RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 C9orf163Q8N9P6 203 aa7.14□□□□□ -1.27
TOP3A-217ENST00000584582 CIRBP-AS1Q8TBR5 109 aa7.14□□□□□ -1.27
TOP3A-217ENST00000584582 LINC00474Q9P2X8 69 aa7.14□□□□□ -1.27
TOP3A-217ENST00000584582 KRTAP7-1Q8IUC3 87 aa7.13□□□□□ -1.27
TOP3A-217ENST00000584582 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.13□□□□□ -1.27
TOP3A-217ENST00000584582 IGKV4-1P06312 121 aa7.12□□□□□ -1.27
TOP3A-217ENST00000584582 MOBPQ13875 183 aa7.12□□□□□ -1.27
TOP3A-217ENST00000584582 MP68P56378 58 aa7.11□□□□□ -1.27
TOP3A-217ENST00000584582 LINC00208Q96KT6 92 aa7.11□□□□□ -1.27
TOP3A-217ENST00000584582 A0A087WTM6 91 aa7.1□□□□□ -1.27
TOP3A-217ENST00000584582 IGHV6-1A0A0B4J1U7 121 aa7.1□□□□□ -1.27
TOP3A-217ENST00000584582 KRTAP11-1Q8IUC1 163 aa7.1□□□□□ -1.27
TOP3A-217ENST00000584582 PKIGQ9Y2B9 76 aa7.09□□□□□ -1.27
TOP3A-217ENST00000584582 A0A0U1RQV1 116 aa7.08□□□□□ -1.28
TOP3A-217ENST00000584582 CNBPP62633 177 aaKnown RBP7.08□□□□□ -1.28
TOP3A-217ENST00000584582 PLA2G2DQ9UNK4 145 aa7.08□□□□□ -1.28
TOP3A-217ENST00000584582 IGLV5-48A0A075B6I7 105 aa7.07□□□□□ -1.28
TOP3A-217ENST00000584582 BRK1Q8WUW1 75 aa7.07□□□□□ -1.28
TOP3A-217ENST00000584582 HCG22E2RYF7 251 aa7.07□□□□□ -1.28
TOP3A-217ENST00000584582 CASC2Q6XLA1 102 aa7.07□□□□□ -1.28
TOP3A-217ENST00000584582 BCE1O60756 84 aa7.06□□□□□ -1.28
TOP3A-217ENST00000584582 RETNLBQ9BQ08 111 aa7.06□□□□□ -1.28
TOP3A-217ENST00000584582 SPRR1AP35321 89 aa7.05□□□□□ -1.28
TOP3A-217ENST00000584582 PSORS1C2Q9UIG4 136 aa7.05□□□□□ -1.28
TOP3A-217ENST00000584582 PCOTHQ58A44 107 aa7.04□□□□□ -1.28
TOP3A-217ENST00000584582 IGLV5-37A0A075B6J1 123 aa7.04□□□□□ -1.28
TOP3A-217ENST00000584582 TNP2Q05952 138 aa7.04□□□□□ -1.28
TOP3A-217ENST00000584582 RPS28P62857 69 aaKnown RBP7.03□□□□□ -1.28
TOP3A-217ENST00000584582 KRTAP4-16G5E9R7 235 aaPredicted RBP7.03□□□□□ -1.28
TOP3A-217ENST00000584582 FBN3Q75N90 2809 aa7.02□□□□□ -1.29
TOP3A-217ENST00000584582 OXTP01178 125 aa7.02□□□□□ -1.29
TOP3A-217ENST00000584582 DSCR10P59022 87 aa7.01□□□□□ -1.29
TOP3A-217ENST00000584582 H7BZZ5 65 aa7.01□□□□□ -1.29
TOP3A-217ENST00000584582 ANK2Q01484 3957 aa6.99□□□□□ -1.29
TOP3A-217ENST00000584582 SERP1Q9Y6X1 66 aa6.99□□□□□ -1.29
TOP3A-217ENST00000584582 H0Y9P7 68 aa6.98□□□□□ -1.29
TOP3A-217ENST00000584582 ZNF706Q9Y5V0 76 aaPredicted RBP6.98□□□□□ -1.29
TOP3A-217ENST00000584582 NDUFC1O43677 76 aa6.97□□□□□ -1.29
TOP3A-217ENST00000584582 C4orf48Q5BLP8 95 aa6.97□□□□□ -1.29
TOP3A-217ENST00000584582 SMIM26A0A096LP01 95 aa6.95□□□□□ -1.3
TOP3A-217ENST00000584582 SMR3BP02814 79 aaPredicted RBP6.94□□□□□ -1.3
TOP3A-217ENST00000584582 KLKP1Q107X0 134 aa6.94□□□□□ -1.3
TOP3A-217ENST00000584582 LINC00336Q6ZUF6 198 aa6.94□□□□□ -1.3
TOP3A-217ENST00000584582 hDV103S1A0JD37 113 aa6.94□□□□□ -1.3
TOP3A-217ENST00000584582 SPRR4Q96PI1 79 aa6.94□□□□□ -1.3
TOP3A-217ENST00000584582 SPACA4Q8TDM5 124 aa6.94□□□□□ -1.3
TOP3A-217ENST00000584582 OCR1Q9BZK8 76 aa6.94□□□□□ -1.3
TOP3A-217ENST00000584582 MEGF8Q7Z7M0 2845 aa6.93□□□□□ -1.3
TOP3A-217ENST00000584582 ZNF861PO60384 105 aa6.93□□□□□ -1.3
TOP3A-217ENST00000584582 C1orf64Q8NEQ6 169 aa6.93□□□□□ -1.3
TOP3A-217ENST00000584582 PSPHP1O15172 72 aa6.92□□□□□ -1.3
TOP3A-217ENST00000584582 WWC2-AS2Q96NR7 200 aa6.92□□□□□ -1.3
TOP3A-217ENST00000584582 PRR15Q8IV56 129 aa6.91□□□□□ -1.3
TOP3A-217ENST00000584582 KRTAP10-2P60368 255 aa6.91□□□□□ -1.3
TOP3A-217ENST00000584582 Q5XG85 94 aa6.91□□□□□ -1.3
TOP3A-217ENST00000584582 A8MWP4 228 aa6.9□□□□□ -1.3
TOP3A-217ENST00000584582 Q6ZRN7 208 aaPredicted RBP6.9□□□□□ -1.3
TOP3A-217ENST00000584582 DMBT1Q9UGM3 2413 aaPredicted RBP6.89□□□□□ -1.31
TOP3A-217ENST00000584582 A0A1B0GW54 56 aa6.89□□□□□ -1.31
TOP3A-217ENST00000584582 IGLV7-43P04211 117 aa6.87□□□□□ -1.31
TOP3A-217ENST00000584582 HUWE1Q7Z6Z7 4374 aaKnown RBP6.86□□□□□ -1.31
TOP3A-217ENST00000584582 FLG2Q5D862 2391 aaPredicted RBP6.86□□□□□ -1.31
TOP3A-217ENST00000584582 PRO0628Q9UI54 55 aa6.86□□□□□ -1.31
TOP3A-217ENST00000584582 TRAV22A0A0B4J277 110 aa6.84□□□□□ -1.31
TOP3A-217ENST00000584582 PLA2G1BP04054 148 aaKnown RBP6.83□□□□□ -1.32
TOP3A-217ENST00000584582 DNAH10Q8IVF4 4471 aa6.83□□□□□ -1.32
TOP3A-217ENST00000584582 ATP5EP56381 51 aaPredicted RBP6.82□□□□□ -1.32
TOP3A-217ENST00000584582 C8orf17Q9NRJ1 99 aa6.82□□□□□ -1.32
TOP3A-217ENST00000584582 FP248Q71RG6 208 aaPredicted RBP6.81□□□□□ -1.32
TOP3A-217ENST00000584582 FAM229BQ4G0N7 80 aa6.81□□□□□ -1.32
TOP3A-217ENST00000584582 C1orf195Q5TG92 126 aa6.81□□□□□ -1.32
TOP3A-217ENST00000584582 Q6ZR54 194 aa6.81□□□□□ -1.32
TOP3A-217ENST00000584582 CHKB-CPT1BH3BT56 60 aa6.8□□□□□ -1.32
TOP3A-217ENST00000584582 LINC00472Q9H8W2 130 aa6.8□□□□□ -1.32
TOP3A-217ENST00000584582 LYSTQ99698 3801 aa6.8□□□□□ -1.32
TOP3A-217ENST00000584582 IGKV2D-30A0A075B6S6 120 aa6.79□□□□□ -1.32
TOP3A-217ENST00000584582 IGKV2-30P06310 120 aa6.79□□□□□ -1.32
TOP3A-217ENST00000584582 KRTAP10-1P60331 282 aa6.79□□□□□ -1.32
TOP3A-217ENST00000584582 PLAC8Q9NZF1 115 aa6.79□□□□□ -1.32
TOP3A-217ENST00000584582 A0A1B0GVX0 72 aa6.78□□□□□ -1.32
TOP3A-217ENST00000584582 TYMSOSQ8TAI1 123 aa6.78□□□□□ -1.32
TOP3A-217ENST00000584582 A0A087X002 238 aa6.77□□□□□ -1.33
TOP3A-217ENST00000584582 NOTCH2NLQ7Z3S9 236 aa6.77□□□□□ -1.33
TOP3A-217ENST00000584582 SPTSSBQ8NFR3 76 aa6.77□□□□□ -1.33
TOP3A-217ENST00000584582 IGLV8-61A0A075B6I0 122 aa6.77□□□□□ -1.33
TOP3A-217ENST00000584582 SPRR1BP22528 89 aa6.77□□□□□ -1.33
TOP3A-217ENST00000584582 MRPL34Q9BQ48 92 aaKnown RBP6.77□□□□□ -1.33
TOP3A-217ENST00000584582 MMP24-AS1A0A0U1RRL7 71 aa6.75□□□□□ -1.33
TOP3A-217ENST00000584582 PRR15LQ9BU68 103 aa6.75□□□□□ -1.33
TOP3A-217ENST00000584582 V9GYY9 64 aa6.75□□□□□ -1.33
TOP3A-217ENST00000584582 LINC00313P59037 77 aa6.74□□□□□ -1.33
TOP3A-217ENST00000584582 SPAG11AQ6PDA7 123 aa6.74□□□□□ -1.33
TOP3A-217ENST00000584582 SPINK1P00995 79 aa6.74□□□□□ -1.33
TOP3A-217ENST00000584582 A8MUN3 132 aa6.72□□□□□ -1.33
TOP3A-217ENST00000584582 KRTAP13-1Q8IUC0 172 aa6.71□□□□□ -1.34
TOP3A-217ENST00000584582 PRR26Q8N8Z3 221 aa6.7□□□□□ -1.34
TOP3A-217ENST00000584582 A6NED7 52 aa6.7□□□□□ -1.34
TOP3A-217ENST00000584582 SEC61GP60059 68 aa6.7□□□□□ -1.34
TOP3A-217ENST00000584582 Q96NJ1 140 aa6.7□□□□□ -1.34
TOP3A-217ENST00000584582 DNHD1Q96M86 4753 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms