RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 PYY3Q5JQD4 70 aa9.13□□□□□ -0.95
VAPA-204ENST00000577901 C2orf91Q6ZV80 131 aa9.11□□□□□ -0.95
VAPA-204ENST00000577901 RPS29P62273 56 aaKnown RBP9.1□□□□□ -0.95
VAPA-204ENST00000577901 RAB37Q96AX2 223 aa9.1□□□□□ -0.95
VAPA-204ENST00000577901 IGLV5-48A0A075B6I7 105 aa9.09□□□□□ -0.95
VAPA-204ENST00000577901 CFC1BP0CG36 223 aa9.08□□□□□ -0.96
VAPA-204ENST00000577901 CFC1P0CG37 223 aa9.08□□□□□ -0.96
VAPA-204ENST00000577901 Q1RN00 199 aa9.08□□□□□ -0.96
VAPA-204ENST00000577901 BVES-AS1Q5T3Y7 98 aa9.08□□□□□ -0.96
VAPA-204ENST00000577901 LINC00575Q6W349 94 aa9.08□□□□□ -0.96
VAPA-204ENST00000577901 hADV29S1A0JD25 119 aa9.07□□□□□ -0.96
VAPA-204ENST00000577901 CEND1Q8N111 149 aa9.07□□□□□ -0.96
VAPA-204ENST00000577901 A0A0B4J2C4 111 aa9.06□□□□□ -0.96
VAPA-204ENST00000577901 TMEM238LA0A1B0GVL6 79 aa9.06□□□□□ -0.96
VAPA-204ENST00000577901 A6NJY4 79 aa9.06□□□□□ -0.96
VAPA-204ENST00000577901 H7C2G1 150 aa9.06□□□□□ -0.96
VAPA-204ENST00000577901 FP248Q71RG6 208 aaPredicted RBP9.06□□□□□ -0.96
VAPA-204ENST00000577901 KRTAP4-7Q9BYR0 210 aa9.06□□□□□ -0.96
VAPA-204ENST00000577901 LINC01547P58512 204 aaPredicted RBP9.05□□□□□ -0.96
VAPA-204ENST00000577901 PRO1933Q9H354 126 aa9.05□□□□□ -0.96
VAPA-204ENST00000577901 SMIM29Q86T20 159 aa9.04□□□□□ -0.96
VAPA-204ENST00000577901 Q8N377 158 aa9.04□□□□□ -0.96
VAPA-204ENST00000577901 SNCGO76070 127 aa9.01□□□□□ -0.97
VAPA-204ENST00000577901 HRCT1Q6UXD1 115 aa9.01□□□□□ -0.97
VAPA-204ENST00000577901 Q6ZQY7 126 aa9.01□□□□□ -0.97
VAPA-204ENST00000577901 PRO1854Q9UHT4 67 aa9.01□□□□□ -0.97
VAPA-204ENST00000577901 CD164Q04900 197 aa9□□□□□ -0.97
VAPA-204ENST00000577901 HSD52Q0P140 79 aa9□□□□□ -0.97
VAPA-204ENST00000577901 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9□□□□□ -0.97
VAPA-204ENST00000577901 LIMD2Q9BT23 127 aa9□□□□□ -0.97
VAPA-204ENST00000577901 UQCR10Q9UDW1 63 aa9□□□□□ -0.97
VAPA-204ENST00000577901 F8WEM9 126 aa8.99□□□□□ -0.97
VAPA-204ENST00000577901 H0YGX0 51 aa8.99□□□□□ -0.97
VAPA-204ENST00000577901 KRTAP13-3Q3SY46 172 aa8.99□□□□□ -0.97
VAPA-204ENST00000577901 LCE1DQ5T752 114 aa8.99□□□□□ -0.97
VAPA-204ENST00000577901 FXYD2P54710 66 aa8.98□□□□□ -0.97
VAPA-204ENST00000577901 ASB16-AS1Q495Z4 193 aa8.97□□□□□ -0.97
VAPA-204ENST00000577901 PPDPFLQ8WWR9 84 aa8.96□□□□□ -0.98
VAPA-204ENST00000577901 OCIAD2Q56VL3 154 aa8.93□□□□□ -0.98
VAPA-204ENST00000577901 SNHG12Q9BXW3 62 aa8.93□□□□□ -0.98
VAPA-204ENST00000577901 KRTAP4-1Q9BYQ7 146 aa8.92□□□□□ -0.98
VAPA-204ENST00000577901 A0A1B0GX51 115 aa8.91□□□□□ -0.98
VAPA-204ENST00000577901 GHRHP01286 108 aa8.91□□□□□ -0.98
VAPA-204ENST00000577901 SEC61BP60468 96 aaKnown RBP8.91□□□□□ -0.98
VAPA-204ENST00000577901 Q6JHZ5 121 aa8.91□□□□□ -0.98
VAPA-204ENST00000577901 FSIP2Q5CZC0 6907 aa8.9□□□□□ -0.98
VAPA-204ENST00000577901 A0A0G2JQZ4 141 aa8.9□□□□□ -0.98
VAPA-204ENST00000577901 FAM218AQ96MZ4 157 aa8.9□□□□□ -0.98
VAPA-204ENST00000577901 TRIAP1O43715 76 aa8.89□□□□□ -0.99
VAPA-204ENST00000577901 PSMB2P49721 201 aa8.89□□□□□ -0.99
VAPA-204ENST00000577901 Q5XG85 94 aa8.89□□□□□ -0.99
VAPA-204ENST00000577901 IGLV8-61A0A075B6I0 122 aa8.88□□□□□ -0.99
VAPA-204ENST00000577901 K7ERJ3 54 aa8.88□□□□□ -0.99
VAPA-204ENST00000577901 COX6CP09669 75 aa8.87□□□□□ -0.99
VAPA-204ENST00000577901 TCL1BO95988 128 aa8.86□□□□□ -0.99
VAPA-204ENST00000577901 CLEC2BQ92478 149 aa8.86□□□□□ -0.99
VAPA-204ENST00000577901 SMIM6P0DI80 62 aa8.85□□□□□ -0.99
VAPA-204ENST00000577901 IGFL1Q6UW32 110 aa8.85□□□□□ -0.99
VAPA-204ENST00000577901 LOC105371267A0A1B0GV96 52 aa8.83□□□□□ -1
VAPA-204ENST00000577901 DNAL4O96015 105 aa8.83□□□□□ -1
VAPA-204ENST00000577901 NDUFV3P56181 108 aaKnown RBP8.83□□□□□ -1
VAPA-204ENST00000577901 FABP2P12104 132 aa8.82□□□□□ -1
VAPA-204ENST00000577901 TRBV7-7A0A0K0K1E9 115 aa8.81□□□□□ -1
VAPA-204ENST00000577901 H3BUT2 72 aa8.81□□□□□ -1
VAPA-204ENST00000577901 C1orf195Q5TG92 126 aa8.81□□□□□ -1
VAPA-204ENST00000577901 H3BQ85 93 aa8.8□□□□□ -1
VAPA-204ENST00000577901 M0R143 59 aa8.79□□□□□ -1
VAPA-204ENST00000577901 SCGB1C2P0DMR2 95 aa8.79□□□□□ -1
VAPA-204ENST00000577901 ORMDL1Q9P0S3 153 aa8.79□□□□□ -1
VAPA-204ENST00000577901 CRCT1Q9UGL9 99 aa8.79□□□□□ -1
VAPA-204ENST00000577901 H3BMG7 143 aa8.78□□□□□ -1
VAPA-204ENST00000577901 KRTAP4-9Q9BYQ8 210 aa8.78□□□□□ -1
VAPA-204ENST00000577901 TMEM256-PLSCR3K7ERE1 68 aa8.76□□□□□ -1.01
VAPA-204ENST00000577901 TSTD3H0UI37 97 aa8.75□□□□□ -1.01
VAPA-204ENST00000577901 C9orf92A6NGG3 77 aa8.74□□□□□ -1.01
VAPA-204ENST00000577901 Q6Q795 121 aa8.74□□□□□ -1.01
VAPA-204ENST00000577901 TEN1Q86WV5 123 aa8.74□□□□□ -1.01
VAPA-204ENST00000577901 TRACP01848 142 aa8.72□□□□□ -1.01
VAPA-204ENST00000577901 LST1O00453 97 aa8.71□□□□□ -1.02
VAPA-204ENST00000577901 SS18L2Q9UHA2 77 aa8.71□□□□□ -1.02
VAPA-204ENST00000577901 UBE2V1Q13404 147 aa8.69□□□□□ -1.02
VAPA-204ENST00000577901 KRTAP19-2Q3LHN2 52 aa8.69□□□□□ -1.02
VAPA-204ENST00000577901 ANKRD29Q8N6D5 301 aa8.69□□□□□ -1.02
VAPA-204ENST00000577901 MT1HP80294 61 aa8.67□□□□□ -1.02
VAPA-204ENST00000577901 KRTAP4-2Q9BYR5 136 aa8.67□□□□□ -1.02
VAPA-204ENST00000577901 A0A087WSZ3 146 aa8.66□□□□□ -1.02
VAPA-204ENST00000577901 PCOTHQ58A44 107 aa8.66□□□□□ -1.02
VAPA-204ENST00000577901 A0A1B0GV72 72 aa8.65□□□□□ -1.02
VAPA-204ENST00000577901 A0A1W2PNM2 257 aa8.64□□□□□ -1.03
VAPA-204ENST00000577901 ATXN8Q156A1 80 aa8.64□□□□□ -1.03
VAPA-204ENST00000577901 TRBV7-4A0A0J9YYF1 115 aa8.63□□□□□ -1.03
VAPA-204ENST00000577901 BAALC-AS2P0C853 105 aa8.63□□□□□ -1.03
VAPA-204ENST00000577901 BATFQ16520 125 aa8.63□□□□□ -1.03
VAPA-204ENST00000577901 NAA38Q9BRA0 125 aaKnown RBP8.63□□□□□ -1.03
VAPA-204ENST00000577901 RBM3P98179 157 aaKnown RBP8.61□□□□□ -1.03
VAPA-204ENST00000577901 LYRM7Q5U5X0 104 aa8.61□□□□□ -1.03
VAPA-204ENST00000577901 CCKP06307 115 aa8.6□□□□□ -1.03
VAPA-204ENST00000577901 DSCR8Q96T75 97 aa8.59□□□□□ -1.03
VAPA-204ENST00000577901 RPL37P61927 97 aaKnown RBP8.58□□□□□ -1.04
VAPA-204ENST00000577901 TRBV20-1A0A075B6N2 111 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 302.6 ms