RNA–Protein interactions for RNA: ENST00000583013.1

KPNB1-213, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-213ENST00000583013 SPATA45Q537H7 98 aa4.6□□□□□ -1.67
KPNB1-213ENST00000583013 C9orf153Q5TBE3 101 aa4.6□□□□□ -1.67
KPNB1-213ENST00000583013 FP248Q71RG6 208 aaPredicted RBP4.6□□□□□ -1.67
KPNB1-213ENST00000583013 HIST1H4GQ99525 98 aa4.6□□□□□ -1.67
KPNB1-213ENST00000583013 VAMP8Q9BV40 100 aa4.6□□□□□ -1.67
KPNB1-213ENST00000583013 PAM16Q9Y3D7 125 aa4.6□□□□□ -1.67
KPNB1-213ENST00000583013 IGLV7-46A0A075B6I9 117 aa4.59□□□□□ -1.67
KPNB1-213ENST00000583013 TEX49A0A1B0GTD5 131 aa4.59□□□□□ -1.67
KPNB1-213ENST00000583013 C14orf144Q96I85 54 aa4.59□□□□□ -1.67
KPNB1-213ENST00000583013 NHP2Q9NX24 153 aaKnown RBP4.59□□□□□ -1.67
KPNB1-213ENST00000583013 HIGD1BQ9P298 99 aa4.59□□□□□ -1.67
KPNB1-213ENST00000583013 LAMTOR3Q9UHA4 124 aa4.59□□□□□ -1.67
KPNB1-213ENST00000583013 LINC01547P58512 204 aaPredicted RBP4.58□□□□□ -1.68
KPNB1-213ENST00000583013 VAMP3Q15836 100 aa4.58□□□□□ -1.68
KPNB1-213ENST00000583013 TAL2Q16559 108 aa4.58□□□□□ -1.68
KPNB1-213ENST00000583013 Q8N377 158 aa4.58□□□□□ -1.68
KPNB1-213ENST00000583013 C2orf91Q6ZV80 131 aa4.57□□□□□ -1.68
KPNB1-213ENST00000583013 SMIM29Q86T20 159 aa4.57□□□□□ -1.68
KPNB1-213ENST00000583013 SLC25A20O43772 301 aa4.56□□□□□ -1.68
KPNB1-213ENST00000583013 Q1RN00 199 aa4.56□□□□□ -1.68
KPNB1-213ENST00000583013 PYY3Q5JQD4 70 aa4.56□□□□□ -1.68
KPNB1-213ENST00000583013 LINC00575Q6W349 94 aa4.56□□□□□ -1.68
KPNB1-213ENST00000583013 DEFB105AQ8NG35 78 aa4.56□□□□□ -1.68
KPNB1-213ENST00000583013 C12orf57Q99622 126 aa4.56□□□□□ -1.68
KPNB1-213ENST00000583013 A0A0B4J2C4 111 aa4.55□□□□□ -1.68
KPNB1-213ENST00000583013 CD164Q04900 197 aa4.55□□□□□ -1.68
KPNB1-213ENST00000583013 KRTAP15-1Q3LI76 137 aa4.55□□□□□ -1.68
KPNB1-213ENST00000583013 BVES-AS1Q5T3Y7 98 aa4.55□□□□□ -1.68
KPNB1-213ENST00000583013 MUC2Q02817 5179 aa4.54□□□□□ -1.68
KPNB1-213ENST00000583013 hADV29S1A0JD25 119 aa4.54□□□□□ -1.68
KPNB1-213ENST00000583013 CFC1BP0CG36 223 aa4.54□□□□□ -1.68
KPNB1-213ENST00000583013 CFC1P0CG37 223 aa4.54□□□□□ -1.68
KPNB1-213ENST00000583013 KRTAP13-3Q3SY46 172 aa4.54□□□□□ -1.68
KPNB1-213ENST00000583013 LIMD2Q9BT23 127 aa4.54□□□□□ -1.68
KPNB1-213ENST00000583013 PRO1933Q9H354 126 aa4.54□□□□□ -1.68
KPNB1-213ENST00000583013 Q6ZQY7 126 aa4.53□□□□□ -1.68
KPNB1-213ENST00000583013 CEND1Q8N111 149 aa4.53□□□□□ -1.68
KPNB1-213ENST00000583013 RAB37Q96AX2 223 aa4.53□□□□□ -1.68
KPNB1-213ENST00000583013 MUC17Q685J3 4493 aa4.52□□□□□ -1.69
KPNB1-213ENST00000583013 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.52□□□□□ -1.69
KPNB1-213ENST00000583013 H7C2G1 150 aa4.51□□□□□ -1.69
KPNB1-213ENST00000583013 Q5XG85 94 aa4.51□□□□□ -1.69
KPNB1-213ENST00000583013 HRCT1Q6UXD1 115 aa4.51□□□□□ -1.69
KPNB1-213ENST00000583013 PPDPFLQ8WWR9 84 aa4.51□□□□□ -1.69
KPNB1-213ENST00000583013 IGLV8-61A0A075B6I0 122 aa4.5□□□□□ -1.69
KPNB1-213ENST00000583013 F8WEM9 126 aa4.5□□□□□ -1.69
KPNB1-213ENST00000583013 H0YGX0 51 aa4.5□□□□□ -1.69
KPNB1-213ENST00000583013 FXYD2P54710 66 aa4.5□□□□□ -1.69
KPNB1-213ENST00000583013 PRO1854Q9UHT4 67 aa4.5□□□□□ -1.69
KPNB1-213ENST00000583013 HSD52Q0P140 79 aa4.49□□□□□ -1.69
KPNB1-213ENST00000583013 A0A0G2JQZ4 141 aa4.48□□□□□ -1.69
KPNB1-213ENST00000583013 SNCGO76070 127 aa4.48□□□□□ -1.69
KPNB1-213ENST00000583013 OCIAD2Q56VL3 154 aa4.48□□□□□ -1.69
KPNB1-213ENST00000583013 Q6JHZ5 121 aa4.48□□□□□ -1.69
KPNB1-213ENST00000583013 UQCR10Q9UDW1 63 aa4.48□□□□□ -1.69
KPNB1-213ENST00000583013 A0A1B0GX51 115 aa4.47□□□□□ -1.69
KPNB1-213ENST00000583013 CLEC2BQ92478 149 aa4.47□□□□□ -1.69
KPNB1-213ENST00000583013 FAM218AQ96MZ4 157 aa4.47□□□□□ -1.69
KPNB1-213ENST00000583013 TRIAP1O43715 76 aa4.46□□□□□ -1.7
KPNB1-213ENST00000583013 ASB16-AS1Q495Z4 193 aa4.46□□□□□ -1.7
KPNB1-213ENST00000583013 IGFL1Q6UW32 110 aa4.46□□□□□ -1.7
KPNB1-213ENST00000583013 A0A0U1RQV1 116 aa4.45□□□□□ -1.7
KPNB1-213ENST00000583013 TCL1BO95988 128 aa4.45□□□□□ -1.7
KPNB1-213ENST00000583013 C1orf195Q5TG92 126 aa4.45□□□□□ -1.7
KPNB1-213ENST00000583013 SNHG12Q9BXW3 62 aa4.45□□□□□ -1.7
KPNB1-213ENST00000583013 TRBV7-7A0A0K0K1E9 115 aa4.44□□□□□ -1.7
KPNB1-213ENST00000583013 K7ERJ3 54 aa4.44□□□□□ -1.7
KPNB1-213ENST00000583013 SEC61BP60468 96 aaKnown RBP4.44□□□□□ -1.7
KPNB1-213ENST00000583013 H3BUT2 72 aa4.42□□□□□ -1.7
KPNB1-213ENST00000583013 NDUFV3P56181 108 aaKnown RBP4.42□□□□□ -1.7
KPNB1-213ENST00000583013 C9orf92A6NGG3 77 aa4.41□□□□□ -1.7
KPNB1-213ENST00000583013 COX6CP09669 75 aa4.41□□□□□ -1.7
KPNB1-213ENST00000583013 SMIM6P0DI80 62 aa4.41□□□□□ -1.7
KPNB1-213ENST00000583013 PSMB2P49721 201 aa4.41□□□□□ -1.7
KPNB1-213ENST00000583013 Q6Q795 121 aa4.41□□□□□ -1.7
KPNB1-213ENST00000583013 H3BQ85 93 aa4.4□□□□□ -1.71
KPNB1-213ENST00000583013 DNAL4O96015 105 aa4.4□□□□□ -1.71
KPNB1-213ENST00000583013 H3BMG7 143 aa4.39□□□□□ -1.71
KPNB1-213ENST00000583013 FABP2P12104 132 aa4.39□□□□□ -1.71
KPNB1-213ENST00000583013 TEN1Q86WV5 123 aa4.39□□□□□ -1.71
KPNB1-213ENST00000583013 ORMDL1Q9P0S3 153 aa4.39□□□□□ -1.71
KPNB1-213ENST00000583013 FAT4Q6V0I7 4981 aa4.39□□□□□ -1.71
KPNB1-213ENST00000583013 KRTAP4-1Q9BYQ7 146 aa4.38□□□□□ -1.71
KPNB1-213ENST00000583013 SS18L2Q9UHA2 77 aa4.38□□□□□ -1.71
KPNB1-213ENST00000583013 TMEM256-PLSCR3K7ERE1 68 aa4.37□□□□□ -1.71
KPNB1-213ENST00000583013 M0R143 59 aa4.37□□□□□ -1.71
KPNB1-213ENST00000583013 LST1O00453 97 aa4.37□□□□□ -1.71
KPNB1-213ENST00000583013 TRACP01848 142 aa4.37□□□□□ -1.71
KPNB1-213ENST00000583013 A0A087WSZ3 146 aa4.35□□□□□ -1.71
KPNB1-213ENST00000583013 A0A1W2PNM2 257 aa4.35□□□□□ -1.71
KPNB1-213ENST00000583013 RPL37P61927 97 aaKnown RBP4.35□□□□□ -1.71
KPNB1-213ENST00000583013 UBE2V1Q13404 147 aa4.35□□□□□ -1.71
KPNB1-213ENST00000583013 PCOTHQ58A44 107 aa4.35□□□□□ -1.71
KPNB1-213ENST00000583013 TRBV7-4A0A0J9YYF1 115 aa4.34□□□□□ -1.71
KPNB1-213ENST00000583013 SCGB1C2P0DMR2 95 aa4.34□□□□□ -1.71
KPNB1-213ENST00000583013 ANKRD29Q8N6D5 301 aa4.34□□□□□ -1.71
KPNB1-213ENST00000583013 LOC105371267A0A1B0GV96 52 aa4.33□□□□□ -1.72
KPNB1-213ENST00000583013 TSTD3H0UI37 97 aa4.33□□□□□ -1.72
KPNB1-213ENST00000583013 Q96NJ1 140 aa4.33□□□□□ -1.72
KPNB1-213ENST00000583013 A0A1B0GV72 72 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms