RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 C9orf163Q8N9P6 203 aa8.3□□□□□ -1.08
PCDHGB3-201ENST00000576222 SPRR1AP35321 89 aa8.29□□□□□ -1.08
PCDHGB3-201ENST00000576222 CNBPP62633 177 aaKnown RBP8.29□□□□□ -1.08
PCDHGB3-201ENST00000576222 EYSQ5T1H1 3165 aa8.29□□□□□ -1.08
PCDHGB3-201ENST00000576222 BOD1L1Q8NFC6 3051 aa8.29□□□□□ -1.08
PCDHGB3-201ENST00000576222 KRTAP1-1Q07627 177 aa8.28□□□□□ -1.08
PCDHGB3-201ENST00000576222 USP34Q70CQ2 3546 aa8.28□□□□□ -1.08
PCDHGB3-201ENST00000576222 TACC2O95359 2948 aa8.27□□□□□ -1.09
PCDHGB3-201ENST00000576222 ANAPC11Q9NYG5 84 aa8.25□□□□□ -1.09
PCDHGB3-201ENST00000576222 ZNF861PO60384 105 aa8.24□□□□□ -1.09
PCDHGB3-201ENST00000576222 LINC01558Q9Y6Z2 57 aa8.24□□□□□ -1.09
PCDHGB3-201ENST00000576222 MMP24-AS1A0A0U1RRL7 71 aa8.22□□□□□ -1.09
PCDHGB3-201ENST00000576222 SSBP3-AS1Q7Z2R9 100 aa8.21□□□□□ -1.09
PCDHGB3-201ENST00000576222 Q96NJ1 140 aa8.21□□□□□ -1.09
PCDHGB3-201ENST00000576222 MAST4O15021 2626 aa8.21□□□□□ -1.1
PCDHGB3-201ENST00000576222 LRBAP50851 2863 aa8.2□□□□□ -1.1
PCDHGB3-201ENST00000576222 COL6A3P12111 3177 aa8.2□□□□□ -1.1
PCDHGB3-201ENST00000576222 TEX15Q9BXT5 2789 aa8.19□□□□□ -1.1
PCDHGB3-201ENST00000576222 TNP2Q05952 138 aa8.19□□□□□ -1.1
PCDHGB3-201ENST00000576222 KRTAP26-1Q6PEX3 210 aa8.18□□□□□ -1.1
PCDHGB3-201ENST00000576222 ITPR1Q14643 2758 aa8.18□□□□□ -1.1
PCDHGB3-201ENST00000576222 HELZ2Q9BYK8 2649 aaKnown RBP8.17□□□□□ -1.1
PCDHGB3-201ENST00000576222 K7EIL1 84 aa8.17□□□□□ -1.1
PCDHGB3-201ENST00000576222 MYO15AQ9UKN7 3530 aa8.17□□□□□ -1.1
PCDHGB3-201ENST00000576222 LINC00472Q9H8W2 130 aa8.17□□□□□ -1.1
PCDHGB3-201ENST00000576222 PSORS1C2Q9UIG4 136 aa8.17□□□□□ -1.1
PCDHGB3-201ENST00000576222 ATMQ13315 3056 aa8.16□□□□□ -1.1
PCDHGB3-201ENST00000576222 CFAP47Q6ZTR5 3102 aa8.16□□□□□ -1.1
PCDHGB3-201ENST00000576222 TYMSOSQ8TAI1 123 aa8.16□□□□□ -1.1
PCDHGB3-201ENST00000576222 ZCCHC13Q8WW36 166 aaKnown RBP8.16□□□□□ -1.1
PCDHGB3-201ENST00000576222 HRES1P13985 223 aa8.14□□□□□ -1.11
PCDHGB3-201ENST00000576222 NOTCH1P46531 2555 aa8.14□□□□□ -1.11
PCDHGB3-201ENST00000576222 WWC2-AS2Q96NR7 200 aa8.14□□□□□ -1.11
PCDHGB3-201ENST00000576222 TNRC18O15417 2968 aaPredicted RBP8.13□□□□□ -1.11
PCDHGB3-201ENST00000576222 SPINK7P58062 85 aa8.12□□□□□ -1.11
PCDHGB3-201ENST00000576222 A0A087WTM6 91 aa8.11□□□□□ -1.11
PCDHGB3-201ENST00000576222 ZZEF1O43149 2961 aa8.11□□□□□ -1.11
PCDHGB3-201ENST00000576222 SETXQ7Z333 2677 aaKnown RBP8.11□□□□□ -1.11
PCDHGB3-201ENST00000576222 PRAC1Q96KF2 57 aa8.11□□□□□ -1.11
PCDHGB3-201ENST00000576222 DMXL2Q8TDJ6 3036 aa8.11□□□□□ -1.11
PCDHGB3-201ENST00000576222 SPRR1BP22528 89 aa8.11□□□□□ -1.11
PCDHGB3-201ENST00000576222 SPINT4Q6UDR6 99 aa8.1□□□□□ -1.11
PCDHGB3-201ENST00000576222 KRTAP4-16G5E9R7 235 aaPredicted RBP8.09□□□□□ -1.11
PCDHGB3-201ENST00000576222 ASH1LQ9NR48 2969 aaKnown RBP8.09□□□□□ -1.11
PCDHGB3-201ENST00000576222 LINC01554Q52M75 96 aa8.09□□□□□ -1.11
PCDHGB3-201ENST00000576222 IGLV7-43P04211 117 aa8.08□□□□□ -1.12
PCDHGB3-201ENST00000576222 PLA2G1BP04054 148 aaKnown RBP8.07□□□□□ -1.12
PCDHGB3-201ENST00000576222 UBR5O95071 2799 aaPredicted RBP8.07□□□□□ -1.12
PCDHGB3-201ENST00000576222 KRTAP29-1A8MX34 341 aaPredicted RBP8.07□□□□□ -1.12
PCDHGB3-201ENST00000576222 APLNQ9ULZ1 77 aa8.07□□□□□ -1.12
PCDHGB3-201ENST00000576222 NBEAL1Q6ZS30 2694 aa8.07□□□□□ -1.12
PCDHGB3-201ENST00000576222 LCE6AA0A183 80 aa8.04□□□□□ -1.12
PCDHGB3-201ENST00000576222 Q8N1X5 172 aa8.04□□□□□ -1.12
PCDHGB3-201ENST00000576222 COL6A5A8TX70 2615 aa8.04□□□□□ -1.12
PCDHGB3-201ENST00000576222 FLNCQ14315 2725 aa8.03□□□□□ -1.12
PCDHGB3-201ENST00000576222 COL12A1Q99715 3063 aa8.02□□□□□ -1.13
PCDHGB3-201ENST00000576222 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.02□□□□□ -1.13
PCDHGB3-201ENST00000576222 IGSF10Q6WRI0 2623 aa8□□□□□ -1.13
PCDHGB3-201ENST00000576222 LOC400499M0QZD8 3231 aa7.97□□□□□ -1.13
PCDHGB3-201ENST00000576222 BAHCC1Q9P281 2608 aa7.97□□□□□ -1.13
PCDHGB3-201ENST00000576222 WDFY3Q8IZQ1 3526 aa7.96□□□□□ -1.13
PCDHGB3-201ENST00000576222 Q6ZR54 194 aa7.95□□□□□ -1.14
PCDHGB3-201ENST00000576222 TEP1Q99973 2627 aaKnown RBP7.95□□□□□ -1.14
PCDHGB3-201ENST00000576222 LINC00304Q8N9R0 145 aa7.94□□□□□ -1.14
PCDHGB3-201ENST00000576222 Q5W150 140 aa7.94□□□□□ -1.14
PCDHGB3-201ENST00000576222 H3BS24 57 aa7.93□□□□□ -1.14
PCDHGB3-201ENST00000576222 STAB1Q9NY15 2570 aa7.93□□□□□ -1.14
PCDHGB3-201ENST00000576222 CSAG1Q6PB30 78 aa7.93□□□□□ -1.14
PCDHGB3-201ENST00000576222 CRIPTQ9P021 101 aa7.93□□□□□ -1.14
PCDHGB3-201ENST00000576222 C9orf92A6NGG3 77 aa7.92□□□□□ -1.14
PCDHGB3-201ENST00000576222 A8MU10 97 aa7.92□□□□□ -1.14
PCDHGB3-201ENST00000576222 KRTAP1-5Q9BYS1 174 aa7.92□□□□□ -1.14
PCDHGB3-201ENST00000576222 DMDP11532 3685 aa7.9□□□□□ -1.14
PCDHGB3-201ENST00000576222 ZANQ9Y493 2812 aa7.9□□□□□ -1.14
PCDHGB3-201ENST00000576222 A0A1B0GU33 70 aa7.9□□□□□ -1.15
PCDHGB3-201ENST00000576222 A6NN06 94 aa7.9□□□□□ -1.15
PCDHGB3-201ENST00000576222 DMXL1Q9Y485 3027 aa7.89□□□□□ -1.15
PCDHGB3-201ENST00000576222 DMAC1Q96GE9 116 aa7.87□□□□□ -1.15
PCDHGB3-201ENST00000576222 APCP25054 2843 aa7.87□□□□□ -1.15
PCDHGB3-201ENST00000576222 HRNRQ86YZ3 2850 aaPredicted RBP7.85□□□□□ -1.15
PCDHGB3-201ENST00000576222 KRTAP7-1Q8IUC3 87 aa7.85□□□□□ -1.15
PCDHGB3-201ENST00000576222 PLAC8Q9NZF1 115 aa7.85□□□□□ -1.15
PCDHGB3-201ENST00000576222 UTP20O75691 2785 aaKnown RBP7.84□□□□□ -1.15
PCDHGB3-201ENST00000576222 A0A0D9SG42 100 aa7.84□□□□□ -1.15
PCDHGB3-201ENST00000576222 J3QL48 77 aa7.83□□□□□ -1.16
PCDHGB3-201ENST00000576222 MUC3AQ02505 3323 aa7.82□□□□□ -1.16
PCDHGB3-201ENST00000576222 CELSR2Q9HCU4 2923 aa7.81□□□□□ -1.16
PCDHGB3-201ENST00000576222 ASB16-AS1Q495Z4 193 aa7.81□□□□□ -1.16
PCDHGB3-201ENST00000576222 LINC00483Q53H64 154 aa7.8□□□□□ -1.16
PCDHGB3-201ENST00000576222 NSD1Q96L73 2696 aaPredicted RBP7.8□□□□□ -1.16
PCDHGB3-201ENST00000576222 A0A087X002 238 aa7.79□□□□□ -1.16
PCDHGB3-201ENST00000576222 NOTCH2NLQ7Z3S9 236 aa7.79□□□□□ -1.16
PCDHGB3-201ENST00000576222 STAB2Q8WWQ8 2551 aa7.78□□□□□ -1.16
PCDHGB3-201ENST00000576222 PANO1I0J062 215 aa7.77□□□□□ -1.16
PCDHGB3-201ENST00000576222 KRTAP11-1Q8IUC1 163 aa7.77□□□□□ -1.17
PCDHGB3-201ENST00000576222 SPATA8Q6RVD6 105 aa7.77□□□□□ -1.17
PCDHGB3-201ENST00000576222 HIVEP1P15822 2718 aa7.76□□□□□ -1.17
PCDHGB3-201ENST00000576222 FBN2P35556 2912 aa7.75□□□□□ -1.17
PCDHGB3-201ENST00000576222 SMR3BP02814 79 aaPredicted RBP7.74□□□□□ -1.17
PCDHGB3-201ENST00000576222 NIPBLQ6KC79 2804 aaeCLIP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms