RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 PCOTHQ58A44 107 aa8.18□□□□□ -1.1
LIG1-215ENST00000597901 C14orf144Q96I85 54 aa8.17□□□□□ -1.1
LIG1-215ENST00000597901 TCL1BO95988 128 aa8.16□□□□□ -1.1
LIG1-215ENST00000597901 OCIAD2Q56VL3 154 aa8.16□□□□□ -1.1
LIG1-215ENST00000597901 BVES-AS1Q5T3Y7 98 aa8.16□□□□□ -1.1
LIG1-215ENST00000597901 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.16□□□□□ -1.1
LIG1-215ENST00000597901 IGLV8-61A0A075B6I0 122 aa8.15□□□□□ -1.1
LIG1-215ENST00000597901 Q6JHZ5 121 aa8.15□□□□□ -1.1
LIG1-215ENST00000597901 CFC1BP0CG36 223 aa8.14□□□□□ -1.11
LIG1-215ENST00000597901 CFC1P0CG37 223 aa8.14□□□□□ -1.11
LIG1-215ENST00000597901 HIGD1BQ9P298 99 aa8.13□□□□□ -1.11
LIG1-215ENST00000597901 KRTAP9-6A0A140TA67 174 aa8.12□□□□□ -1.11
LIG1-215ENST00000597901 SPATA45Q537H7 98 aa8.12□□□□□ -1.11
LIG1-215ENST00000597901 IGFL1Q6UW32 110 aa8.12□□□□□ -1.11
LIG1-215ENST00000597901 SNHG12Q9BXW3 62 aa8.12□□□□□ -1.11
LIG1-215ENST00000597901 PAM16Q9Y3D7 125 aa8.12□□□□□ -1.11
LIG1-215ENST00000597901 LCE2CQ5TA81 110 aa8.11□□□□□ -1.11
LIG1-215ENST00000597901 PPDPFLQ8WWR9 84 aa8.11□□□□□ -1.11
LIG1-215ENST00000597901 RAB37Q96AX2 223 aa8.11□□□□□ -1.11
LIG1-215ENST00000597901 TRBV7-7A0A0K0K1E9 115 aa8.1□□□□□ -1.11
LIG1-215ENST00000597901 CLEC2BQ92478 149 aa8.1□□□□□ -1.11
LIG1-215ENST00000597901 H0YGX0 51 aa8.08□□□□□ -1.12
LIG1-215ENST00000597901 C2orf91Q6ZV80 131 aa8.08□□□□□ -1.12
LIG1-215ENST00000597901 VAMP8Q9BV40 100 aa8.08□□□□□ -1.12
LIG1-215ENST00000597901 A0A0B4J2C4 111 aa8.07□□□□□ -1.12
LIG1-215ENST00000597901 RPL37P61927 97 aaKnown RBP8.07□□□□□ -1.12
LIG1-215ENST00000597901 KRTAP19-2Q3LHN2 52 aa8.07□□□□□ -1.12
LIG1-215ENST00000597901 H3BUT2 72 aa8.06□□□□□ -1.12
LIG1-215ENST00000597901 SNCGO76070 127 aa8.06□□□□□ -1.12
LIG1-215ENST00000597901 CEND1Q8N111 149 aa8.05□□□□□ -1.12
LIG1-215ENST00000597901 FAM218AQ96MZ4 157 aa8.04□□□□□ -1.12
LIG1-215ENST00000597901 PRO1854Q9UHT4 67 aa8.03□□□□□ -1.12
LIG1-215ENST00000597901 NDUFV3P56181 108 aaKnown RBP8.02□□□□□ -1.13
LIG1-215ENST00000597901 LCE2DQ5TA82 110 aaPredicted RBP8.01□□□□□ -1.13
LIG1-215ENST00000597901 LST1O00453 97 aa8□□□□□ -1.13
LIG1-215ENST00000597901 TMEM238LA0A1B0GVL6 79 aa7.99□□□□□ -1.13
LIG1-215ENST00000597901 A0A1B0GX51 115 aa7.99□□□□□ -1.13
LIG1-215ENST00000597901 A6NJY4 79 aa7.99□□□□□ -1.13
LIG1-215ENST00000597901 FXYD2P54710 66 aa7.99□□□□□ -1.13
LIG1-215ENST00000597901 MT1HP80294 61 aa7.99□□□□□ -1.13
LIG1-215ENST00000597901 Q6Q795 121 aa7.99□□□□□ -1.13
LIG1-215ENST00000597901 H3BMG7 143 aa7.97□□□□□ -1.13
LIG1-215ENST00000597901 GHRHP01286 108 aa7.97□□□□□ -1.13
LIG1-215ENST00000597901 TEN1Q86WV5 123 aa7.97□□□□□ -1.13
LIG1-215ENST00000597901 OBSCN-AS1Q96MR7 158 aa7.97□□□□□ -1.13
LIG1-215ENST00000597901 FABP2P12104 132 aa7.96□□□□□ -1.14
LIG1-215ENST00000597901 PYY3Q5JQD4 70 aa7.95□□□□□ -1.14
LIG1-215ENST00000597901 TRIAP1O43715 76 aa7.94□□□□□ -1.14
LIG1-215ENST00000597901 SS18L2Q9UHA2 77 aa7.94□□□□□ -1.14
LIG1-215ENST00000597901 Q75L30 129 aa7.93□□□□□ -1.14
LIG1-215ENST00000597901 A0A087WSZ3 146 aa7.92□□□□□ -1.14
LIG1-215ENST00000597901 COX6B2Q6YFQ2 88 aa7.92□□□□□ -1.14
LIG1-215ENST00000597901 ATP11AUNQ6ZP68 121 aa7.92□□□□□ -1.14
LIG1-215ENST00000597901 Q96NJ1 140 aa7.92□□□□□ -1.14
LIG1-215ENST00000597901 HSD52Q0P140 79 aa7.91□□□□□ -1.14
LIG1-215ENST00000597901 M0R2T5 61 aa7.9□□□□□ -1.14
LIG1-215ENST00000597901 A0A1W2PNM2 257 aa7.89□□□□□ -1.15
LIG1-215ENST00000597901 PSMB2P49721 201 aa7.89□□□□□ -1.15
LIG1-215ENST00000597901 K7ERJ3 54 aa7.88□□□□□ -1.15
LIG1-215ENST00000597901 ANKRD29Q8N6D5 301 aa7.87□□□□□ -1.15
LIG1-215ENST00000597901 ORMDL1Q9P0S3 153 aa7.87□□□□□ -1.15
LIG1-215ENST00000597901 CRCT1Q9UGL9 99 aa7.87□□□□□ -1.15
LIG1-215ENST00000597901 H3BQ85 93 aa7.86□□□□□ -1.15
LIG1-215ENST00000597901 DNAL4O96015 105 aa7.86□□□□□ -1.15
LIG1-215ENST00000597901 COX6CP09669 75 aa7.86□□□□□ -1.15
LIG1-215ENST00000597901 TMEM256-PLSCR3K7ERE1 68 aa7.85□□□□□ -1.15
LIG1-215ENST00000597901 UQCR10Q9UDW1 63 aa7.85□□□□□ -1.15
LIG1-215ENST00000597901 C20orf166-AS1Q96NR2 134 aa7.84□□□□□ -1.15
LIG1-215ENST00000597901 TRBV7-4A0A0J9YYF1 115 aa7.83□□□□□ -1.16
LIG1-215ENST00000597901 A8MUU9 505 aa7.83□□□□□ -1.16
LIG1-215ENST00000597901 LORP23490 312 aaPredicted RBP7.83□□□□□ -1.16
LIG1-215ENST00000597901 KRTAP10-6P60371 365 aaPredicted RBP7.83□□□□□ -1.16
LIG1-215ENST00000597901 TMA7Q9Y2S6 64 aaKnown RBP7.83□□□□□ -1.16
LIG1-215ENST00000597901 A0A1B0GV72 72 aa7.82□□□□□ -1.16
LIG1-215ENST00000597901 FSIP2Q5CZC0 6907 aa7.82□□□□□ -1.16
LIG1-215ENST00000597901 DSCR10P59022 87 aa7.81□□□□□ -1.16
LIG1-215ENST00000597901 IGKV4-1P06312 121 aa7.79□□□□□ -1.16
LIG1-215ENST00000597901 SCGB1C2P0DMR2 95 aa7.79□□□□□ -1.16
LIG1-215ENST00000597901 UBE2V1Q13404 147 aa7.79□□□□□ -1.16
LIG1-215ENST00000597901 LINC00313P59037 77 aa7.78□□□□□ -1.16
LIG1-215ENST00000597901 SIGMAR1Q99720 223 aa7.78□□□□□ -1.16
LIG1-215ENST00000597901 TRACP01848 142 aa7.77□□□□□ -1.17
LIG1-215ENST00000597901 CCKP06307 115 aa7.77□□□□□ -1.17
LIG1-215ENST00000597901 LINC00472Q9H8W2 130 aa7.77□□□□□ -1.17
LIG1-215ENST00000597901 DEFB116Q30KQ4 102 aa7.76□□□□□ -1.17
LIG1-215ENST00000597901 FLGP20930 4061 aaPredicted RBP7.74□□□□□ -1.17
LIG1-215ENST00000597901 RBM3P98179 157 aaKnown RBP7.73□□□□□ -1.17
LIG1-215ENST00000597901 NOTCH2NLQ7Z3S9 236 aa7.73□□□□□ -1.17
LIG1-215ENST00000597901 KRTAP16-1A8MUX0 517 aa7.72□□□□□ -1.17
LIG1-215ENST00000597901 BAALC-AS2P0C853 105 aa7.72□□□□□ -1.17
LIG1-215ENST00000597901 TRBV20-1A0A075B6N2 111 aa7.7□□□□□ -1.18
LIG1-215ENST00000597901 DSCR8Q96T75 97 aa7.7□□□□□ -1.18
LIG1-215ENST00000597901 VPS25Q9BRG1 176 aa7.7□□□□□ -1.18
LIG1-215ENST00000597901 IGHV6-1A0A0B4J1U7 121 aa7.68□□□□□ -1.18
LIG1-215ENST00000597901 C9JAW5 83 aa7.66□□□□□ -1.18
LIG1-215ENST00000597901 A0A1B0GVX0 72 aa7.63□□□□□ -1.19
LIG1-215ENST00000597901 M0R143 59 aa7.63□□□□□ -1.19
LIG1-215ENST00000597901 NAA38Q9BRA0 125 aaKnown RBP7.63□□□□□ -1.19
LIG1-215ENST00000597901 C8orf87E5RJ46 101 aa7.62□□□□□ -1.19
LIG1-215ENST00000597901 ATXN8Q156A1 80 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms