RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 COX7BP24311 80 aa7.94□□□□□ -1.14
RPAIN-216ENST00000575599 KRTAP13-1Q8IUC0 172 aa7.94□□□□□ -1.14
RPAIN-216ENST00000575599 H0YGX0 51 aa7.93□□□□□ -1.14
RPAIN-216ENST00000575599 FABP2P12104 132 aa7.93□□□□□ -1.14
RPAIN-216ENST00000575599 TRBV7-6A0A0J9YX20 115 aa7.92□□□□□ -1.14
RPAIN-216ENST00000575599 A0A1W2PPM0 123 aa7.91□□□□□ -1.14
RPAIN-216ENST00000575599 SLC25A20O43772 301 aa7.91□□□□□ -1.14
RPAIN-216ENST00000575599 KRTAP9-3Q9BYQ3 159 aa7.9□□□□□ -1.14
RPAIN-216ENST00000575599 SPRR1AP35321 89 aa7.89□□□□□ -1.15
RPAIN-216ENST00000575599 ELOF1P60002 83 aaKnown RBP7.88□□□□□ -1.15
RPAIN-216ENST00000575599 HIGD2AQ9BW72 106 aa7.88□□□□□ -1.15
RPAIN-216ENST00000575599 ANAPC11Q9NYG5 84 aa7.88□□□□□ -1.15
RPAIN-216ENST00000575599 TRBV20-1A0A075B6N2 111 aa7.87□□□□□ -1.15
RPAIN-216ENST00000575599 A0A087X002 238 aa7.87□□□□□ -1.15
RPAIN-216ENST00000575599 B5MCH6 92 aa7.87□□□□□ -1.15
RPAIN-216ENST00000575599 ATXN8Q156A1 80 aa7.87□□□□□ -1.15
RPAIN-216ENST00000575599 CLEC2BQ92478 149 aa7.87□□□□□ -1.15
RPAIN-216ENST00000575599 DHRS4-AS1Q9P1J3 65 aa7.87□□□□□ -1.15
RPAIN-216ENST00000575599 CRYGAP11844 174 aa7.86□□□□□ -1.15
RPAIN-216ENST00000575599 Q6ZRX8 168 aa7.86□□□□□ -1.15
RPAIN-216ENST00000575599 SPCS1Q9Y6A9 102 aa7.86□□□□□ -1.15
RPAIN-216ENST00000575599 KRTAP4-16G5E9R7 235 aaPredicted RBP7.85□□□□□ -1.15
RPAIN-216ENST00000575599 DNAL4O96015 105 aa7.85□□□□□ -1.15
RPAIN-216ENST00000575599 LINC00575Q6W349 94 aa7.85□□□□□ -1.15
RPAIN-216ENST00000575599 A0A1B0GX51 115 aa7.84□□□□□ -1.15
RPAIN-216ENST00000575599 hADV29S1A0JD25 119 aa7.84□□□□□ -1.15
RPAIN-216ENST00000575599 GTF2H5Q6ZYL4 71 aa7.84□□□□□ -1.15
RPAIN-216ENST00000575599 TCL1BO95988 128 aa7.84□□□□□ -1.16
RPAIN-216ENST00000575599 TYMSOSQ8TAI1 123 aa7.84□□□□□ -1.16
RPAIN-216ENST00000575599 LST1O00453 97 aa7.83□□□□□ -1.16
RPAIN-216ENST00000575599 FAM229BQ4G0N7 80 aa7.82□□□□□ -1.16
RPAIN-216ENST00000575599 FAM218AQ96MZ4 157 aa7.82□□□□□ -1.16
RPAIN-216ENST00000575599 A0A1B0GV90 55 aa7.81□□□□□ -1.16
RPAIN-216ENST00000575599 K7EP34 96 aa7.81□□□□□ -1.16
RPAIN-216ENST00000575599 TRACP01848 142 aa7.81□□□□□ -1.16
RPAIN-216ENST00000575599 KRTAP13-2Q52LG2 175 aa7.81□□□□□ -1.16
RPAIN-216ENST00000575599 SMCR5Q8TEV8 140 aa7.81□□□□□ -1.16
RPAIN-216ENST00000575599 Q9BRP9 147 aa7.8□□□□□ -1.16
RPAIN-216ENST00000575599 ZNF706Q9Y5V0 76 aaPredicted RBP7.8□□□□□ -1.16
RPAIN-216ENST00000575599 H3BMG7 143 aa7.79□□□□□ -1.16
RPAIN-216ENST00000575599 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.79□□□□□ -1.16
RPAIN-216ENST00000575599 SPRR4Q96PI1 79 aa7.79□□□□□ -1.16
RPAIN-216ENST00000575599 Q6ZQY7 126 aa7.78□□□□□ -1.16
RPAIN-216ENST00000575599 OCIAD2Q56VL3 154 aa7.77□□□□□ -1.17
RPAIN-216ENST00000575599 DEFB105AQ8NG35 78 aa7.77□□□□□ -1.17
RPAIN-216ENST00000575599 ORMDL1Q9P0S3 153 aa7.77□□□□□ -1.17
RPAIN-216ENST00000575599 C9JAW5 83 aa7.76□□□□□ -1.17
RPAIN-216ENST00000575599 H3BQ85 93 aa7.76□□□□□ -1.17
RPAIN-216ENST00000575599 C3orf22Q8N5N4 141 aa7.76□□□□□ -1.17
RPAIN-216ENST00000575599 LRP2P98164 4655 aa7.76□□□□□ -1.17
RPAIN-216ENST00000575599 UBR4Q5T4S7 5183 aa7.75□□□□□ -1.17
RPAIN-216ENST00000575599 ERC2-IT1O76042 136 aa7.75□□□□□ -1.17
RPAIN-216ENST00000575599 GAGE2AQ6NT46 116 aa7.74□□□□□ -1.17
RPAIN-216ENST00000575599 LINC00304Q8N9R0 145 aa7.74□□□□□ -1.17
RPAIN-216ENST00000575599 BAALC-AS2P0C853 105 aa7.73□□□□□ -1.17
RPAIN-216ENST00000575599 UBE2V1Q13404 147 aa7.73□□□□□ -1.17
RPAIN-216ENST00000575599 ST20-AS1Q8NBB2 130 aa7.73□□□□□ -1.17
RPAIN-216ENST00000575599 TEX49A0A1B0GTD5 131 aa7.72□□□□□ -1.17
RPAIN-216ENST00000575599 TMEM256-PLSCR3K7ERE1 68 aa7.72□□□□□ -1.17
RPAIN-216ENST00000575599 PRR4Q16378 134 aa7.72□□□□□ -1.17
RPAIN-216ENST00000575599 MTURNQ8N3F0 131 aa7.71□□□□□ -1.17
RPAIN-216ENST00000575599 PPDPFLQ8WWR9 84 aa7.71□□□□□ -1.17
RPAIN-216ENST00000575599 H3BT86 120 aa7.71□□□□□ -1.18
RPAIN-216ENST00000575599 LINC00483Q53H64 154 aa7.71□□□□□ -1.18
RPAIN-216ENST00000575599 F8W1H4 67 aa7.7□□□□□ -1.18
RPAIN-216ENST00000575599 LAMTOR3Q9UHA4 124 aa7.7□□□□□ -1.18
RPAIN-216ENST00000575599 LPAP08519 4548 aa7.69□□□□□ -1.18
RPAIN-216ENST00000575599 IGLV5-48A0A075B6I7 105 aa7.69□□□□□ -1.18
RPAIN-216ENST00000575599 ANKRD29Q8N6D5 301 aa7.69□□□□□ -1.18
RPAIN-216ENST00000575599 IGLV9-49A0A0B4J1Y8 123 aa7.68□□□□□ -1.18
RPAIN-216ENST00000575599 F8WEM9 126 aa7.68□□□□□ -1.18
RPAIN-216ENST00000575599 Q8N377 158 aa7.68□□□□□ -1.18
RPAIN-216ENST00000575599 Q8NBF4 154 aa7.68□□□□□ -1.18
RPAIN-216ENST00000575599 MOBPQ13875 183 aa7.67□□□□□ -1.18
RPAIN-216ENST00000575599 RETNLBQ9BQ08 111 aa7.67□□□□□ -1.18
RPAIN-216ENST00000575599 LINC01547P58512 204 aaPredicted RBP7.66□□□□□ -1.18
RPAIN-216ENST00000575599 SPRR1BP22528 89 aa7.65□□□□□ -1.18
RPAIN-216ENST00000575599 NDUFV3P56181 108 aaKnown RBP7.65□□□□□ -1.18
RPAIN-216ENST00000575599 SPAG11AQ6PDA7 123 aa7.64□□□□□ -1.19
RPAIN-216ENST00000575599 PRO0461Q9UI25 63 aa7.64□□□□□ -1.19
RPAIN-216ENST00000575599 C9orf153Q5TBE3 101 aa7.63□□□□□ -1.19
RPAIN-216ENST00000575599 A0A1B0GV72 72 aa7.62□□□□□ -1.19
RPAIN-216ENST00000575599 JMJD7-PLA2G4BH0Y9G9 81 aa7.62□□□□□ -1.19
RPAIN-216ENST00000575599 SVIPQ8NHG7 77 aa7.62□□□□□ -1.19
RPAIN-216ENST00000575599 RBM3P98179 157 aaKnown RBP7.6□□□□□ -1.19
RPAIN-216ENST00000575599 SMIM29Q86T20 159 aa7.6□□□□□ -1.19
RPAIN-216ENST00000575599 SSBP3-AS1Q7Z2R9 100 aa7.59□□□□□ -1.19
RPAIN-216ENST00000575599 DSCR8Q96T75 97 aa7.59□□□□□ -1.19
RPAIN-216ENST00000575599 ETDBQ3ZM63 59 aa7.59□□□□□ -1.2
RPAIN-216ENST00000575599 TEN1Q86WV5 123 aa7.59□□□□□ -1.2
RPAIN-216ENST00000575599 SPINK1P00995 79 aa7.58□□□□□ -1.2
RPAIN-216ENST00000575599 IGLV7-46A0A075B6I9 117 aa7.56□□□□□ -1.2
RPAIN-216ENST00000575599 Q6JHZ5 121 aa7.56□□□□□ -1.2
RPAIN-216ENST00000575599 C14orf132Q9NPU4 83 aa7.55□□□□□ -1.2
RPAIN-216ENST00000575599 PDE6GP18545 87 aa7.54□□□□□ -1.2
RPAIN-216ENST00000575599 IGLV8-61A0A075B6I0 122 aa7.53□□□□□ -1.2
RPAIN-216ENST00000575599 OBSCN-AS1Q96MR7 158 aa7.53□□□□□ -1.2
RPAIN-216ENST00000575599 RPS29P62273 56 aaKnown RBP7.52□□□□□ -1.21
RPAIN-216ENST00000575599 VPS25Q9BRG1 176 aa7.52□□□□□ -1.21
RPAIN-216ENST00000575599 RNF213Q63HN8 5207 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms