RNA–Protein interactions for RNA: ENST00000589706.1

SMAD4-208, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-208ENST00000589706 LYPD2Q6UXB3 125 aa3.82□□□□□ -1.8
SMAD4-208ENST00000589706 Q6ZTI0 123 aa3.82□□□□□ -1.8
SMAD4-208ENST00000589706 SPANXA2-OT1Q8N9U9 137 aa3.82□□□□□ -1.8
SMAD4-208ENST00000589706 TYMSOSQ8TAI1 123 aa3.82□□□□□ -1.8
SMAD4-208ENST00000589706 HIGD2AQ9BW72 106 aa3.82□□□□□ -1.8
SMAD4-208ENST00000589706 ZNF702PQ9H963 129 aa3.82□□□□□ -1.8
SMAD4-208ENST00000589706 NACAE9PAV3 2078 aa3.82□□□□□ -1.8
SMAD4-208ENST00000589706 HUWE1Q7Z6Z7 4374 aaKnown RBP3.81□□□□□ -1.8
SMAD4-208ENST00000589706 IGHV3-72A0A0B4J1Y9 119 aa3.81□□□□□ -1.8
SMAD4-208ENST00000589706 PRM2P04554 102 aa3.81□□□□□ -1.8
SMAD4-208ENST00000589706 CCL18P55774 89 aa3.81□□□□□ -1.8
SMAD4-208ENST00000589706 DSCAML1Q8TD84 2053 aa3.8□□□□□ -1.8
SMAD4-208ENST00000589706 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.8□□□□□ -1.8
SMAD4-208ENST00000589706 A6NED7 52 aa3.8□□□□□ -1.8
SMAD4-208ENST00000589706 IGHV3-23P01764 117 aa3.8□□□□□ -1.8
SMAD4-208ENST00000589706 IGKV4-1P06312 121 aa3.8□□□□□ -1.8
SMAD4-208ENST00000589706 COX7B2Q8TF08 81 aa3.8□□□□□ -1.8
SMAD4-208ENST00000589706 UBR4Q5T4S7 5183 aa3.8□□□□□ -1.8
SMAD4-208ENST00000589706 IGHV3OR16-13A0A075B7E8 117 aa3.79□□□□□ -1.8
SMAD4-208ENST00000589706 IGHV3-49A0A0A0MS15 119 aa3.79□□□□□ -1.8
SMAD4-208ENST00000589706 LINC00158P58513 81 aa3.79□□□□□ -1.8
SMAD4-208ENST00000589706 LINC00313P59037 77 aa3.79□□□□□ -1.8
SMAD4-208ENST00000589706 COX6A2Q02221 97 aa3.79□□□□□ -1.8
SMAD4-208ENST00000589706 PRB3Q04118 309 aaPredicted RBP3.79□□□□□ -1.8
SMAD4-208ENST00000589706 LINC00575Q6W349 94 aa3.79□□□□□ -1.8
SMAD4-208ENST00000589706 PRR15LQ9BU68 103 aa3.79□□□□□ -1.8
SMAD4-208ENST00000589706 ALMS1Q8TCU4 4167 aa3.78□□□□□ -1.8
SMAD4-208ENST00000589706 H3BPC8 53 aa3.78□□□□□ -1.8
SMAD4-208ENST00000589706 GIG44P09565 113 aaPredicted RBP3.78□□□□□ -1.8
SMAD4-208ENST00000589706 COX7BP24311 80 aa3.78□□□□□ -1.8
SMAD4-208ENST00000589706 MOBPQ13875 183 aa3.78□□□□□ -1.8
SMAD4-208ENST00000589706 LINC00467Q9BRT7 94 aa3.78□□□□□ -1.8
SMAD4-208ENST00000589706 S4R3C0 116 aa3.78□□□□□ -1.8
SMAD4-208ENST00000589706 HERC1Q15751 4861 aa3.78□□□□□ -1.8
SMAD4-208ENST00000589706 ETDCA0A1B0GVM5 59 aa3.77□□□□□ -1.81
SMAD4-208ENST00000589706 LRCOL1A6NCL2 159 aa3.77□□□□□ -1.81
SMAD4-208ENST00000589706 MINOS1Q5TGZ0 78 aa3.77□□□□□ -1.81
SMAD4-208ENST00000589706 CASC2Q6XLA1 102 aa3.77□□□□□ -1.81
SMAD4-208ENST00000589706 LINC00208Q96KT6 92 aa3.77□□□□□ -1.81
SMAD4-208ENST00000589706 CELA1Q9UNI1 258 aa3.77□□□□□ -1.81
SMAD4-208ENST00000589706 TRGV2A0A075B6R0 118 aa3.76□□□□□ -1.81
SMAD4-208ENST00000589706 H0Y9J4 135 aa3.76□□□□□ -1.81
SMAD4-208ENST00000589706 NDUFA4O00483 81 aa3.76□□□□□ -1.81
SMAD4-208ENST00000589706 IGHV3-53P01767 116 aa3.76□□□□□ -1.81
SMAD4-208ENST00000589706 RNASE13Q5GAN3 156 aaKnown RBP3.76□□□□□ -1.81
SMAD4-208ENST00000589706 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.76□□□□□ -1.81
SMAD4-208ENST00000589706 DEFB104AQ8WTQ1 72 aa3.76□□□□□ -1.81
SMAD4-208ENST00000589706 KRTAP9-8Q9BYQ0 159 aa3.76□□□□□ -1.81
SMAD4-208ENST00000589706 PLECQ15149 4684 aaKnown RBP3.76□□□□□ -1.81
SMAD4-208ENST00000589706 IGHV3OR16-9A0A0B4J2B5 98 aa3.75□□□□□ -1.81
SMAD4-208ENST00000589706 ODF3BA8MYP8 253 aa3.75□□□□□ -1.81
SMAD4-208ENST00000589706 COX17Q14061 63 aa3.75□□□□□ -1.81
SMAD4-208ENST00000589706 C10orf99Q6UWK7 81 aa3.75□□□□□ -1.81
SMAD4-208ENST00000589706 TNCP24821 2201 aa3.74□□□□□ -1.81
SMAD4-208ENST00000589706 IGHV3-66A0A0C4DH42 116 aa3.74□□□□□ -1.81
SMAD4-208ENST00000589706 FAM168BA1KXE4 195 aa3.74□□□□□ -1.81
SMAD4-208ENST00000589706 A8MU10 97 aa3.74□□□□□ -1.81
SMAD4-208ENST00000589706 LINC01558Q9Y6Z2 57 aa3.74□□□□□ -1.81
SMAD4-208ENST00000589706 KMT2AQ03164 3969 aa3.73□□□□□ -1.81
SMAD4-208ENST00000589706 IGLV4-60A0A075B6I1 120 aa3.73□□□□□ -1.81
SMAD4-208ENST00000589706 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.73□□□□□ -1.81
SMAD4-208ENST00000589706 IGHV3-73A0A0B4J1V6 119 aa3.73□□□□□ -1.81
SMAD4-208ENST00000589706 A6NDX4 124 aa3.73□□□□□ -1.81
SMAD4-208ENST00000589706 C7orf33Q8WU49 177 aa3.73□□□□□ -1.81
SMAD4-208ENST00000589706 KCNQ1DNQ9H478 68 aa3.73□□□□□ -1.81
SMAD4-208ENST00000589706 PLAC8Q9NZF1 115 aa3.73□□□□□ -1.81
SMAD4-208ENST00000589706 MINOS1-NBL1R4GNA1 71 aa3.73□□□□□ -1.81
SMAD4-208ENST00000589706 IGHV3OR16-8A0A075B7F1 116 aa3.72□□□□□ -1.81
SMAD4-208ENST00000589706 A0A1B0GVY2 172 aa3.72□□□□□ -1.81
SMAD4-208ENST00000589706 M0R2N4 97 aa3.72□□□□□ -1.81
SMAD4-208ENST00000589706 COX7A1P24310 79 aa3.72□□□□□ -1.81
SMAD4-208ENST00000589706 CNBPP62633 177 aaKnown RBP3.72□□□□□ -1.81
SMAD4-208ENST00000589706 C6orf99Q4VX62 202 aa3.72□□□□□ -1.81
SMAD4-208ENST00000589706 SCXQ7RTU7 201 aa3.72□□□□□ -1.81
SMAD4-208ENST00000589706 DNAH10Q8IVF4 4471 aa3.72□□□□□ -1.81
SMAD4-208ENST00000589706 SORL1Q92673 2214 aa3.71□□□□□ -1.82
SMAD4-208ENST00000589706 H3BUA1 57 aa3.71□□□□□ -1.82
SMAD4-208ENST00000589706 WFDC10AQ9H1F0 79 aa3.71□□□□□ -1.82
SMAD4-208ENST00000589706 IGHV3-74A0A0B4J1X5 117 aa3.7□□□□□ -1.82
SMAD4-208ENST00000589706 PRR3P79522 188 aaKnown RBP3.7□□□□□ -1.82
SMAD4-208ENST00000589706 Q8IZM0 81 aa3.7□□□□□ -1.82
SMAD4-208ENST00000589706 Q8N9W7 124 aa3.7□□□□□ -1.82
SMAD4-208ENST00000589706 USMG5Q96IX5 58 aa3.7□□□□□ -1.82
SMAD4-208ENST00000589706 KRTAP2-2Q9BYT5 123 aa3.7□□□□□ -1.82
SMAD4-208ENST00000589706 PKHD1P08F94 4074 aa3.7□□□□□ -1.82
SMAD4-208ENST00000589706 DEFB136Q30KP8 78 aa3.69□□□□□ -1.82
SMAD4-208ENST00000589706 Q6ZQY7 126 aa3.69□□□□□ -1.82
SMAD4-208ENST00000589706 C16orf74Q96GX8 76 aa3.69□□□□□ -1.82
SMAD4-208ENST00000589706 RETNLBQ9BQ08 111 aa3.69□□□□□ -1.82
SMAD4-208ENST00000589706 DMBT1Q9UGM3 2413 aaPredicted RBP3.69□□□□□ -1.82
SMAD4-208ENST00000589706 LINC00612Q8N6U2 182 aa3.68□□□□□ -1.82
SMAD4-208ENST00000589706 TOMM7Q9P0U1 55 aa3.68□□□□□ -1.82
SMAD4-208ENST00000589706 IGHV6-1A0A0B4J1U7 121 aa3.67□□□□□ -1.82
SMAD4-208ENST00000589706 NUPR2A6NF83 97 aa3.67□□□□□ -1.82
SMAD4-208ENST00000589706 A8MTW9 85 aa3.67□□□□□ -1.82
SMAD4-208ENST00000589706 IGLV6-57P01721 117 aa3.67□□□□□ -1.82
SMAD4-208ENST00000589706 CHTF8P0CG12 524 aa3.67□□□□□ -1.82
SMAD4-208ENST00000589706 DSCR10P59022 87 aa3.67□□□□□ -1.82
SMAD4-208ENST00000589706 SPAG11BQ08648 103 aa3.67□□□□□ -1.82
SMAD4-208ENST00000589706 Q6ZR54 194 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms