RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 LCA10Q71F78 164 aa1.16□□□□□ -2.22
SMCHD1-211ENST00000584897 DIRC1Q969H9 104 aa1.16□□□□□ -2.22
SMCHD1-211ENST00000584897 NDUFA12Q9UI09 145 aa1.16□□□□□ -2.22
SMCHD1-211ENST00000584897 IGKV4-1P06312 121 aa1.16□□□□□ -2.22
SMCHD1-211ENST00000584897 FAM74A4Q5TZK3 123 aa1.16□□□□□ -2.22
SMCHD1-211ENST00000584897 UBE2D1P51668 147 aa1.16□□□□□ -2.22
SMCHD1-211ENST00000584897 LCE3AQ5TA76 89 aa1.16□□□□□ -2.22
SMCHD1-211ENST00000584897 SPANXDQ9BXN6 97 aa1.16□□□□□ -2.22
SMCHD1-211ENST00000584897 PSORS1C2Q9UIG4 136 aa1.16□□□□□ -2.22
SMCHD1-211ENST00000584897 WNK1Q9H4A3 2382 aa1.15□□□□□ -2.22
SMCHD1-211ENST00000584897 TRAV13-2A0A0B4J235 113 aa1.15□□□□□ -2.22
SMCHD1-211ENST00000584897 IGIPA6NJ69 53 aa1.15□□□□□ -2.22
SMCHD1-211ENST00000584897 D6R8Y8 96 aa1.15□□□□□ -2.22
SMCHD1-211ENST00000584897 TAX1BP3O14907 124 aa1.15□□□□□ -2.22
SMCHD1-211ENST00000584897 KRTAP1-4P0C5Y4 121 aa1.15□□□□□ -2.22
SMCHD1-211ENST00000584897 Q6ZRN7 208 aaPredicted RBP1.15□□□□□ -2.22
SMCHD1-211ENST00000584897 COX7B2Q8TF08 81 aa1.15□□□□□ -2.22
SMCHD1-211ENST00000584897 IFI27L1Q96BM0 104 aa1.15□□□□□ -2.22
SMCHD1-211ENST00000584897 PANO1I0J062 215 aa1.15□□□□□ -2.23
SMCHD1-211ENST00000584897 M0R378 163 aa1.15□□□□□ -2.23
SMCHD1-211ENST00000584897 IGHV3-30-3P0DP02 117 aa1.15□□□□□ -2.23
SMCHD1-211ENST00000584897 SPAG11BQ08648 103 aa1.15□□□□□ -2.23
SMCHD1-211ENST00000584897 KRTAP25-1Q3LHN0 102 aa1.15□□□□□ -2.23
SMCHD1-211ENST00000584897 MEIG1Q5JSS6 88 aa1.15□□□□□ -2.23
SMCHD1-211ENST00000584897 WFDC10AQ9H1F0 79 aa1.15□□□□□ -2.23
SMCHD1-211ENST00000584897 HIGD1BQ9P298 99 aa1.15□□□□□ -2.23
SMCHD1-211ENST00000584897 WNK2Q9Y3S1 2297 aa1.15□□□□□ -2.23
SMCHD1-211ENST00000584897 LRCOL1A6NCL2 159 aa1.15□□□□□ -2.23
SMCHD1-211ENST00000584897 H0YGX0 51 aa1.15□□□□□ -2.23
SMCHD1-211ENST00000584897 APOC3P02656 99 aa1.15□□□□□ -2.23
SMCHD1-211ENST00000584897 HTN1P15515 57 aa1.15□□□□□ -2.23
SMCHD1-211ENST00000584897 PDE6GP18545 87 aa1.15□□□□□ -2.23
SMCHD1-211ENST00000584897 FP248Q71RG6 208 aaPredicted RBP1.15□□□□□ -2.23
SMCHD1-211ENST00000584897 VPS25Q9BRG1 176 aa1.15□□□□□ -2.23
SMCHD1-211ENST00000584897 J3KT08 172 aa1.14□□□□□ -2.23
SMCHD1-211ENST00000584897 IGKCP01834 107 aa1.14□□□□□ -2.23
SMCHD1-211ENST00000584897 SSBP3-AS1Q7Z2R9 100 aa1.14□□□□□ -2.23
SMCHD1-211ENST00000584897 ROS1P08922 2347 aa1.14□□□□□ -2.23
SMCHD1-211ENST00000584897 TRAV7A0A075B6U4 112 aa1.14□□□□□ -2.23
SMCHD1-211ENST00000584897 A0A0J9YY99 117 aa1.14□□□□□ -2.23
SMCHD1-211ENST00000584897 ZNF73O43830 326 aaPredicted RBP1.14□□□□□ -2.23
SMCHD1-211ENST00000584897 SCGB1A1P11684 91 aa1.14□□□□□ -2.23
SMCHD1-211ENST00000584897 Q6JHZ5 121 aa1.14□□□□□ -2.23
SMCHD1-211ENST00000584897 C18orf32Q8TCD1 76 aa1.14□□□□□ -2.23
SMCHD1-211ENST00000584897 LIMD2Q9BT23 127 aa1.14□□□□□ -2.23
SMCHD1-211ENST00000584897 TMEM126AQ9H061 195 aa1.14□□□□□ -2.23
SMCHD1-211ENST00000584897 TMSB15BA0A087X1C1 80 aa1.14□□□□□ -2.23
SMCHD1-211ENST00000584897 M0R143 59 aa1.14□□□□□ -2.23
SMCHD1-211ENST00000584897 BVES-AS1Q5T3Y7 98 aa1.14□□□□□ -2.23
SMCHD1-211ENST00000584897 ENHOQ6UWT2 76 aa1.14□□□□□ -2.23
SMCHD1-211ENST00000584897 SPACA4Q8TDM5 124 aa1.14□□□□□ -2.23
SMCHD1-211ENST00000584897 TNCP24821 2201 aa1.14□□□□□ -2.23
SMCHD1-211ENST00000584897 A8MUU9 505 aa1.13□□□□□ -2.23
SMCHD1-211ENST00000584897 HIST1H2BKO60814 126 aa1.13□□□□□ -2.23
SMCHD1-211ENST00000584897 HIST1H2BJP06899 126 aa1.13□□□□□ -2.23
SMCHD1-211ENST00000584897 COX6CP09669 75 aa1.13□□□□□ -2.23
SMCHD1-211ENST00000584897 KRTAP26-1Q6PEX3 210 aa1.13□□□□□ -2.23
SMCHD1-211ENST00000584897 ADM2Q7Z4H4 148 aa1.13□□□□□ -2.23
SMCHD1-211ENST00000584897 WFDC10BQ8IUB3 73 aa1.13□□□□□ -2.23
SMCHD1-211ENST00000584897 KRTAP11-1Q8IUC1 163 aa1.13□□□□□ -2.23
SMCHD1-211ENST00000584897 LINC00269Q8N2A0 174 aa1.13□□□□□ -2.23
SMCHD1-211ENST00000584897 TMEM254Q8TBM7 123 aa1.13□□□□□ -2.23
SMCHD1-211ENST00000584897 SMCR5Q8TEV8 140 aa1.13□□□□□ -2.23
SMCHD1-211ENST00000584897 MUC4Q99102 2169 aa1.13□□□□□ -2.23
SMCHD1-211ENST00000584897 K7ERU9 68 aa1.13□□□□□ -2.23
SMCHD1-211ENST00000584897 BCE1O60756 84 aa1.13□□□□□ -2.23
SMCHD1-211ENST00000584897 FXYD2P54710 66 aa1.13□□□□□ -2.23
SMCHD1-211ENST00000584897 Q5XG85 94 aa1.13□□□□□ -2.23
SMCHD1-211ENST00000584897 C2orf82Q6UX34 121 aa1.13□□□□□ -2.23
SMCHD1-211ENST00000584897 C12orf57Q99622 126 aa1.13□□□□□ -2.23
SMCHD1-211ENST00000584897 ERG28Q9UKR5 140 aa1.13□□□□□ -2.23
SMCHD1-211ENST00000584897 DNAH8Q96JB1 4490 aa1.13□□□□□ -2.23
SMCHD1-211ENST00000584897 TMEM256-PLSCR3K7ERE1 68 aa1.13□□□□□ -2.23
SMCHD1-211ENST00000584897 IGHV3-30P01768 117 aa1.13□□□□□ -2.23
SMCHD1-211ENST00000584897 IGHV3-33P01772 117 aa1.13□□□□□ -2.23
SMCHD1-211ENST00000584897 IGHV3-30-5P0DP03 117 aa1.13□□□□□ -2.23
SMCHD1-211ENST00000584897 PRB4P10163 310 aaPredicted RBP1.13□□□□□ -2.23
SMCHD1-211ENST00000584897 SPRR1BP22528 89 aa1.13□□□□□ -2.23
SMCHD1-211ENST00000584897 IGFL1Q6UW32 110 aa1.13□□□□□ -2.23
SMCHD1-211ENST00000584897 SORL1Q92673 2214 aa1.12□□□□□ -2.23
SMCHD1-211ENST00000584897 SYS1-DBNDD2H3BUS1 97 aa1.12□□□□□ -2.23
SMCHD1-211ENST00000584897 ASB16-AS1Q495Z4 193 aa1.12□□□□□ -2.23
SMCHD1-211ENST00000584897 MUC17Q685J3 4493 aa1.12□□□□□ -2.23
SMCHD1-211ENST00000584897 MUC21A0A0G2JKD1 596 aa1.12□□□□□ -2.23
SMCHD1-211ENST00000584897 MUC21A0A140T8X8 626 aa1.12□□□□□ -2.23
SMCHD1-211ENST00000584897 SMIM6P0DI80 62 aa1.12□□□□□ -2.23
SMCHD1-211ENST00000584897 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.12□□□□□ -2.23
SMCHD1-211ENST00000584897 KCNQ1DNQ9H478 68 aa1.12□□□□□ -2.23
SMCHD1-211ENST00000584897 R4GN34 69 aa1.12□□□□□ -2.23
SMCHD1-211ENST00000584897 F8WEM9 126 aa1.12□□□□□ -2.23
SMCHD1-211ENST00000584897 Q6ZUT4 128 aa1.12□□□□□ -2.23
SMCHD1-211ENST00000584897 TEN1Q86WV5 123 aa1.12□□□□□ -2.23
SMCHD1-211ENST00000584897 RPL39LQ96EH5 51 aaKnown RBP1.12□□□□□ -2.23
SMCHD1-211ENST00000584897 ETDCA0A1B0GVM5 59 aa1.11□□□□□ -2.23
SMCHD1-211ENST00000584897 HRES1P13985 223 aa1.11□□□□□ -2.23
SMCHD1-211ENST00000584897 ADCYAP1P18509 176 aa1.11□□□□□ -2.23
SMCHD1-211ENST00000584897 SPRR1AP35321 89 aa1.11□□□□□ -2.23
SMCHD1-211ENST00000584897 HSD52Q0P140 79 aa1.11□□□□□ -2.23
SMCHD1-211ENST00000584897 LINC01554Q52M75 96 aa1.11□□□□□ -2.23
SMCHD1-211ENST00000584897 TMEM170BQ5T4T1 132 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms