RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	ASB16-AS1	Q495Z4	193 aa		7.36	□□□□□ -1.23
SREBF1-223	ENST00000584760		Q6ZQY7	126 aa		7.36	□□□□□ -1.23
SREBF1-223	ENST00000584760	CFC1B	P0CG36	223 aa		7.35	□□□□□ -1.23
SREBF1-223	ENST00000584760	CFC1	P0CG37	223 aa		7.35	□□□□□ -1.23
SREBF1-223	ENST00000584760	BVES-AS1	Q5T3Y7	98 aa		7.35	□□□□□ -1.23
SREBF1-223	ENST00000584760		Q5XG85	94 aa		7.35	□□□□□ -1.23
SREBF1-223	ENST00000584760		A0A0B4J2C4	111 aa		7.33	□□□□□ -1.24
SREBF1-223	ENST00000584760	XP32	Q5T750	250 aa		7.33	□□□□□ -1.24
SREBF1-223	ENST00000584760	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	7.32	□□□□□ -1.24
SREBF1-223	ENST00000584760	FSIP2	Q5CZC0	6907 aa		7.31	□□□□□ -1.24
SREBF1-223	ENST00000584760		F8WEM9	126 aa		7.31	□□□□□ -1.24
SREBF1-223	ENST00000584760	PYY3	Q5JQD4	70 aa		7.31	□□□□□ -1.24
SREBF1-223	ENST00000584760	CEND1	Q8N111	149 aa		7.31	□□□□□ -1.24
SREBF1-223	ENST00000584760	RAB37	Q96AX2	223 aa		7.31	□□□□□ -1.24
SREBF1-223	ENST00000584760	IGLV8-61	A0A075B6I0	122 aa		7.3	□□□□□ -1.24
SREBF1-223	ENST00000584760	SEC61B	P60468	96 aa	Known RBP	7.3	□□□□□ -1.24
SREBF1-223	ENST00000584760	C1orf195	Q5TG92	126 aa		7.29	□□□□□ -1.24
SREBF1-223	ENST00000584760	PPDPFL	Q8WWR9	84 aa		7.29	□□□□□ -1.24
SREBF1-223	ENST00000584760	KRTAP4-1	Q9BYQ7	146 aa		7.29	□□□□□ -1.24
SREBF1-223	ENST00000584760	FXYD2	P54710	66 aa		7.28	□□□□□ -1.24
SREBF1-223	ENST00000584760	CLEC2B	Q92478	149 aa		7.28	□□□□□ -1.24
SREBF1-223	ENST00000584760	TMEM238L	A0A1B0GVL6	79 aa		7.27	□□□□□ -1.25
SREBF1-223	ENST00000584760		A6NJY4	79 aa		7.27	□□□□□ -1.25
SREBF1-223	ENST00000584760		Q6JHZ5	121 aa		7.27	□□□□□ -1.25
SREBF1-223	ENST00000584760	IGFL1	Q6UW32	110 aa		7.27	□□□□□ -1.25
SREBF1-223	ENST00000584760	FAM218A	Q96MZ4	157 aa		7.27	□□□□□ -1.25
SREBF1-223	ENST00000584760	OCIAD2	Q56VL3	154 aa		7.26	□□□□□ -1.25
SREBF1-223	ENST00000584760	TMA7	Q9Y2S6	64 aa	Known RBP	7.26	□□□□□ -1.25
SREBF1-223	ENST00000584760	C9orf92	A6NGG3	77 aa		7.25	□□□□□ -1.25
SREBF1-223	ENST00000584760		H0YGX0	51 aa		7.25	□□□□□ -1.25
SREBF1-223	ENST00000584760	PRO1854	Q9UHT4	67 aa		7.25	□□□□□ -1.25
SREBF1-223	ENST00000584760	TCL1B	O95988	128 aa		7.24	□□□□□ -1.25
SREBF1-223	ENST00000584760	TRBV7-7	A0A0K0K1E9	115 aa		7.23	□□□□□ -1.25
SREBF1-223	ENST00000584760	HSD52	Q0P140	79 aa		7.23	□□□□□ -1.25
SREBF1-223	ENST00000584760		H3BUT2	72 aa		7.22	□□□□□ -1.25
SREBF1-223	ENST00000584760	SNHG12	Q9BXW3	62 aa		7.22	□□□□□ -1.25
SREBF1-223	ENST00000584760	TRIAP1	O43715	76 aa		7.21	□□□□□ -1.26
SREBF1-223	ENST00000584760		A0A1B0GX51	115 aa		7.2	□□□□□ -1.26
SREBF1-223	ENST00000584760	SNCG	O76070	127 aa		7.2	□□□□□ -1.26
SREBF1-223	ENST00000584760		K7ERJ3	54 aa		7.19	□□□□□ -1.26
SREBF1-223	ENST00000584760	NDUFV3	P56181	108 aa	Known RBP	7.18	□□□□□ -1.26
SREBF1-223	ENST00000584760	UQCR10	Q9UDW1	63 aa		7.18	□□□□□ -1.26
SREBF1-223	ENST00000584760	PCOTH	Q58A44	107 aa		7.17	□□□□□ -1.26
SREBF1-223	ENST00000584760	LCE2C	Q5TA81	110 aa		7.16	□□□□□ -1.26
SREBF1-223	ENST00000584760		Q6Q795	121 aa		7.16	□□□□□ -1.26
SREBF1-223	ENST00000584760	GHRH	P01286	108 aa		7.14	□□□□□ -1.27
SREBF1-223	ENST00000584760	RPL37	P61927	97 aa	Known RBP	7.14	□□□□□ -1.27
SREBF1-223	ENST00000584760		H3BMG7	143 aa		7.12	□□□□□ -1.27
SREBF1-223	ENST00000584760	FABP2	P12104	132 aa		7.12	□□□□□ -1.27
SREBF1-223	ENST00000584760	PSMB2	P49721	201 aa		7.12	□□□□□ -1.27
SREBF1-223	ENST00000584760	TEN1	Q86WV5	123 aa		7.12	□□□□□ -1.27
SREBF1-223	ENST00000584760	LST1	O00453	97 aa		7.11	□□□□□ -1.27
SREBF1-223	ENST00000584760	DNAL4	O96015	105 aa		7.11	□□□□□ -1.27
SREBF1-223	ENST00000584760	KRTAP19-2	Q3LHN2	52 aa		7.11	□□□□□ -1.27
SREBF1-223	ENST00000584760	SS18L2	Q9UHA2	77 aa		7.11	□□□□□ -1.27
SREBF1-223	ENST00000584760	MT1H	P80294	61 aa		7.1	□□□□□ -1.27
SREBF1-223	ENST00000584760	ORMDL1	Q9P0S3	153 aa		7.1	□□□□□ -1.27
SREBF1-223	ENST00000584760		A0A087WSZ3	146 aa		7.09	□□□□□ -1.27
SREBF1-223	ENST00000584760	COX6C	P09669	75 aa		7.09	□□□□□ -1.27
SREBF1-223	ENST00000584760		A0A1W2PNM2	257 aa		7.08	□□□□□ -1.28
SREBF1-223	ENST00000584760		H3BQ85	93 aa		7.07	□□□□□ -1.28
SREBF1-223	ENST00000584760	OBSCN-AS1	Q96MR7	158 aa		7.07	□□□□□ -1.28
SREBF1-223	ENST00000584760		Q96NJ1	140 aa		7.07	□□□□□ -1.28
SREBF1-223	ENST00000584760	TMEM256-PLSCR3	K7ERE1	68 aa		7.05	□□□□□ -1.28
SREBF1-223	ENST00000584760		A0A1B0GV72	72 aa		7.04	□□□□□ -1.28
SREBF1-223	ENST00000584760	TRAC	P01848	142 aa		7.04	□□□□□ -1.28
SREBF1-223	ENST00000584760		Q75L30	129 aa		7.04	□□□□□ -1.28
SREBF1-223	ENST00000584760	TRBV7-4	A0A0J9YYF1	115 aa		7.03	□□□□□ -1.28
SREBF1-223	ENST00000584760	SMIM6	P0DI80	62 aa		7.03	□□□□□ -1.28
SREBF1-223	ENST00000584760	LOR	P23490	312 aa	Predicted RBP	7.03	□□□□□ -1.28
SREBF1-223	ENST00000584760	ANKRD29	Q8N6D5	301 aa		7.03	□□□□□ -1.28
SREBF1-223	ENST00000584760	KRTAP10-6	P60371	365 aa	Predicted RBP	7.02	□□□□□ -1.29
SREBF1-223	ENST00000584760	UBE2V1	Q13404	147 aa		7.02	□□□□□ -1.29
SREBF1-223	ENST00000584760		M0R143	59 aa		7	□□□□□ -1.29
SREBF1-223	ENST00000584760	SCGB1C2	P0DMR2	95 aa		7	□□□□□ -1.29
SREBF1-223	ENST00000584760		M0R2T5	61 aa		6.98	□□□□□ -1.29
SREBF1-223	ENST00000584760	CCK	P06307	115 aa		6.98	□□□□□ -1.29
SREBF1-223	ENST00000584760	C20orf166-AS1	Q96NR2	134 aa		6.98	□□□□□ -1.29
SREBF1-223	ENST00000584760	SIGMAR1	Q99720	223 aa		6.98	□□□□□ -1.29
SREBF1-223	ENST00000584760		A8MUU9	505 aa		6.96	□□□□□ -1.3
SREBF1-223	ENST00000584760	ATP11AUN	Q6ZP68	121 aa		6.96	□□□□□ -1.3
SREBF1-223	ENST00000584760	NAA38	Q9BRA0	125 aa	Known RBP	6.95	□□□□□ -1.3
SREBF1-223	ENST00000584760	LINC00472	Q9H8W2	130 aa		6.95	□□□□□ -1.3
SREBF1-223	ENST00000584760	IGKV4-1	P06312	121 aa		6.94	□□□□□ -1.3
SREBF1-223	ENST00000584760	DSCR10	P59022	87 aa		6.94	□□□□□ -1.3
SREBF1-223	ENST00000584760	RBM3	P98179	157 aa	Known RBP	6.94	□□□□□ -1.3
SREBF1-223	ENST00000584760	KRTAP9-7	A8MTY7	169 aa		6.93	□□□□□ -1.3
SREBF1-223	ENST00000584760	BAALC-AS2	P0C853	105 aa		6.93	□□□□□ -1.3
SREBF1-223	ENST00000584760	FLG	P20930	4061 aa	Predicted RBP	6.93	□□□□□ -1.3
SREBF1-223	ENST00000584760	DSCR8	Q96T75	97 aa		6.92	□□□□□ -1.3
SREBF1-223	ENST00000584760	KRTAP16-1	A8MUX0	517 aa		6.91	□□□□□ -1.3
SREBF1-223	ENST00000584760	TSTD3	H0UI37	97 aa		6.91	□□□□□ -1.3
SREBF1-223	ENST00000584760	ATXN8	Q156A1	80 aa		6.91	□□□□□ -1.3
SREBF1-223	ENST00000584760	DEFB116	Q30KQ4	102 aa		6.91	□□□□□ -1.3
SREBF1-223	ENST00000584760	VPS25	Q9BRG1	176 aa		6.91	□□□□□ -1.3
SREBF1-223	ENST00000584760	LOC105371267	A0A1B0GV96	52 aa		6.89	□□□□□ -1.31
SREBF1-223	ENST00000584760	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	6.89	□□□□□ -1.31
SREBF1-223	ENST00000584760	LINC00313	P59037	77 aa		6.89	□□□□□ -1.31
SREBF1-223	ENST00000584760	COX6B2	Q6YFQ2	88 aa		6.89	□□□□□ -1.31
SREBF1-223	ENST00000584760	NOTCH2NL	Q7Z3S9	236 aa		6.89	□□□□□ -1.31

Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms