RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 IGLV7-46A0A075B6I9 117 aa4.84□□□□□ -1.63
SMG6-210ENST00000572205 C12orf57Q99622 126 aa4.84□□□□□ -1.63
SMG6-210ENST00000572205 CFC1BP0CG36 223 aa4.83□□□□□ -1.64
SMG6-210ENST00000572205 CFC1P0CG37 223 aa4.83□□□□□ -1.64
SMG6-210ENST00000572205 LINC00575Q6W349 94 aa4.83□□□□□ -1.64
SMG6-210ENST00000572205 A0A0G2JQZ4 141 aa4.82□□□□□ -1.64
SMG6-210ENST00000572205 TEX49A0A1B0GTD5 131 aa4.82□□□□□ -1.64
SMG6-210ENST00000572205 HINT1P49773 126 aaPredicted RBP4.82□□□□□ -1.64
SMG6-210ENST00000572205 Q1RN00 199 aa4.82□□□□□ -1.64
SMG6-210ENST00000572205 C9orf153Q5TBE3 101 aa4.82□□□□□ -1.64
SMG6-210ENST00000572205 KRTAP19-1Q8IUB9 90 aa4.82□□□□□ -1.64
SMG6-210ENST00000572205 VAMP8Q9BV40 100 aa4.82□□□□□ -1.64
SMG6-210ENST00000572205 A0A0B4J2C4 111 aa4.81□□□□□ -1.64
SMG6-210ENST00000572205 KRTAP9-6A0A140TA67 174 aa4.81□□□□□ -1.64
SMG6-210ENST00000572205 KRTAP9-7A8MTY7 169 aa4.81□□□□□ -1.64
SMG6-210ENST00000572205 FXYD2P54710 66 aa4.81□□□□□ -1.64
SMG6-210ENST00000572205 HIST1H4GQ99525 98 aa4.81□□□□□ -1.64
SMG6-210ENST00000572205 KRTAP4-1Q9BYQ7 146 aa4.81□□□□□ -1.64
SMG6-210ENST00000572205 SLC25A34Q6PIV7 304 aa4.8□□□□□ -1.64
SMG6-210ENST00000572205 FAM218AQ96MZ4 157 aa4.8□□□□□ -1.64
SMG6-210ENST00000572205 IGLV8-61A0A075B6I0 122 aa4.79□□□□□ -1.64
SMG6-210ENST00000572205 CD164Q04900 197 aa4.79□□□□□ -1.64
SMG6-210ENST00000572205 Q5XG85 94 aa4.79□□□□□ -1.64
SMG6-210ENST00000572205 Q6ZQY7 126 aa4.79□□□□□ -1.64
SMG6-210ENST00000572205 SLC25A20O43772 301 aa4.78□□□□□ -1.64
SMG6-210ENST00000572205 TAL2Q16559 108 aa4.78□□□□□ -1.64
SMG6-210ENST00000572205 LCE4AQ5TA78 99 aa4.78□□□□□ -1.64
SMG6-210ENST00000572205 CEND1Q8N111 149 aa4.78□□□□□ -1.64
SMG6-210ENST00000572205 DEFB105AQ8NG35 78 aa4.78□□□□□ -1.64
SMG6-210ENST00000572205 LAMTOR3Q9UHA4 124 aa4.78□□□□□ -1.64
SMG6-210ENST00000572205 Q6ZVQ6 151 aa4.77□□□□□ -1.65
SMG6-210ENST00000572205 hADV29S1A0JD25 119 aa4.76□□□□□ -1.65
SMG6-210ENST00000572205 ASB16-AS1Q495Z4 193 aa4.76□□□□□ -1.65
SMG6-210ENST00000572205 HRCT1Q6UXD1 115 aa4.76□□□□□ -1.65
SMG6-210ENST00000572205 NHP2Q9NX24 153 aaKnown RBP4.76□□□□□ -1.65
SMG6-210ENST00000572205 H7C2G1 150 aa4.75□□□□□ -1.65
SMG6-210ENST00000572205 C1orf195Q5TG92 126 aa4.75□□□□□ -1.65
SMG6-210ENST00000572205 IGFL1Q6UW32 110 aa4.75□□□□□ -1.65
SMG6-210ENST00000572205 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.75□□□□□ -1.65
SMG6-210ENST00000572205 PRO1933Q9H354 126 aa4.75□□□□□ -1.65
SMG6-210ENST00000572205 K7ERJ3 54 aa4.74□□□□□ -1.65
SMG6-210ENST00000572205 BVES-AS1Q5T3Y7 98 aa4.74□□□□□ -1.65
SMG6-210ENST00000572205 LIMD2Q9BT23 127 aa4.74□□□□□ -1.65
SMG6-210ENST00000572205 HSD52Q0P140 79 aa4.73□□□□□ -1.65
SMG6-210ENST00000572205 KRTAP19-2Q3LHN2 52 aa4.73□□□□□ -1.65
SMG6-210ENST00000572205 KRTAP9-4Q9BYQ2 154 aa4.73□□□□□ -1.65
SMG6-210ENST00000572205 VAMP3Q15836 100 aa4.72□□□□□ -1.65
SMG6-210ENST00000572205 PPDPFLQ8WWR9 84 aa4.72□□□□□ -1.65
SMG6-210ENST00000572205 CLEC2BQ92478 149 aa4.72□□□□□ -1.65
SMG6-210ENST00000572205 PRO1854Q9UHT4 67 aa4.72□□□□□ -1.65
SMG6-210ENST00000572205 LOC100996750A0A140TA64 210 aa4.71□□□□□ -1.66
SMG6-210ENST00000572205 RAB37Q96AX2 223 aa4.71□□□□□ -1.66
SMG6-210ENST00000572205 KRTAP4-6Q9BYQ5 205 aa4.71□□□□□ -1.66
SMG6-210ENST00000572205 TRBV7-7A0A0K0K1E9 115 aa4.7□□□□□ -1.66
SMG6-210ENST00000572205 H3BUT2 72 aa4.7□□□□□ -1.66
SMG6-210ENST00000572205 OCIAD2Q56VL3 154 aa4.7□□□□□ -1.66
SMG6-210ENST00000572205 UQCR10Q9UDW1 63 aa4.7□□□□□ -1.66
SMG6-210ENST00000572205 FLGP20930 4061 aaPredicted RBP4.7□□□□□ -1.66
SMG6-210ENST00000572205 H0YGX0 51 aa4.69□□□□□ -1.66
SMG6-210ENST00000572205 Q6JHZ5 121 aa4.69□□□□□ -1.66
SMG6-210ENST00000572205 KRTAP4-12Q9BQ66 201 aa4.69□□□□□ -1.66
SMG6-210ENST00000572205 A0A1B0GX51 115 aa4.68□□□□□ -1.66
SMG6-210ENST00000572205 Q6Q795 121 aa4.68□□□□□ -1.66
SMG6-210ENST00000572205 PRAC1Q96KF2 57 aa4.68□□□□□ -1.66
SMG6-210ENST00000572205 C9orf92A6NGG3 77 aa4.67□□□□□ -1.66
SMG6-210ENST00000572205 Q96NJ1 140 aa4.67□□□□□ -1.66
SMG6-210ENST00000572205 KRTAP9-9Q9BYP9 154 aa4.67□□□□□ -1.66
SMG6-210ENST00000572205 F8WEM9 126 aa4.66□□□□□ -1.66
SMG6-210ENST00000572205 SMIM6P0DI80 62 aa4.66□□□□□ -1.66
SMG6-210ENST00000572205 A0A1W2PNM2 257 aa4.65□□□□□ -1.67
SMG6-210ENST00000572205 NDUFV3P56181 108 aaKnown RBP4.65□□□□□ -1.67
SMG6-210ENST00000572205 SEC61GP60059 68 aa4.65□□□□□ -1.67
SMG6-210ENST00000572205 LOC105371267A0A1B0GV96 52 aa4.64□□□□□ -1.67
SMG6-210ENST00000572205 LST1O00453 97 aa4.63□□□□□ -1.67
SMG6-210ENST00000572205 RPL37P61927 97 aaKnown RBP4.63□□□□□ -1.67
SMG6-210ENST00000572205 TCL1BO95988 128 aa4.62□□□□□ -1.67
SMG6-210ENST00000572205 PCOTHQ58A44 107 aa4.62□□□□□ -1.67
SMG6-210ENST00000572205 TEN1Q86WV5 123 aa4.61□□□□□ -1.67
SMG6-210ENST00000572205 SNHG12Q9BXW3 62 aa4.61□□□□□ -1.67
SMG6-210ENST00000572205 A0A0U1RQV1 116 aa4.6□□□□□ -1.67
SMG6-210ENST00000572205 H3BMG7 143 aa4.6□□□□□ -1.67
SMG6-210ENST00000572205 TRACP01848 142 aa4.6□□□□□ -1.67
SMG6-210ENST00000572205 KRTAP4-8Q9BYQ9 185 aa4.6□□□□□ -1.67
SMG6-210ENST00000572205 A0A087WSZ3 146 aa4.59□□□□□ -1.67
SMG6-210ENST00000572205 TRBV7-4A0A0J9YYF1 115 aa4.59□□□□□ -1.67
SMG6-210ENST00000572205 ORMDL1Q9P0S3 153 aa4.59□□□□□ -1.67
SMG6-210ENST00000572205 FABP2P12104 132 aa4.58□□□□□ -1.68
SMG6-210ENST00000572205 NAA38Q9BRA0 125 aaKnown RBP4.58□□□□□ -1.68
SMG6-210ENST00000572205 A0A1B0GV72 72 aa4.57□□□□□ -1.68
SMG6-210ENST00000572205 KRTAP16-1A8MUX0 517 aa4.57□□□□□ -1.68
SMG6-210ENST00000572205 PSMB2P49721 201 aa4.57□□□□□ -1.68
SMG6-210ENST00000572205 MT1HP80294 61 aa4.57□□□□□ -1.68
SMG6-210ENST00000572205 PCP4L1A6NKN8 68 aa4.56□□□□□ -1.68
SMG6-210ENST00000572205 OBSCN-AS1Q96MR7 158 aa4.56□□□□□ -1.68
SMG6-210ENST00000572205 KRTAP9-3Q9BYQ3 159 aa4.56□□□□□ -1.68
SMG6-210ENST00000572205 SS18L2Q9UHA2 77 aa4.56□□□□□ -1.68
SMG6-210ENST00000572205 TMEM256-PLSCR3K7ERE1 68 aa4.55□□□□□ -1.68
SMG6-210ENST00000572205 DNAL4O96015 105 aa4.55□□□□□ -1.68
SMG6-210ENST00000572205 IGKV2-30P06310 120 aa4.55□□□□□ -1.68
SMG6-210ENST00000572205 C20orf166-AS1Q96NR2 134 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms