RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 FAT4Q6V0I7 4981 aa7.01□□□□□ -1.29
NPLOC4-213ENST00000573519 CD164Q04900 197 aa7.01□□□□□ -1.29
NPLOC4-213ENST00000573519 LCE2AQ5TA79 106 aaPredicted RBP7.01□□□□□ -1.29
NPLOC4-213ENST00000573519 Q6ZQY7 126 aa7.01□□□□□ -1.29
NPLOC4-213ENST00000573519 RAB37Q96AX2 223 aa7.01□□□□□ -1.29
NPLOC4-213ENST00000573519 C9orf92A6NGG3 77 aa7□□□□□ -1.29
NPLOC4-213ENST00000573519 F8WEM9 126 aa6.98□□□□□ -1.29
NPLOC4-213ENST00000573519 BVES-AS1Q5T3Y7 98 aa6.98□□□□□ -1.29
NPLOC4-213ENST00000573519 CEND1Q8N111 149 aa6.98□□□□□ -1.29
NPLOC4-213ENST00000573519 KRTAP4-1Q9BYQ7 146 aa6.98□□□□□ -1.29
NPLOC4-213ENST00000573519 A0A0B4J2C4 111 aa6.97□□□□□ -1.29
NPLOC4-213ENST00000573519 FXYD2P54710 66 aa6.97□□□□□ -1.29
NPLOC4-213ENST00000573519 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.95□□□□□ -1.3
NPLOC4-213ENST00000573519 TMEM238LA0A1B0GVL6 79 aa6.93□□□□□ -1.3
NPLOC4-213ENST00000573519 A6NJY4 79 aa6.93□□□□□ -1.3
NPLOC4-213ENST00000573519 C1orf195Q5TG92 126 aa6.93□□□□□ -1.3
NPLOC4-213ENST00000573519 Q5XG85 94 aa6.93□□□□□ -1.3
NPLOC4-213ENST00000573519 FAM218AQ96MZ4 157 aa6.93□□□□□ -1.3
NPLOC4-213ENST00000573519 PRO1854Q9UHT4 67 aa6.93□□□□□ -1.3
NPLOC4-213ENST00000573519 TCL1BO95988 128 aa6.92□□□□□ -1.3
NPLOC4-213ENST00000573519 OCIAD2Q56VL3 154 aa6.92□□□□□ -1.3
NPLOC4-213ENST00000573519 SNHG12Q9BXW3 62 aa6.92□□□□□ -1.3
NPLOC4-213ENST00000573519 H0YGX0 51 aa6.91□□□□□ -1.3
NPLOC4-213ENST00000573519 K7ERJ3 54 aa6.91□□□□□ -1.3
NPLOC4-213ENST00000573519 HSD52Q0P140 79 aa6.91□□□□□ -1.3
NPLOC4-213ENST00000573519 PCOTHQ58A44 107 aa6.91□□□□□ -1.3
NPLOC4-213ENST00000573519 IGLV8-61A0A075B6I0 122 aa6.9□□□□□ -1.3
NPLOC4-213ENST00000573519 H3BUT2 72 aa6.9□□□□□ -1.3
NPLOC4-213ENST00000573519 IGFL1Q6UW32 110 aa6.9□□□□□ -1.3
NPLOC4-213ENST00000573519 KRTAP9-2Q9BYQ4 174 aa6.9□□□□□ -1.3
NPLOC4-213ENST00000573519 TRIAP1O43715 76 aa6.89□□□□□ -1.31
NPLOC4-213ENST00000573519 Q6JHZ5 121 aa6.89□□□□□ -1.31
NPLOC4-213ENST00000573519 UQCR10Q9UDW1 63 aa6.89□□□□□ -1.31
NPLOC4-213ENST00000573519 SNCGO76070 127 aa6.88□□□□□ -1.31
NPLOC4-213ENST00000573519 PPDPFLQ8WWR9 84 aa6.88□□□□□ -1.31
NPLOC4-213ENST00000573519 CLEC2BQ92478 149 aa6.88□□□□□ -1.31
NPLOC4-213ENST00000573519 TRBV7-7A0A0K0K1E9 115 aa6.86□□□□□ -1.31
NPLOC4-213ENST00000573519 PSMB2P49721 201 aa6.85□□□□□ -1.31
NPLOC4-213ENST00000573519 FABP2P12104 132 aa6.84□□□□□ -1.31
NPLOC4-213ENST00000573519 NDUFV3P56181 108 aaKnown RBP6.84□□□□□ -1.31
NPLOC4-213ENST00000573519 A0A1B0GX51 115 aa6.83□□□□□ -1.32
NPLOC4-213ENST00000573519 RPL37P61927 97 aaKnown RBP6.82□□□□□ -1.32
NPLOC4-213ENST00000573519 H3BMG7 143 aa6.8□□□□□ -1.32
NPLOC4-213ENST00000573519 A0A1B0GV72 72 aa6.79□□□□□ -1.32
NPLOC4-213ENST00000573519 LST1O00453 97 aa6.78□□□□□ -1.32
NPLOC4-213ENST00000573519 DNAL4O96015 105 aa6.78□□□□□ -1.32
NPLOC4-213ENST00000573519 COX6CP09669 75 aa6.78□□□□□ -1.32
NPLOC4-213ENST00000573519 LCE2CQ5TA81 110 aa6.78□□□□□ -1.32
NPLOC4-213ENST00000573519 GHRHP01286 108 aa6.77□□□□□ -1.33
NPLOC4-213ENST00000573519 OBSCN-AS1Q96MR7 158 aa6.77□□□□□ -1.33
NPLOC4-213ENST00000573519 ORMDL1Q9P0S3 153 aa6.77□□□□□ -1.33
NPLOC4-213ENST00000573519 SCGB1C2P0DMR2 95 aa6.76□□□□□ -1.33
NPLOC4-213ENST00000573519 KRTAP19-2Q3LHN2 52 aa6.76□□□□□ -1.33
NPLOC4-213ENST00000573519 Q6Q795 121 aa6.76□□□□□ -1.33
NPLOC4-213ENST00000573519 TEN1Q86WV5 123 aa6.76□□□□□ -1.33
NPLOC4-213ENST00000573519 A0A087WSZ3 146 aa6.75□□□□□ -1.33
NPLOC4-213ENST00000573519 SS18L2Q9UHA2 77 aa6.75□□□□□ -1.33
NPLOC4-213ENST00000573519 A0A1W2PNM2 257 aa6.74□□□□□ -1.33
NPLOC4-213ENST00000573519 SMIM6P0DI80 62 aa6.73□□□□□ -1.33
NPLOC4-213ENST00000573519 MT1HP80294 61 aa6.73□□□□□ -1.33
NPLOC4-213ENST00000573519 TMEM256-PLSCR3K7ERE1 68 aa6.72□□□□□ -1.33
NPLOC4-213ENST00000573519 COX6B2Q6YFQ2 88 aa6.72□□□□□ -1.33
NPLOC4-213ENST00000573519 ATP11AUNQ6ZP68 121 aa6.72□□□□□ -1.33
NPLOC4-213ENST00000573519 ANKRD29Q8N6D5 301 aa6.72□□□□□ -1.33
NPLOC4-213ENST00000573519 NAA38Q9BRA0 125 aaKnown RBP6.72□□□□□ -1.33
NPLOC4-213ENST00000573519 H3BQ85 93 aa6.71□□□□□ -1.34
NPLOC4-213ENST00000573519 Q96NJ1 140 aa6.71□□□□□ -1.34
NPLOC4-213ENST00000573519 M0R143 59 aa6.7□□□□□ -1.34
NPLOC4-213ENST00000573519 TRACP01848 142 aa6.7□□□□□ -1.34
NPLOC4-213ENST00000573519 Q75L30 129 aa6.69□□□□□ -1.34
NPLOC4-213ENST00000573519 KRTAP9-6A0A140TA67 174 aa6.68□□□□□ -1.34
NPLOC4-213ENST00000573519 M0R2T5 61 aa6.68□□□□□ -1.34
NPLOC4-213ENST00000573519 UBE2V1Q13404 147 aa6.68□□□□□ -1.34
NPLOC4-213ENST00000573519 LOC105371267A0A1B0GV96 52 aa6.67□□□□□ -1.34
NPLOC4-213ENST00000573519 TRBV7-4A0A0J9YYF1 115 aa6.66□□□□□ -1.34
NPLOC4-213ENST00000573519 CCKP06307 115 aa6.66□□□□□ -1.34
NPLOC4-213ENST00000573519 BAALC-AS2P0C853 105 aa6.66□□□□□ -1.34
NPLOC4-213ENST00000573519 SIGMAR1Q99720 223 aa6.66□□□□□ -1.34
NPLOC4-213ENST00000573519 BATFQ16520 125 aa6.65□□□□□ -1.34
NPLOC4-213ENST00000573519 LCE2DQ5TA82 110 aaPredicted RBP6.65□□□□□ -1.34
NPLOC4-213ENST00000573519 TSTD3H0UI37 97 aa6.64□□□□□ -1.35
NPLOC4-213ENST00000573519 VPS25Q9BRG1 176 aa6.64□□□□□ -1.35
NPLOC4-213ENST00000573519 DSCR10P59022 87 aa6.63□□□□□ -1.35
NPLOC4-213ENST00000573519 RBM3P98179 157 aaKnown RBP6.63□□□□□ -1.35
NPLOC4-213ENST00000573519 ATXN8Q156A1 80 aa6.63□□□□□ -1.35
NPLOC4-213ENST00000573519 DEFB116Q30KQ4 102 aa6.63□□□□□ -1.35
NPLOC4-213ENST00000573519 IGKV4-1P06312 121 aa6.62□□□□□ -1.35
NPLOC4-213ENST00000573519 C20orf166-AS1Q96NR2 134 aa6.61□□□□□ -1.35
NPLOC4-213ENST00000573519 KRTAP10-6P60371 365 aaPredicted RBP6.6□□□□□ -1.35
NPLOC4-213ENST00000573519 DSCR8Q96T75 97 aa6.6□□□□□ -1.35
NPLOC4-213ENST00000573519 A8MUU9 505 aa6.59□□□□□ -1.35
NPLOC4-213ENST00000573519 LINC00472Q9H8W2 130 aa6.59□□□□□ -1.35
NPLOC4-213ENST00000573519 C9JAW5 83 aa6.58□□□□□ -1.36
NPLOC4-213ENST00000573519 LORP23490 312 aaPredicted RBP6.58□□□□□ -1.36
NPLOC4-213ENST00000573519 LINC00313P59037 77 aa6.57□□□□□ -1.36
NPLOC4-213ENST00000573519 NOTCH2NLQ7Z3S9 236 aa6.57□□□□□ -1.36
NPLOC4-213ENST00000573519 TRBV20-1A0A075B6N2 111 aa6.54□□□□□ -1.36
NPLOC4-213ENST00000573519 IGHV6-1A0A0B4J1U7 121 aa6.54□□□□□ -1.36
NPLOC4-213ENST00000573519 LYRM7Q5U5X0 104 aa6.54□□□□□ -1.36
NPLOC4-213ENST00000573519 FLGP20930 4061 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms