0.4
IRF3-220ENST00000598108 Q6JHZ5 121 aa12.58□□□□□ -0.4
IRF3-220ENST00000598108 SNCGO76070 127 aa12.57□□□□□ -0.4
IRF3-220ENST00000598108 H3BUT2 72 aa12.56□□□□□ -0.4
IRF3-220ENST00000598108 CLEC2BQ92478 149 aa12.55□□□□□ -0.4
IRF3-220ENST00000598108 A0A1B0GX51 115 aa12.53□□□□□ -0.4
IRF3-220ENST00000598108 XP32Q5T750 250 aa12.53□□□□□ -0.4
IRF3-220ENST00000598108 ASB16-AS1Q495Z4 193 aa12.52□□□□□ -0.41
IRF3-220ENST00000598108 TRBV7-7A0A0K0K1E9 115 aa12.5□□□□□ -0.41
IRF3-220ENST00000598108 TCL1BO95988 128 aa12.5□□□□□ -0.41
IRF3-220ENST00000598108 PSMB2P49721 201 aa12.5□□□□□ -0.41
IRF3-220ENST00000598108 NDUFV3P56181 108 aaKnown RBP12.5□□□□□ -0.41
IRF3-220ENST00000598108 C9orf92A6NGG3 77 aa12.49□□□□□ -0.41
IRF3-220ENST00000598108 FABP2P12104 132 aa12.46□□□□□ -0.41
IRF3-220ENST00000598108 SEC61BP60468 96 aaKnown RBP12.45□□□□□ -0.42
IRF3-220ENST00000598108 KRTAP4-1Q9BYQ7 146 aa12.44□□□□□ -0.42
IRF3-220ENST00000598108 FAT4Q6V0I7 4981 aa12.44□□□□□ -0.42
IRF3-220ENST00000598108 COX6CP09669 75 aa12.43□□□□□ -0.42
IRF3-220ENST00000598108 SMIM6P0DI80 62 aa12.43□□□□□ -0.42
IRF3-220ENST00000598108 H3BMG7 143 aa12.42□□□□□ -0.42
IRF3-220ENST00000598108 GHRHP01286 108 aa12.4□□□□□ -0.42
IRF3-220ENST00000598108 A0A0U1RQV1 116 aa12.39□□□□□ -0.43
IRF3-220ENST00000598108 DNAL4O96015 105 aa12.38□□□□□ -0.43
IRF3-220ENST00000598108 Q6Q795 121 aa12.38□□□□□ -0.43
IRF3-220ENST00000598108 ORMDL1Q9P0S3 153 aa12.38□□□□□ -0.43
IRF3-220ENST00000598108 SCGB1C2P0DMR2 95 aa12.35□□□□□ -0.43
IRF3-220ENST00000598108 TEN1Q86WV5 123 aa12.35□□□□□ -0.43
IRF3-220ENST00000598108 LOC105371267A0A1B0GV96 52 aa12.34□□□□□ -0.43
IRF3-220ENST00000598108 M0R143 59 aa12.32□□□□□ -0.44
IRF3-220ENST00000598108 A0A1B0GV72 72 aa12.31□□□□□ -0.44
IRF3-220ENST00000598108 A0A1W2PNM2 257 aa12.31□□□□□ -0.44
IRF3-220ENST00000598108 H3BQ85 93 aa12.31□□□□□ -0.44
IRF3-220ENST00000598108 TMEM256-PLSCR3K7ERE1 68 aa12.31□□□□□ -0.44
IRF3-220ENST00000598108 LST1O00453 97 aa12.31□□□□□ -0.44
IRF3-220ENST00000598108 PCOTHQ58A44 107 aa12.31□□□□□ -0.44
IRF3-220ENST00000598108 TRACP01848 142 aa12.3□□□□□ -0.44
IRF3-220ENST00000598108 A0A087WSZ3 146 aa12.29□□□□□ -0.44
IRF3-220ENST00000598108 ANKRD29Q8N6D5 301 aa12.27□□□□□ -0.45
IRF3-220ENST00000598108 NAA38Q9BRA0 125 aaKnown RBP12.27□□□□□ -0.45
IRF3-220ENST00000598108 SS18L2Q9UHA2 77 aa12.26□□□□□ -0.45
IRF3-220ENST00000598108 UBE2V1Q13404 147 aa12.25□□□□□ -0.45
IRF3-220ENST00000598108 LCE2AQ5TA79 106 aaPredicted RBP12.25□□□□□ -0.45
IRF3-220ENST00000598108 TSTD3H0UI37 97 aa12.22□□□□□ -0.45
IRF3-220ENST00000598108 RPL37P61927 97 aaKnown RBP12.22□□□□□ -0.45
IRF3-220ENST00000598108 Q96NJ1 140 aa12.22□□□□□ -0.45
IRF3-220ENST00000598108 OBSCN-AS1Q96MR7 158 aa12.2□□□□□ -0.46
IRF3-220ENST00000598108 TRBV7-4A0A0J9YYF1 115 aa12.19□□□□□ -0.46
IRF3-220ENST00000598108 BAALC-AS2P0C853 105 aa12.19□□□□□ -0.46
IRF3-220ENST00000598108 CCKP06307 115 aa12.15□□□□□ -0.46
IRF3-220ENST00000598108 BATFQ16520 125 aa12.15□□□□□ -0.46
IRF3-220ENST00000598108 ATXN8Q156A1 80 aa12.14□□□□□ -0.47
IRF3-220ENST00000598108 RBM3P98179 157 aaKnown RBP12.13□□□□□ -0.47
IRF3-220ENST00000598108 KRTAP19-2Q3LHN2 52 aa12.08□□□□□ -0.48
IRF3-220ENST00000598108 Q75L30 129 aa12.08□□□□□ -0.48
IRF3-220ENST00000598108 DSCR8Q96T75 97 aa12.08□□□□□ -0.48
IRF3-220ENST00000598108 LCE2CQ5TA81 110 aa12.07□□□□□ -0.48
IRF3-220ENST00000598108 VPS25Q9BRG1 176 aa12.07□□□□□ -0.48
IRF3-220ENST00000598108 LINC00472Q9H8W2 130 aa12.06□□□□□ -0.48
IRF3-220ENST00000598108 IGKV4-1P06312 121 aa12.05□□□□□ -0.48
IRF3-220ENST00000598108 DEFB116Q30KQ4 102 aa12.05□□□□□ -0.48
IRF3-220ENST00000598108 SIGMAR1Q99720 223 aa12.05□□□□□ -0.48
IRF3-220ENST00000598108 DSCR10P59022 87 aa12.03□□□□□ -0.48
IRF3-220ENST00000598108 C9JAW5 83 aa12.02□□□□□ -0.49
IRF3-220ENST00000598108 TAX1BP3O14907 124 aa12.01□□□□□ -0.49
IRF3-220ENST00000598108 TRBV20-1A0A075B6N2 111 aa12□□□□□ -0.49
IRF3-220ENST00000598108 C9orf118A6NHY6 69 aa12□□□□□ -0.49
IRF3-220ENST00000598108 LYRM7Q5U5X0 104 aa12□□□□□ -0.49
IRF3-220ENST00000598108 C20orf166-AS1Q96NR2 134 aa12□□□□□ -0.49
IRF3-220ENST00000598108 ATP11AUNQ6ZP68 121 aa11.99□□□□□ -0.49
IRF3-220ENST00000598108 A8MUU9 505 aa11.98□□□□□ -0.49
IRF3-220ENST00000598108 NOTCH2NLQ7Z3S9 236 aa11.97□□□□□ -0.49
IRF3-220ENST00000598108 JMJD7-PLA2G4BH0Y9G9 81 aa11.96□□□□□ -0.49
IRF3-220ENST00000598108 Q6ZQT0 140 aa11.96□□□□□ -0.49
IRF3-220ENST00000598108 LINC00313P59037 77 aa11.95□□□□□ -0.5
IRF3-220ENST00000598108 LOC110117498A0A087WWA1 95 aa11.94□□□□□ -0.5
IRF3-220ENST00000598108 A0A1W2PPM0 123 aa11.93□□□□□ -0.5
IRF3-220ENST00000598108 KRTAP16-1A8MUX0 517 aa11.92□□□□□ -0.5
IRF3-220ENST00000598108 C14orf132Q9NPU4 83 aa11.91□□□□□ -0.5
IRF3-220ENST00000598108 IGHV6-1A0A0B4J1U7 121 aa11.89□□□□□ -0.51
IRF3-220ENST00000598108 MT1HP80294 61 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms