RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 NAT8BQ9UHF3 227 aa1.7□□□□□ -2.14
CNOT1-221ENST00000569924 HSPB8Q9UJY1 196 aa1.7□□□□□ -2.14
CNOT1-221ENST00000569924 UBE2D4Q9Y2X8 147 aa1.7□□□□□ -2.14
CNOT1-221ENST00000569924 AHNAKQ09666 5890 aaKnown RBP1.69□□□□□ -2.14
CNOT1-221ENST00000569924 TRAV13-1A0A0B4J241 112 aa1.69□□□□□ -2.14
CNOT1-221ENST00000569924 TRBV7-6A0A0J9YX20 115 aa1.69□□□□□ -2.14
CNOT1-221ENST00000569924 A0A1B0GUT8 65 aa1.69□□□□□ -2.14
CNOT1-221ENST00000569924 A0A1B0GVG6 124 aa1.69□□□□□ -2.14
CNOT1-221ENST00000569924 J3QQQ9 107 aa1.69□□□□□ -2.14
CNOT1-221ENST00000569924 NDUFA1O15239 70 aa1.69□□□□□ -2.14
CNOT1-221ENST00000569924 HIST1H2BKO60814 126 aa1.69□□□□□ -2.14
CNOT1-221ENST00000569924 IGLV6-57P01721 117 aa1.69□□□□□ -2.14
CNOT1-221ENST00000569924 HIST1H2BJP06899 126 aa1.69□□□□□ -2.14
CNOT1-221ENST00000569924 FCER1GP30273 86 aa1.69□□□□□ -2.14
CNOT1-221ENST00000569924 HBBP68871 147 aa1.69□□□□□ -2.14
CNOT1-221ENST00000569924 SOSTDC1Q6X4U4 206 aa1.69□□□□□ -2.14
CNOT1-221ENST00000569924 C5orf38Q86SI9 138 aa1.69□□□□□ -2.14
CNOT1-221ENST00000569924 NHP2Q9NX24 153 aaKnown RBP1.69□□□□□ -2.14
CNOT1-221ENST00000569924 TRBV30A0A0K0K1B3 111 aa1.68□□□□□ -2.14
CNOT1-221ENST00000569924 HIGD1CA8MV81 97 aa1.68□□□□□ -2.14
CNOT1-221ENST00000569924 C9JAW5 83 aa1.68□□□□□ -2.14
CNOT1-221ENST00000569924 NUPR1O60356 82 aa1.68□□□□□ -2.14
CNOT1-221ENST00000569924 DPM2O94777 84 aa1.68□□□□□ -2.14
CNOT1-221ENST00000569924 CRYGAP11844 174 aa1.68□□□□□ -2.14
CNOT1-221ENST00000569924 HINT1P49773 126 aaPredicted RBP1.68□□□□□ -2.14
CNOT1-221ENST00000569924 NDUFA6P56556 154 aa1.68□□□□□ -2.14
CNOT1-221ENST00000569924 MRPS36P82909 103 aaKnown RBP1.68□□□□□ -2.14
CNOT1-221ENST00000569924 UNQ6190/PRO20217Q6UXQ8 127 aa1.68□□□□□ -2.14
CNOT1-221ENST00000569924 Q6ZUT4 128 aa1.68□□□□□ -2.14
CNOT1-221ENST00000569924 C20orf78Q9BR46 151 aa1.68□□□□□ -2.14
CNOT1-221ENST00000569924 C6orf48Q9UBA6 75 aa1.68□□□□□ -2.14
CNOT1-221ENST00000569924 K7ERJ3 54 aa1.67□□□□□ -2.14
CNOT1-221ENST00000569924 TIMM17BO60830 172 aa1.67□□□□□ -2.14
CNOT1-221ENST00000569924 FABP2P12104 132 aa1.67□□□□□ -2.14
CNOT1-221ENST00000569924 TMEM258P61165 79 aa1.67□□□□□ -2.14
CNOT1-221ENST00000569924 Q5XG85 94 aa1.67□□□□□ -2.14
CNOT1-221ENST00000569924 KRTAP5-1Q6L8H4 278 aa1.67□□□□□ -2.14
CNOT1-221ENST00000569924 TCTE3Q8IZS6 198 aa1.67□□□□□ -2.14
CNOT1-221ENST00000569924 PRO2289Q9P1D8 64 aa1.67□□□□□ -2.14
CNOT1-221ENST00000569924 ZNF727A8MUV8 499 aa1.66□□□□□ -2.14
CNOT1-221ENST00000569924 BCE1O60756 84 aa1.66□□□□□ -2.14
CNOT1-221ENST00000569924 CKS2P33552 79 aa1.66□□□□□ -2.14
CNOT1-221ENST00000569924 RPL39P62891 51 aaKnown RBP1.66□□□□□ -2.14
CNOT1-221ENST00000569924 TPRXLQ17RH7 258 aa1.66□□□□□ -2.14
CNOT1-221ENST00000569924 KRTAP5-4Q6L8H1 288 aa1.66□□□□□ -2.14
CNOT1-221ENST00000569924 C2orf82Q6UX34 121 aa1.66□□□□□ -2.14
CNOT1-221ENST00000569924 Q6ZQT0 140 aa1.66□□□□□ -2.14
CNOT1-221ENST00000569924 C20orf166-AS1Q96NR2 134 aa1.66□□□□□ -2.14
CNOT1-221ENST00000569924 SMIM7Q9BQ49 75 aa1.66□□□□□ -2.14
CNOT1-221ENST00000569924 SMIM2Q9BVW6 85 aa1.66□□□□□ -2.14
CNOT1-221ENST00000569924 C22orf24Q9Y442 160 aa1.66□□□□□ -2.14
CNOT1-221ENST00000569924 V9GYV3 84 aa1.66□□□□□ -2.14
CNOT1-221ENST00000569924 SMIM27A0A1W2PRY6 76 aa1.65□□□□□ -2.15
CNOT1-221ENST00000569924 D6R8Y8 96 aa1.65□□□□□ -2.15
CNOT1-221ENST00000569924 F8W036 122 aa1.65□□□□□ -2.15
CNOT1-221ENST00000569924 S100A8P05109 93 aa1.65□□□□□ -2.15
CNOT1-221ENST00000569924 IFI27P40305 119 aaPredicted RBP1.65□□□□□ -2.15
CNOT1-221ENST00000569924 C7orf65Q6ZTY9 151 aa1.65□□□□□ -2.15
CNOT1-221ENST00000569924 KRTAP13-1Q8IUC0 172 aa1.65□□□□□ -2.15
CNOT1-221ENST00000569924 Q8IZM0 81 aa1.65□□□□□ -2.15
CNOT1-221ENST00000569924 LINC00304Q8N9R0 145 aa1.65□□□□□ -2.15
CNOT1-221ENST00000569924 TMEM141Q96I45 108 aa1.65□□□□□ -2.15
CNOT1-221ENST00000569924 VPS25Q9BRG1 176 aa1.65□□□□□ -2.15
CNOT1-221ENST00000569924 USH2AO75445 5202 aa1.64□□□□□ -2.15
CNOT1-221ENST00000569924 F8VRH5 84 aa1.64□□□□□ -2.15
CNOT1-221ENST00000569924 SEC11AP67812 179 aa1.64□□□□□ -2.15
CNOT1-221ENST00000569924 FP248Q71RG6 208 aaPredicted RBP1.64□□□□□ -2.15
CNOT1-221ENST00000569924 BRK1Q8WUW1 75 aa1.64□□□□□ -2.15
CNOT1-221ENST00000569924 AMELXQ99217 191 aa1.64□□□□□ -2.15
CNOT1-221ENST00000569924 RETNLBQ9BQ08 111 aa1.64□□□□□ -2.15
CNOT1-221ENST00000569924 C2orf88Q9BSF0 95 aa1.64□□□□□ -2.15
CNOT1-221ENST00000569924 KRTAP4-4Q9BYR3 166 aa1.64□□□□□ -2.15
CNOT1-221ENST00000569924 FCGBPQ9Y6R7 5405 aaPredicted RBP1.64□□□□□ -2.15
CNOT1-221ENST00000569924 IGKV2D-26A0A0A0MRZ7 120 aa1.63□□□□□ -2.15
CNOT1-221ENST00000569924 IGIPA6NJ69 53 aa1.63□□□□□ -2.15
CNOT1-221ENST00000569924 H3BMG7 143 aa1.63□□□□□ -2.15
CNOT1-221ENST00000569924 K7EMI3 77 aa1.63□□□□□ -2.15
CNOT1-221ENST00000569924 ASB16-AS1Q495Z4 193 aa1.63□□□□□ -2.15
CNOT1-221ENST00000569924 SPAG11AQ6PDA7 123 aa1.63□□□□□ -2.15
CNOT1-221ENST00000569924 ALKAL2Q6UX46 152 aa1.63□□□□□ -2.15
CNOT1-221ENST00000569924 PRELID3AQ96N28 172 aa1.63□□□□□ -2.15
CNOT1-221ENST00000569924 TOMM7Q9P0U1 55 aa1.63□□□□□ -2.15
CNOT1-221ENST00000569924 MT-ND4LP03901 98 aa1.62□□□□□ -2.15
CNOT1-221ENST00000569924 BAALC-AS2P0C853 105 aa1.62□□□□□ -2.15
CNOT1-221ENST00000569924 P0C880 135 aa1.62□□□□□ -2.15
CNOT1-221ENST00000569924 ADIRFQ15847 76 aa1.62□□□□□ -2.15
CNOT1-221ENST00000569924 KRTAP13-3Q3SY46 172 aa1.62□□□□□ -2.15
CNOT1-221ENST00000569924 MRPL54Q6P161 138 aaKnown RBP1.62□□□□□ -2.15
CNOT1-221ENST00000569924 Q8N8P6 123 aa1.62□□□□□ -2.15
CNOT1-221ENST00000569924 COX7B2Q8TF08 81 aa1.62□□□□□ -2.15
CNOT1-221ENST00000569924 C14orf132Q9NPU4 83 aa1.62□□□□□ -2.15
CNOT1-221ENST00000569924 CDKN2A-AS1Q9UH64 79 aa1.62□□□□□ -2.15
CNOT1-221ENST00000569924 A0A0G2JQZ4 141 aa1.61□□□□□ -2.15
CNOT1-221ENST00000569924 LINC01549A6NIU2 74 aa1.61□□□□□ -2.15
CNOT1-221ENST00000569924 KRTAP10-5P60370 271 aa1.61□□□□□ -2.15
CNOT1-221ENST00000569924 KRTAP10-6P60371 365 aaPredicted RBP1.61□□□□□ -2.15
CNOT1-221ENST00000569924 ROMO1P60602 79 aa1.61□□□□□ -2.15
CNOT1-221ENST00000569924 PRLHP81277 87 aa1.61□□□□□ -2.15
CNOT1-221ENST00000569924 PEA15Q15121 130 aa1.61□□□□□ -2.15
CNOT1-221ENST00000569924 LCE3EQ5T5B0 92 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms