RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 CDIP1Q9H305 208 aa7.1□□□□□ -1.27
SS18-225ENST00000585121 TRBV20-1A0A075B6N2 111 aa7.09□□□□□ -1.27
SS18-225ENST00000585121 SCGB1C2P0DMR2 95 aa7.09□□□□□ -1.27
SS18-225ENST00000585121 TPRXLQ17RH7 258 aa7.09□□□□□ -1.27
SS18-225ENST00000585121 SPCS1Q9Y6A9 102 aa7.09□□□□□ -1.27
SS18-225ENST00000585121 UBE2V1Q13404 147 aa7.08□□□□□ -1.28
SS18-225ENST00000585121 FP248Q71RG6 208 aaPredicted RBP7.08□□□□□ -1.28
SS18-225ENST00000585121 DHRS4-AS1Q9P1J3 65 aa7.08□□□□□ -1.28
SS18-225ENST00000585121 K7EP34 96 aa7.07□□□□□ -1.28
SS18-225ENST00000585121 C9orf153Q5TBE3 101 aa7.07□□□□□ -1.28
SS18-225ENST00000585121 TRIAP1O43715 76 aa7.06□□□□□ -1.28
SS18-225ENST00000585121 A0A0U1RQV1 116 aa7.06□□□□□ -1.28
SS18-225ENST00000585121 COX7BP24311 80 aa7.06□□□□□ -1.28
SS18-225ENST00000585121 SMIM11BQ8TCY0 68 aa7.06□□□□□ -1.28
SS18-225ENST00000585121 MUC2Q02817 5179 aa7.06□□□□□ -1.28
SS18-225ENST00000585121 H0YGX0 51 aa7.05□□□□□ -1.28
SS18-225ENST00000585121 RPS29P62273 56 aaKnown RBP7.05□□□□□ -1.28
SS18-225ENST00000585121 ST20-AS1Q8NBB2 130 aa7.05□□□□□ -1.28
SS18-225ENST00000585121 C6orf99Q4VX62 202 aa7.04□□□□□ -1.28
SS18-225ENST00000585121 TCL1BO95988 128 aa7.03□□□□□ -1.28
SS18-225ENST00000585121 ELOF1P60002 83 aaKnown RBP7.03□□□□□ -1.28
SS18-225ENST00000585121 SLC25A20O43772 301 aa7.02□□□□□ -1.29
SS18-225ENST00000585121 ATXN8Q156A1 80 aa7.02□□□□□ -1.29
SS18-225ENST00000585121 LAMTOR3Q9UHA4 124 aa7.02□□□□□ -1.29
SS18-225ENST00000585121 TRBV7-6A0A0J9YX20 115 aa7.01□□□□□ -1.29
SS18-225ENST00000585121 H3BMG7 143 aa7.01□□□□□ -1.29
SS18-225ENST00000585121 MUC17Q685J3 4493 aa7.01□□□□□ -1.29
SS18-225ENST00000585121 LST1O00453 97 aa7.01□□□□□ -1.29
SS18-225ENST00000585121 SPRR1BP22528 89 aa7.01□□□□□ -1.29
SS18-225ENST00000585121 F8W1H4 67 aa7□□□□□ -1.29
SS18-225ENST00000585121 Q8N377 158 aa7□□□□□ -1.29
SS18-225ENST00000585121 A0A1B0GX51 115 aa6.98□□□□□ -1.29
SS18-225ENST00000585121 TRACP01848 142 aa6.98□□□□□ -1.29
SS18-225ENST00000585121 DEFB105AQ8NG35 78 aa6.98□□□□□ -1.29
SS18-225ENST00000585121 TEX49A0A1B0GTD5 131 aa6.97□□□□□ -1.29
SS18-225ENST00000585121 SNCGO76070 127 aa6.97□□□□□ -1.29
SS18-225ENST00000585121 CLEC2BQ92478 149 aa6.97□□□□□ -1.29
SS18-225ENST00000585121 KRTAP13-3Q3SY46 172 aa6.96□□□□□ -1.29
SS18-225ENST00000585121 LIMD2Q9BT23 127 aa6.96□□□□□ -1.29
SS18-225ENST00000585121 FAM218AQ96MZ4 157 aa6.95□□□□□ -1.3
SS18-225ENST00000585121 PRO0461Q9UI25 63 aa6.95□□□□□ -1.3
SS18-225ENST00000585121 HRCT1Q6UXD1 115 aa6.94□□□□□ -1.3
SS18-225ENST00000585121 LINC00575Q6W349 94 aa6.94□□□□□ -1.3
SS18-225ENST00000585121 C9JAW5 83 aa6.93□□□□□ -1.3
SS18-225ENST00000585121 H3BT86 120 aa6.92□□□□□ -1.3
SS18-225ENST00000585121 LCE2BO14633 110 aa6.92□□□□□ -1.3
SS18-225ENST00000585121 DNAL4O96015 105 aa6.92□□□□□ -1.3
SS18-225ENST00000585121 CD164Q04900 197 aa6.91□□□□□ -1.3
SS18-225ENST00000585121 ANKRD29Q8N6D5 301 aa6.91□□□□□ -1.3
SS18-225ENST00000585121 IGLV5-48A0A075B6I7 105 aa6.91□□□□□ -1.3
SS18-225ENST00000585121 hADV29S1A0JD25 119 aa6.91□□□□□ -1.3
SS18-225ENST00000585121 SMCPP49901 116 aaPredicted RBP6.91□□□□□ -1.3
SS18-225ENST00000585121 SEC61BP60468 96 aaKnown RBP6.91□□□□□ -1.3
SS18-225ENST00000585121 GHRHP01286 108 aa6.9□□□□□ -1.31
SS18-225ENST00000585121 H3BQ85 93 aa6.89□□□□□ -1.31
SS18-225ENST00000585121 BAALC-AS2P0C853 105 aa6.89□□□□□ -1.31
SS18-225ENST00000585121 ASB16-AS1Q495Z4 193 aa6.89□□□□□ -1.31
SS18-225ENST00000585121 SMIM29Q86T20 159 aa6.89□□□□□ -1.31
SS18-225ENST00000585121 FAT4Q6V0I7 4981 aa6.89□□□□□ -1.31
SS18-225ENST00000585121 LINC01547P58512 204 aaPredicted RBP6.88□□□□□ -1.31
SS18-225ENST00000585121 MTURNQ8N3F0 131 aa6.88□□□□□ -1.31
SS18-225ENST00000585121 F8WEM9 126 aa6.87□□□□□ -1.31
SS18-225ENST00000585121 OCIAD2Q56VL3 154 aa6.87□□□□□ -1.31
SS18-225ENST00000585121 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.87□□□□□ -1.31
SS18-225ENST00000585121 ORMDL1Q9P0S3 153 aa6.87□□□□□ -1.31
SS18-225ENST00000585121 TMEM256-PLSCR3K7ERE1 68 aa6.86□□□□□ -1.31
SS18-225ENST00000585121 ETDBQ3ZM63 59 aa6.86□□□□□ -1.31
SS18-225ENST00000585121 TEN1Q86WV5 123 aa6.86□□□□□ -1.31
SS18-225ENST00000585121 XP32Q5T750 250 aa6.85□□□□□ -1.31
SS18-225ENST00000585121 Q5XG85 94 aa6.84□□□□□ -1.31
SS18-225ENST00000585121 Q6ZQY7 126 aa6.84□□□□□ -1.31
SS18-225ENST00000585121 LOC100996750A0A140TA64 210 aa6.82□□□□□ -1.32
SS18-225ENST00000585121 KRTAP4-6Q9BYQ5 205 aa6.82□□□□□ -1.32
SS18-225ENST00000585121 PPDPFLQ8WWR9 84 aa6.81□□□□□ -1.32
SS18-225ENST00000585121 C9orf92A6NGG3 77 aa6.81□□□□□ -1.32
SS18-225ENST00000585121 Q6JHZ5 121 aa6.81□□□□□ -1.32
SS18-225ENST00000585121 A0A0G2JQZ4 141 aa6.8□□□□□ -1.32
SS18-225ENST00000585121 JMJD7-PLA2G4BH0Y9G9 81 aa6.8□□□□□ -1.32
SS18-225ENST00000585121 J3QR89 54 aa6.8□□□□□ -1.32
SS18-225ENST00000585121 K7ERU9 68 aa6.79□□□□□ -1.32
SS18-225ENST00000585121 C1orf195Q5TG92 126 aa6.79□□□□□ -1.32
SS18-225ENST00000585121 OBSCN-AS1Q96MR7 158 aa6.79□□□□□ -1.32
SS18-225ENST00000585121 LCE2AQ5TA79 106 aaPredicted RBP6.77□□□□□ -1.33
SS18-225ENST00000585121 IGLV8-61A0A075B6I0 122 aa6.76□□□□□ -1.33
SS18-225ENST00000585121 NDUFV3P56181 108 aaKnown RBP6.75□□□□□ -1.33
SS18-225ENST00000585121 KRTAP4-1Q9BYQ7 146 aa6.75□□□□□ -1.33
SS18-225ENST00000585121 RBM3P98179 157 aaKnown RBP6.74□□□□□ -1.33
SS18-225ENST00000585121 IGFL1Q6UW32 110 aa6.74□□□□□ -1.33
SS18-225ENST00000585121 TRBV7-7A0A0K0K1E9 115 aa6.73□□□□□ -1.33
SS18-225ENST00000585121 PCOTHQ58A44 107 aa6.73□□□□□ -1.33
SS18-225ENST00000585121 PDE6GP18545 87 aa6.72□□□□□ -1.33
SS18-225ENST00000585121 C21orf62-AS1Q17RA5 79 aa6.72□□□□□ -1.33
SS18-225ENST00000585121 DSCR8Q96T75 97 aa6.71□□□□□ -1.34
SS18-225ENST00000585121 LOC110117498A0A087WWA1 95 aa6.7□□□□□ -1.34
SS18-225ENST00000585121 ACYP1P07311 99 aa6.7□□□□□ -1.34
SS18-225ENST00000585121 C14orf132Q9NPU4 83 aa6.7□□□□□ -1.34
SS18-225ENST00000585121 FAM240AA0A1B0GVK7 77 aa6.69□□□□□ -1.34
SS18-225ENST00000585121 TRBV7-4A0A0J9YYF1 115 aa6.68□□□□□ -1.34
SS18-225ENST00000585121 CCKP06307 115 aa6.68□□□□□ -1.34
SS18-225ENST00000585121 SS18L2Q9UHA2 77 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 148.5 ms