RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 DNAL4O96015 105 aa12.07□□□□□ -0.48
SRSF1-206ENST00000583741 LCE2AQ5TA79 106 aaPredicted RBP12.07□□□□□ -0.48
SRSF1-206ENST00000583741 KRTAP13-1Q8IUC0 172 aa12.06□□□□□ -0.48
SRSF1-206ENST00000583741 HIGD2AQ9BW72 106 aa12.06□□□□□ -0.48
SRSF1-206ENST00000583741 SMCR5Q8TEV8 140 aa12.05□□□□□ -0.48
SRSF1-206ENST00000583741 A0A087X002 238 aa12.03□□□□□ -0.48
SRSF1-206ENST00000583741 Q6ZQY7 126 aa12.02□□□□□ -0.49
SRSF1-206ENST00000583741 C9JAW5 83 aa12.01□□□□□ -0.49
SRSF1-206ENST00000583741 ERC2-IT1O76042 136 aa12.01□□□□□ -0.49
SRSF1-206ENST00000583741 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12□□□□□ -0.49
SRSF1-206ENST00000583741 UBE2V1Q13404 147 aa11.99□□□□□ -0.49
SRSF1-206ENST00000583741 ORMDL1Q9P0S3 153 aa11.98□□□□□ -0.49
SRSF1-206ENST00000583741 MTURNQ8N3F0 131 aa11.97□□□□□ -0.49
SRSF1-206ENST00000583741 OCIAD2Q56VL3 154 aa11.95□□□□□ -0.5
SRSF1-206ENST00000583741 MUC17Q685J3 4493 aa11.95□□□□□ -0.5
SRSF1-206ENST00000583741 ST20-AS1Q8NBB2 130 aa11.95□□□□□ -0.5
SRSF1-206ENST00000583741 TYMSOSQ8TAI1 123 aa11.95□□□□□ -0.5
SRSF1-206ENST00000583741 CRYGAP11844 174 aa11.94□□□□□ -0.5
SRSF1-206ENST00000583741 KRTAP9-6A0A140TA67 174 aa11.93□□□□□ -0.5
SRSF1-206ENST00000583741 GHRHP01286 108 aa11.93□□□□□ -0.5
SRSF1-206ENST00000583741 BAALC-AS2P0C853 105 aa11.93□□□□□ -0.5
SRSF1-206ENST00000583741 PRO0461Q9UI25 63 aa11.93□□□□□ -0.5
SRSF1-206ENST00000583741 DEFB105AQ8NG35 78 aa11.92□□□□□ -0.5
SRSF1-206ENST00000583741 RETNLBQ9BQ08 111 aa11.92□□□□□ -0.5
SRSF1-206ENST00000583741 ANAPC11Q9NYG5 84 aa11.92□□□□□ -0.5
SRSF1-206ENST00000583741 H3BT86 120 aa11.91□□□□□ -0.5
SRSF1-206ENST00000583741 IGLV5-48A0A075B6I7 105 aa11.9□□□□□ -0.5
SRSF1-206ENST00000583741 F8W1H4 67 aa11.9□□□□□ -0.5
SRSF1-206ENST00000583741 H3BQ85 93 aa11.9□□□□□ -0.5
SRSF1-206ENST00000583741 KRTAP13-2Q52LG2 175 aa11.9□□□□□ -0.5
SRSF1-206ENST00000583741 TMEM256-PLSCR3K7ERE1 68 aa11.89□□□□□ -0.51
SRSF1-206ENST00000583741 LINC01547P58512 204 aaPredicted RBP11.89□□□□□ -0.51
SRSF1-206ENST00000583741 ANKRD29Q8N6D5 301 aa11.89□□□□□ -0.51
SRSF1-206ENST00000583741 ZNF706Q9Y5V0 76 aaPredicted RBP11.89□□□□□ -0.51
SRSF1-206ENST00000583741 SMCPP49901 116 aaPredicted RBP11.89□□□□□ -0.51
SRSF1-206ENST00000583741 Q8N377 158 aa11.88□□□□□ -0.51
SRSF1-206ENST00000583741 PPDPFLQ8WWR9 84 aa11.88□□□□□ -0.51
SRSF1-206ENST00000583741 TEX49A0A1B0GTD5 131 aa11.87□□□□□ -0.51
SRSF1-206ENST00000583741 GAGE2AQ6NT46 116 aa11.87□□□□□ -0.51
SRSF1-206ENST00000583741 SPRR4Q96PI1 79 aa11.87□□□□□ -0.51
SRSF1-206ENST00000583741 SPRR1BP22528 89 aa11.83□□□□□ -0.52
SRSF1-206ENST00000583741 TPRXLQ17RH7 258 aa11.82□□□□□ -0.52
SRSF1-206ENST00000583741 LINC00304Q8N9R0 145 aa11.82□□□□□ -0.52
SRSF1-206ENST00000583741 CDIP1Q9H305 208 aa11.82□□□□□ -0.52
SRSF1-206ENST00000583741 LINC00483Q53H64 154 aa11.81□□□□□ -0.52
SRSF1-206ENST00000583741 C3orf22Q8N5N4 141 aa11.81□□□□□ -0.52
SRSF1-206ENST00000583741 LAMTOR3Q9UHA4 124 aa11.81□□□□□ -0.52
SRSF1-206ENST00000583741 NDUFV3P56181 108 aaKnown RBP11.79□□□□□ -0.52
SRSF1-206ENST00000583741 FAM229BQ4G0N7 80 aa11.79□□□□□ -0.52
SRSF1-206ENST00000583741 SMIM29Q86T20 159 aa11.78□□□□□ -0.52
SRSF1-206ENST00000583741 ETDBQ3ZM63 59 aa11.77□□□□□ -0.52
SRSF1-206ENST00000583741 IGLV7-46A0A075B6I9 117 aa11.76□□□□□ -0.53
SRSF1-206ENST00000583741 A0A1B0GV72 72 aa11.76□□□□□ -0.53
SRSF1-206ENST00000583741 TEN1Q86WV5 123 aa11.76□□□□□ -0.53
SRSF1-206ENST00000583741 F8WEM9 126 aa11.75□□□□□ -0.53
SRSF1-206ENST00000583741 JMJD7-PLA2G4BH0Y9G9 81 aa11.74□□□□□ -0.53
SRSF1-206ENST00000583741 OBSCN-AS1Q96MR7 158 aa11.71□□□□□ -0.53
SRSF1-206ENST00000583741 RBM3P98179 157 aaKnown RBP11.7□□□□□ -0.54
SRSF1-206ENST00000583741 IGLV9-49A0A0B4J1Y8 123 aa11.7□□□□□ -0.54
SRSF1-206ENST00000583741 C14orf132Q9NPU4 83 aa11.68□□□□□ -0.54
SRSF1-206ENST00000583741 C9orf153Q5TBE3 101 aa11.67□□□□□ -0.54
SRSF1-206ENST00000583741 IGLV8-61A0A075B6I0 122 aa11.66□□□□□ -0.54
SRSF1-206ENST00000583741 DSCR8Q96T75 97 aa11.66□□□□□ -0.54
SRSF1-206ENST00000583741 MOBPQ13875 183 aa11.64□□□□□ -0.55
SRSF1-206ENST00000583741 TRBV7-4A0A0J9YYF1 115 aa11.63□□□□□ -0.55
SRSF1-206ENST00000583741 Q8NBF4 154 aa11.63□□□□□ -0.55
SRSF1-206ENST00000583741 Q6JHZ5 121 aa11.62□□□□□ -0.55
SRSF1-206ENST00000583741 LOC110117498A0A087WWA1 95 aa11.61□□□□□ -0.55
SRSF1-206ENST00000583741 PDE6GP18545 87 aa11.6□□□□□ -0.55
SRSF1-206ENST00000583741 IGFL1Q6UW32 110 aa11.6□□□□□ -0.55
SRSF1-206ENST00000583741 Q6ZQT0 140 aa11.59□□□□□ -0.55
SRSF1-206ENST00000583741 FSIP2Q5CZC0 6907 aa11.58□□□□□ -0.56
SRSF1-206ENST00000583741 A0A0G2JQZ4 141 aa11.57□□□□□ -0.56
SRSF1-206ENST00000583741 KRTAP13-3Q3SY46 172 aa11.57□□□□□ -0.56
SRSF1-206ENST00000583741 SSBP3-AS1Q7Z2R9 100 aa11.57□□□□□ -0.56
SRSF1-206ENST00000583741 CCKP06307 115 aa11.56□□□□□ -0.56
SRSF1-206ENST00000583741 SPAG11AQ6PDA7 123 aa11.56□□□□□ -0.56
SRSF1-206ENST00000583741 FP248Q71RG6 208 aaPredicted RBP11.56□□□□□ -0.56
SRSF1-206ENST00000583741 VPS25Q9BRG1 176 aa11.55□□□□□ -0.56
SRSF1-206ENST00000583741 KRTAP4-1Q9BYQ7 146 aa11.55□□□□□ -0.56
SRSF1-206ENST00000583741 C21orf62-AS1Q17RA5 79 aa11.54□□□□□ -0.56
SRSF1-206ENST00000583741 ASB16-AS1Q495Z4 193 aa11.54□□□□□ -0.56
SRSF1-206ENST00000583741 A0A1W2PNM2 257 aa11.52□□□□□ -0.56
SRSF1-206ENST00000583741 LCE2DQ5TA82 110 aaPredicted RBP11.51□□□□□ -0.57
SRSF1-206ENST00000583741 J3QR89 54 aa11.5□□□□□ -0.57
SRSF1-206ENST00000583741 C4orf48Q5BLP8 95 aa11.47□□□□□ -0.57
SRSF1-206ENST00000583741 Q6Q795 121 aa11.47□□□□□ -0.57
SRSF1-206ENST00000583741 HRCT1Q6UXD1 115 aa11.45□□□□□ -0.58
SRSF1-206ENST00000583741 K7ERU9 68 aa11.44□□□□□ -0.58
SRSF1-206ENST00000583741 CD164Q04900 197 aa11.44□□□□□ -0.58
SRSF1-206ENST00000583741 CRCT1Q9UGL9 99 aa11.44□□□□□ -0.58
SRSF1-206ENST00000583741 FAM240AA0A1B0GVK7 77 aa11.43□□□□□ -0.58
SRSF1-206ENST00000583741 A0A1B0GW54 56 aa11.43□□□□□ -0.58
SRSF1-206ENST00000583741 TRBV7-7A0A0K0K1E9 115 aa11.42□□□□□ -0.58
SRSF1-206ENST00000583741 SEC61BP60468 96 aaKnown RBP11.42□□□□□ -0.58
SRSF1-206ENST00000583741 ACYP1P07311 99 aa11.41□□□□□ -0.58
SRSF1-206ENST00000583741 A0A087WSZ3 146 aa11.4□□□□□ -0.58
SRSF1-206ENST00000583741 SPINK1P00995 79 aa11.4□□□□□ -0.58
SRSF1-206ENST00000583741 LINC00846Q9NV44 126 aa11.37□□□□□ -0.59
SRSF1-206ENST00000583741 LCE2CQ5TA81 110 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms