RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 LCE2AQ5TA79 106 aaPredicted RBP8.38□□□□□ -1.07
TRIM28-203ENST00000593582 HIGD1BQ9P298 99 aa8.38□□□□□ -1.07
TRIM28-203ENST00000593582 C9orf92A6NGG3 77 aa8.37□□□□□ -1.07
TRIM28-203ENST00000593582 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.37□□□□□ -1.07
TRIM28-203ENST00000593582 RAB37Q96AX2 223 aa8.37□□□□□ -1.07
TRIM28-203ENST00000593582 TCL1BO95988 128 aa8.36□□□□□ -1.07
TRIM28-203ENST00000593582 CFC1BP0CG36 223 aa8.36□□□□□ -1.07
TRIM28-203ENST00000593582 CFC1P0CG37 223 aa8.36□□□□□ -1.07
TRIM28-203ENST00000593582 C1orf195Q5TG92 126 aa8.36□□□□□ -1.07
TRIM28-203ENST00000593582 Q6JHZ5 121 aa8.35□□□□□ -1.07
TRIM28-203ENST00000593582 PPDPFLQ8WWR9 84 aa8.34□□□□□ -1.07
TRIM28-203ENST00000593582 KRTAP4-1Q9BYQ7 146 aa8.34□□□□□ -1.07
TRIM28-203ENST00000593582 IGLV8-61A0A075B6I0 122 aa8.33□□□□□ -1.08
TRIM28-203ENST00000593582 A0A0B4J2C4 111 aa8.33□□□□□ -1.08
TRIM28-203ENST00000593582 SNCGO76070 127 aa8.33□□□□□ -1.08
TRIM28-203ENST00000593582 OCIAD2Q56VL3 154 aa8.33□□□□□ -1.08
TRIM28-203ENST00000593582 C2orf91Q6ZV80 131 aa8.33□□□□□ -1.08
TRIM28-203ENST00000593582 CLEC2BQ92478 149 aa8.33□□□□□ -1.08
TRIM28-203ENST00000593582 SNHG12Q9BXW3 62 aa8.32□□□□□ -1.08
TRIM28-203ENST00000593582 IGFL1Q6UW32 110 aa8.31□□□□□ -1.08
TRIM28-203ENST00000593582 TMEM238LA0A1B0GVL6 79 aa8.3□□□□□ -1.08
TRIM28-203ENST00000593582 A6NJY4 79 aa8.3□□□□□ -1.08
TRIM28-203ENST00000593582 H0YGX0 51 aa8.3□□□□□ -1.08
TRIM28-203ENST00000593582 CEND1Q8N111 149 aa8.3□□□□□ -1.08
TRIM28-203ENST00000593582 TRBV7-7A0A0K0K1E9 115 aa8.28□□□□□ -1.08
TRIM28-203ENST00000593582 PCOTHQ58A44 107 aa8.28□□□□□ -1.08
TRIM28-203ENST00000593582 PRO1854Q9UHT4 67 aa8.27□□□□□ -1.09
TRIM28-203ENST00000593582 H3BUT2 72 aa8.26□□□□□ -1.09
TRIM28-203ENST00000593582 FAM218AQ96MZ4 157 aa8.25□□□□□ -1.09
TRIM28-203ENST00000593582 GHRHP01286 108 aa8.23□□□□□ -1.09
TRIM28-203ENST00000593582 FXYD2P54710 66 aa8.23□□□□□ -1.09
TRIM28-203ENST00000593582 PYY3Q5JQD4 70 aa8.23□□□□□ -1.09
TRIM28-203ENST00000593582 A0A1B0GX51 115 aa8.22□□□□□ -1.09
TRIM28-203ENST00000593582 NDUFV3P56181 108 aaKnown RBP8.22□□□□□ -1.09
TRIM28-203ENST00000593582 RPL37P61927 97 aaKnown RBP8.2□□□□□ -1.1
TRIM28-203ENST00000593582 HSD52Q0P140 79 aa8.2□□□□□ -1.1
TRIM28-203ENST00000593582 TRIAP1O43715 76 aa8.19□□□□□ -1.1
TRIM28-203ENST00000593582 LST1O00453 97 aa8.18□□□□□ -1.1
TRIM28-203ENST00000593582 FABP2P12104 132 aa8.18□□□□□ -1.1
TRIM28-203ENST00000593582 Q6Q795 121 aa8.18□□□□□ -1.1
TRIM28-203ENST00000593582 KRTAP9-2Q9BYQ4 174 aa8.18□□□□□ -1.1
TRIM28-203ENST00000593582 SS18L2Q9UHA2 77 aa8.18□□□□□ -1.1
TRIM28-203ENST00000593582 TMA7Q9Y2S6 64 aaKnown RBP8.18□□□□□ -1.1
TRIM28-203ENST00000593582 H3BMG7 143 aa8.17□□□□□ -1.1
TRIM28-203ENST00000593582 TEN1Q86WV5 123 aa8.17□□□□□ -1.1
TRIM28-203ENST00000593582 PSMB2P49721 201 aa8.15□□□□□ -1.1
TRIM28-203ENST00000593582 K7ERJ3 54 aa8.14□□□□□ -1.11
TRIM28-203ENST00000593582 DNAL4O96015 105 aa8.14□□□□□ -1.11
TRIM28-203ENST00000593582 OBSCN-AS1Q96MR7 158 aa8.14□□□□□ -1.11
TRIM28-203ENST00000593582 UQCR10Q9UDW1 63 aa8.14□□□□□ -1.11
TRIM28-203ENST00000593582 COX6CP09669 75 aa8.13□□□□□ -1.11
TRIM28-203ENST00000593582 LCE2CQ5TA81 110 aa8.13□□□□□ -1.11
TRIM28-203ENST00000593582 A0A087WSZ3 146 aa8.12□□□□□ -1.11
TRIM28-203ENST00000593582 H3BQ85 93 aa8.11□□□□□ -1.11
TRIM28-203ENST00000593582 KRTAP19-2Q3LHN2 52 aa8.11□□□□□ -1.11
TRIM28-203ENST00000593582 ORMDL1Q9P0S3 153 aa8.11□□□□□ -1.11
TRIM28-203ENST00000593582 TMEM256-PLSCR3K7ERE1 68 aa8.08□□□□□ -1.12
TRIM28-203ENST00000593582 ATP11AUNQ6ZP68 121 aa8.08□□□□□ -1.12
TRIM28-203ENST00000593582 Q75L30 129 aa8.08□□□□□ -1.12
TRIM28-203ENST00000593582 ANKRD29Q8N6D5 301 aa8.07□□□□□ -1.12
TRIM28-203ENST00000593582 Q96NJ1 140 aa8.07□□□□□ -1.12
TRIM28-203ENST00000593582 A0A1W2PNM2 257 aa8.06□□□□□ -1.12
TRIM28-203ENST00000593582 A0A1B0GV72 72 aa8.05□□□□□ -1.12
TRIM28-203ENST00000593582 TRBV7-4A0A0J9YYF1 115 aa8.04□□□□□ -1.12
TRIM28-203ENST00000593582 SCGB1C2P0DMR2 95 aa8.04□□□□□ -1.12
TRIM28-203ENST00000593582 MT1HP80294 61 aa8.04□□□□□ -1.12
TRIM28-203ENST00000593582 COX6B2Q6YFQ2 88 aa8.03□□□□□ -1.12
TRIM28-203ENST00000593582 TRACP01848 142 aa8.01□□□□□ -1.13
TRIM28-203ENST00000593582 UBE2V1Q13404 147 aa8.01□□□□□ -1.13
TRIM28-203ENST00000593582 SIGMAR1Q99720 223 aa8.01□□□□□ -1.13
TRIM28-203ENST00000593582 C20orf166-AS1Q96NR2 134 aa8□□□□□ -1.13
TRIM28-203ENST00000593582 CCKP06307 115 aa7.99□□□□□ -1.13
TRIM28-203ENST00000593582 A8MUU9 505 aa7.97□□□□□ -1.13
TRIM28-203ENST00000593582 IGKV4-1P06312 121 aa7.97□□□□□ -1.13
TRIM28-203ENST00000593582 DSCR10P59022 87 aa7.97□□□□□ -1.13
TRIM28-203ENST00000593582 M0R143 59 aa7.95□□□□□ -1.14
TRIM28-203ENST00000593582 M0R2T5 61 aa7.95□□□□□ -1.14
TRIM28-203ENST00000593582 RBM3P98179 157 aaKnown RBP7.95□□□□□ -1.14
TRIM28-203ENST00000593582 LINC00313P59037 77 aa7.94□□□□□ -1.14
TRIM28-203ENST00000593582 LCE2DQ5TA82 110 aaPredicted RBP7.94□□□□□ -1.14
TRIM28-203ENST00000593582 DSCR8Q96T75 97 aa7.94□□□□□ -1.14
TRIM28-203ENST00000593582 VPS25Q9BRG1 176 aa7.94□□□□□ -1.14
TRIM28-203ENST00000593582 LINC00472Q9H8W2 130 aa7.93□□□□□ -1.14
TRIM28-203ENST00000593582 BAALC-AS2P0C853 105 aa7.92□□□□□ -1.14
TRIM28-203ENST00000593582 DEFB116Q30KQ4 102 aa7.92□□□□□ -1.14
TRIM28-203ENST00000593582 FLGP20930 4061 aaPredicted RBP7.9□□□□□ -1.14
TRIM28-203ENST00000593582 KRTAP9-6A0A140TA67 174 aa7.9□□□□□ -1.14
TRIM28-203ENST00000593582 SMIM6P0DI80 62 aa7.9□□□□□ -1.14
TRIM28-203ENST00000593582 C9JAW5 83 aa7.89□□□□□ -1.15
TRIM28-203ENST00000593582 LORP23490 312 aaPredicted RBP7.89□□□□□ -1.15
TRIM28-203ENST00000593582 KRTAP10-6P60371 365 aaPredicted RBP7.89□□□□□ -1.15
TRIM28-203ENST00000593582 IGHV6-1A0A0B4J1U7 121 aa7.88□□□□□ -1.15
TRIM28-203ENST00000593582 ATXN8Q156A1 80 aa7.88□□□□□ -1.15
TRIM28-203ENST00000593582 TRBV20-1A0A075B6N2 111 aa7.87□□□□□ -1.15
TRIM28-203ENST00000593582 C21orf62-AS1Q17RA5 79 aa7.87□□□□□ -1.15
TRIM28-203ENST00000593582 KRTAP16-1A8MUX0 517 aa7.86□□□□□ -1.15
TRIM28-203ENST00000593582 NOTCH2NLQ7Z3S9 236 aa7.86□□□□□ -1.15
TRIM28-203ENST00000593582 NAA38Q9BRA0 125 aaKnown RBP7.86□□□□□ -1.15
TRIM28-203ENST00000593582 JMJD7-PLA2G4BH0Y9G9 81 aa7.83□□□□□ -1.16
TRIM28-203ENST00000593582 A0A1B0GVX0 72 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms