RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 TRACP01848 142 aa9.22□□□□□ -0.93
FOXA3-202ENST00000594297 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.22□□□□□ -0.93
FOXA3-202ENST00000594297 SPCS1Q9Y6A9 102 aa9.22□□□□□ -0.93
FOXA3-202ENST00000594297 GTF2H5Q6ZYL4 71 aa9.21□□□□□ -0.94
FOXA3-202ENST00000594297 TCL1BO95988 128 aa9.2□□□□□ -0.94
FOXA3-202ENST00000594297 PRR4Q16378 134 aa9.2□□□□□ -0.94
FOXA3-202ENST00000594297 FAM218AQ96MZ4 157 aa9.19□□□□□ -0.94
FOXA3-202ENST00000594297 Q6ZQY7 126 aa9.18□□□□□ -0.94
FOXA3-202ENST00000594297 ERC2-IT1O76042 136 aa9.17□□□□□ -0.94
FOXA3-202ENST00000594297 DEFB105AQ8NG35 78 aa9.17□□□□□ -0.94
FOXA3-202ENST00000594297 PPDPFLQ8WWR9 84 aa9.17□□□□□ -0.94
FOXA3-202ENST00000594297 ORMDL1Q9P0S3 153 aa9.17□□□□□ -0.94
FOXA3-202ENST00000594297 TEX49A0A1B0GTD5 131 aa9.16□□□□□ -0.94
FOXA3-202ENST00000594297 K7EP34 96 aa9.15□□□□□ -0.94
FOXA3-202ENST00000594297 TMEM256-PLSCR3K7ERE1 68 aa9.14□□□□□ -0.95
FOXA3-202ENST00000594297 GAGE2AQ6NT46 116 aa9.14□□□□□ -0.95
FOXA3-202ENST00000594297 SPRR4Q96PI1 79 aa9.14□□□□□ -0.95
FOXA3-202ENST00000594297 H3BMG7 143 aa9.13□□□□□ -0.95
FOXA3-202ENST00000594297 ST20-AS1Q8NBB2 130 aa9.13□□□□□ -0.95
FOXA3-202ENST00000594297 IGLV5-48A0A075B6I7 105 aa9.12□□□□□ -0.95
FOXA3-202ENST00000594297 C9JAW5 83 aa9.12□□□□□ -0.95
FOXA3-202ENST00000594297 KRTAP1-4P0C5Y4 121 aa9.12□□□□□ -0.95
FOXA3-202ENST00000594297 F8WEM9 126 aa9.11□□□□□ -0.95
FOXA3-202ENST00000594297 BAALC-AS2P0C853 105 aa9.11□□□□□ -0.95
FOXA3-202ENST00000594297 LAMTOR3Q9UHA4 124 aa9.11□□□□□ -0.95
FOXA3-202ENST00000594297 SPRR1BP22528 89 aa9.09□□□□□ -0.95
FOXA3-202ENST00000594297 FAM229BQ4G0N7 80 aa9.09□□□□□ -0.95
FOXA3-202ENST00000594297 LINC00483Q53H64 154 aa9.08□□□□□ -0.96
FOXA3-202ENST00000594297 Q8N377 158 aa9.08□□□□□ -0.96
FOXA3-202ENST00000594297 A0A1B0GV90 55 aa9.07□□□□□ -0.96
FOXA3-202ENST00000594297 H3BT86 120 aa9.07□□□□□ -0.96
FOXA3-202ENST00000594297 CRYGAP11844 174 aa9.07□□□□□ -0.96
FOXA3-202ENST00000594297 UBE2V1Q13404 147 aa9.06□□□□□ -0.96
FOXA3-202ENST00000594297 MUC17Q685J3 4493 aa9.05□□□□□ -0.96
FOXA3-202ENST00000594297 F8W1H4 67 aa9.05□□□□□ -0.96
FOXA3-202ENST00000594297 NDUFV3P56181 108 aaKnown RBP9.05□□□□□ -0.96
FOXA3-202ENST00000594297 LINC01547P58512 204 aaPredicted RBP9.05□□□□□ -0.96
FOXA3-202ENST00000594297 ANKRD29Q8N6D5 301 aa9.05□□□□□ -0.96
FOXA3-202ENST00000594297 JMJD7-PLA2G4BH0Y9G9 81 aa9.02□□□□□ -0.97
FOXA3-202ENST00000594297 C9orf153Q5TBE3 101 aa9.02□□□□□ -0.97
FOXA3-202ENST00000594297 IGLV9-49A0A0B4J1Y8 123 aa9.01□□□□□ -0.97
FOXA3-202ENST00000594297 ANAPC11Q9NYG5 84 aa9.01□□□□□ -0.97
FOXA3-202ENST00000594297 MTURNQ8N3F0 131 aa9□□□□□ -0.97
FOXA3-202ENST00000594297 SMIM29Q86T20 159 aa8.99□□□□□ -0.97
FOXA3-202ENST00000594297 Q8NBF4 154 aa8.99□□□□□ -0.97
FOXA3-202ENST00000594297 RBM3P98179 157 aaKnown RBP8.98□□□□□ -0.97
FOXA3-202ENST00000594297 Q6JHZ5 121 aa8.98□□□□□ -0.97
FOXA3-202ENST00000594297 SSBP3-AS1Q7Z2R9 100 aa8.98□□□□□ -0.97
FOXA3-202ENST00000594297 C3orf22Q8N5N4 141 aa8.98□□□□□ -0.97
FOXA3-202ENST00000594297 TYMSOSQ8TAI1 123 aa8.98□□□□□ -0.97
FOXA3-202ENST00000594297 MOBPQ13875 183 aa8.97□□□□□ -0.97
FOXA3-202ENST00000594297 DSCR8Q96T75 97 aa8.97□□□□□ -0.97
FOXA3-202ENST00000594297 C21orf62-AS1Q17RA5 79 aa8.96□□□□□ -0.98
FOXA3-202ENST00000594297 PRO0461Q9UI25 63 aa8.95□□□□□ -0.98
FOXA3-202ENST00000594297 IGLV8-61A0A075B6I0 122 aa8.94□□□□□ -0.98
FOXA3-202ENST00000594297 A0A087X002 238 aa8.94□□□□□ -0.98
FOXA3-202ENST00000594297 PDE6GP18545 87 aa8.94□□□□□ -0.98
FOXA3-202ENST00000594297 C4orf48Q5BLP8 95 aa8.94□□□□□ -0.98
FOXA3-202ENST00000594297 A0A1B0GV72 72 aa8.93□□□□□ -0.98
FOXA3-202ENST00000594297 SMCPP49901 116 aaPredicted RBP8.92□□□□□ -0.98
FOXA3-202ENST00000594297 TEN1Q86WV5 123 aa8.91□□□□□ -0.98
FOXA3-202ENST00000594297 KRTAP13-2Q52LG2 175 aa8.9□□□□□ -0.98
FOXA3-202ENST00000594297 RETNLBQ9BQ08 111 aa8.9□□□□□ -0.98
FOXA3-202ENST00000594297 SPAG11AQ6PDA7 123 aa8.89□□□□□ -0.99
FOXA3-202ENST00000594297 ETDBQ3ZM63 59 aa8.88□□□□□ -0.99
FOXA3-202ENST00000594297 IGFL1Q6UW32 110 aa8.88□□□□□ -0.99
FOXA3-202ENST00000594297 OBSCN-AS1Q96MR7 158 aa8.88□□□□□ -0.99
FOXA3-202ENST00000594297 CD164Q04900 197 aa8.87□□□□□ -0.99
FOXA3-202ENST00000594297 LCE2DQ5TA82 110 aaPredicted RBP8.87□□□□□ -0.99
FOXA3-202ENST00000594297 CRCT1Q9UGL9 99 aa8.87□□□□□ -0.99
FOXA3-202ENST00000594297 LOC110117498A0A087WWA1 95 aa8.86□□□□□ -0.99
FOXA3-202ENST00000594297 TRBV7-4A0A0J9YYF1 115 aa8.86□□□□□ -0.99
FOXA3-202ENST00000594297 LINC00304Q8N9R0 145 aa8.86□□□□□ -0.99
FOXA3-202ENST00000594297 CDIP1Q9H305 208 aa8.86□□□□□ -0.99
FOXA3-202ENST00000594297 C14orf132Q9NPU4 83 aa8.86□□□□□ -0.99
FOXA3-202ENST00000594297 CCKP06307 115 aa8.85□□□□□ -0.99
FOXA3-202ENST00000594297 TPRXLQ17RH7 258 aa8.85□□□□□ -0.99
FOXA3-202ENST00000594297 VPS25Q9BRG1 176 aa8.85□□□□□ -0.99
FOXA3-202ENST00000594297 A0A1B0GW54 56 aa8.83□□□□□ -1
FOXA3-202ENST00000594297 SPINK1P00995 79 aa8.83□□□□□ -1
FOXA3-202ENST00000594297 Q6Q795 121 aa8.82□□□□□ -1
FOXA3-202ENST00000594297 Q6ZQT0 140 aa8.82□□□□□ -1
FOXA3-202ENST00000594297 HRCT1Q6UXD1 115 aa8.81□□□□□ -1
FOXA3-202ENST00000594297 LIMD2Q9BT23 127 aa8.81□□□□□ -1
FOXA3-202ENST00000594297 FSIP2Q5CZC0 6907 aa8.8□□□□□ -1
FOXA3-202ENST00000594297 SS18L2Q9UHA2 77 aa8.8□□□□□ -1
FOXA3-202ENST00000594297 IGLV7-46A0A075B6I9 117 aa8.78□□□□□ -1
FOXA3-202ENST00000594297 A0A0G2JQZ4 141 aa8.78□□□□□ -1
FOXA3-202ENST00000594297 TRBV7-7A0A0K0K1E9 115 aa8.78□□□□□ -1
FOXA3-202ENST00000594297 J3QR89 54 aa8.78□□□□□ -1
FOXA3-202ENST00000594297 A0A1W2PNM2 257 aa8.77□□□□□ -1.01
FOXA3-202ENST00000594297 RPS29P62273 56 aaKnown RBP8.77□□□□□ -1.01
FOXA3-202ENST00000594297 A0A087WSZ3 146 aa8.73□□□□□ -1.01
FOXA3-202ENST00000594297 ACYP1P07311 99 aa8.73□□□□□ -1.01
FOXA3-202ENST00000594297 Q5XG85 94 aa8.71□□□□□ -1.02
FOXA3-202ENST00000594297 NREPQ16612 68 aa8.69□□□□□ -1.02
FOXA3-202ENST00000594297 KRTAP4-1Q9BYQ7 146 aa8.69□□□□□ -1.02
FOXA3-202ENST00000594297 UBL5Q9BZL1 73 aa8.68□□□□□ -1.02
FOXA3-202ENST00000594297 FAM240AA0A1B0GVK7 77 aa8.67□□□□□ -1.02
FOXA3-202ENST00000594297 ASB16-AS1Q495Z4 193 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms