RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 SEC61BP60468 96 aaKnown RBP10.58□□□□□ -0.72
GTF3C1-207ENST00000567806 MOBPQ13875 183 aa10.58□□□□□ -0.72
GTF3C1-207ENST00000567806 GHRHP01286 108 aa10.57□□□□□ -0.72
GTF3C1-207ENST00000567806 ERC2-IT1O76042 136 aa10.56□□□□□ -0.72
GTF3C1-207ENST00000567806 LINC01547P58512 204 aaPredicted RBP10.56□□□□□ -0.72
GTF3C1-207ENST00000567806 A0A1B0GX51 115 aa10.55□□□□□ -0.72
GTF3C1-207ENST00000567806 PSMB2P49721 201 aa10.55□□□□□ -0.72
GTF3C1-207ENST00000567806 RPS29P62273 56 aaKnown RBP10.54□□□□□ -0.72
GTF3C1-207ENST00000567806 Q8N377 158 aa10.53□□□□□ -0.72
GTF3C1-207ENST00000567806 Q9BRP9 147 aa10.53□□□□□ -0.72
GTF3C1-207ENST00000567806 LYRM7Q5U5X0 104 aa10.52□□□□□ -0.73
GTF3C1-207ENST00000567806 hADV29S1A0JD25 119 aa10.51□□□□□ -0.73
GTF3C1-207ENST00000567806 K7ERJ3 54 aa10.51□□□□□ -0.73
GTF3C1-207ENST00000567806 LINC00575Q6W349 94 aa10.51□□□□□ -0.73
GTF3C1-207ENST00000567806 BATFQ16520 125 aa10.5□□□□□ -0.73
GTF3C1-207ENST00000567806 OCIAD2Q56VL3 154 aa10.5□□□□□ -0.73
GTF3C1-207ENST00000567806 SCGB1C2P0DMR2 95 aa10.49□□□□□ -0.73
GTF3C1-207ENST00000567806 KRTAP4-1Q9BYQ7 146 aa10.49□□□□□ -0.73
GTF3C1-207ENST00000567806 H3BQ85 93 aa10.48□□□□□ -0.73
GTF3C1-207ENST00000567806 C9orf153Q5TBE3 101 aa10.48□□□□□ -0.73
GTF3C1-207ENST00000567806 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.48□□□□□ -0.73
GTF3C1-207ENST00000567806 TRIAP1O43715 76 aa10.47□□□□□ -0.73
GTF3C1-207ENST00000567806 PPDPFLQ8WWR9 84 aa10.47□□□□□ -0.73
GTF3C1-207ENST00000567806 TEX49A0A1B0GTD5 131 aa10.45□□□□□ -0.74
GTF3C1-207ENST00000567806 DNAL4O96015 105 aa10.45□□□□□ -0.74
GTF3C1-207ENST00000567806 SPRR1BP22528 89 aa10.44□□□□□ -0.74
GTF3C1-207ENST00000567806 PCP4L1A6NKN8 68 aa10.43□□□□□ -0.74
GTF3C1-207ENST00000567806 COL5A1-AS1Q5SY13 56 aa10.43□□□□□ -0.74
GTF3C1-207ENST00000567806 XP32Q5T750 250 aa10.43□□□□□ -0.74
GTF3C1-207ENST00000567806 LAMTOR3Q9UHA4 124 aa10.43□□□□□ -0.74
GTF3C1-207ENST00000567806 IGLV5-48A0A075B6I7 105 aa10.42□□□□□ -0.74
GTF3C1-207ENST00000567806 ST20-AS1Q8NBB2 130 aa10.41□□□□□ -0.74
GTF3C1-207ENST00000567806 TRBV20-1A0A075B6N2 111 aa10.4□□□□□ -0.74
GTF3C1-207ENST00000567806 Q6ZQY7 126 aa10.4□□□□□ -0.74
GTF3C1-207ENST00000567806 TRACP01848 142 aa10.39□□□□□ -0.75
GTF3C1-207ENST00000567806 SNHG12Q9BXW3 62 aa10.39□□□□□ -0.75
GTF3C1-207ENST00000567806 C9orf118A6NHY6 69 aa10.38□□□□□ -0.75
GTF3C1-207ENST00000567806 ATXN8Q156A1 80 aa10.37□□□□□ -0.75
GTF3C1-207ENST00000567806 DEFB105AQ8NG35 78 aa10.37□□□□□ -0.75
GTF3C1-207ENST00000567806 F8WEM9 126 aa10.36□□□□□ -0.75
GTF3C1-207ENST00000567806 LCE2DQ5TA82 110 aaPredicted RBP10.36□□□□□ -0.75
GTF3C1-207ENST00000567806 H3BUT2 72 aa10.35□□□□□ -0.75
GTF3C1-207ENST00000567806 LST1O00453 97 aa10.35□□□□□ -0.75
GTF3C1-207ENST00000567806 ORMDL1Q9P0S3 153 aa10.35□□□□□ -0.75
GTF3C1-207ENST00000567806 FABP2P12104 132 aa10.34□□□□□ -0.75
GTF3C1-207ENST00000567806 HRCT1Q6UXD1 115 aa10.34□□□□□ -0.75
GTF3C1-207ENST00000567806 CLEC2BQ92478 149 aa10.34□□□□□ -0.75
GTF3C1-207ENST00000567806 FAM218AQ96MZ4 157 aa10.34□□□□□ -0.75
GTF3C1-207ENST00000567806 LIMD2Q9BT23 127 aa10.34□□□□□ -0.75
GTF3C1-207ENST00000567806 TMEM256-PLSCR3K7ERE1 68 aa10.33□□□□□ -0.76
GTF3C1-207ENST00000567806 TAX1BP3O14907 124 aa10.33□□□□□ -0.76
GTF3C1-207ENST00000567806 A0A1W2PPM0 123 aa10.31□□□□□ -0.76
GTF3C1-207ENST00000567806 PCOTHQ58A44 107 aa10.28□□□□□ -0.76
GTF3C1-207ENST00000567806 C9orf92A6NGG3 77 aa10.27□□□□□ -0.77
GTF3C1-207ENST00000567806 TCL1BO95988 128 aa10.27□□□□□ -0.77
GTF3C1-207ENST00000567806 LCE2CQ5TA81 110 aa10.27□□□□□ -0.77
GTF3C1-207ENST00000567806 Q6JHZ5 121 aa10.27□□□□□ -0.77
GTF3C1-207ENST00000567806 NAA38Q9BRA0 125 aaKnown RBP10.27□□□□□ -0.77
GTF3C1-207ENST00000567806 IGLV8-61A0A075B6I0 122 aa10.26□□□□□ -0.77
GTF3C1-207ENST00000567806 UBE2V1Q13404 147 aa10.25□□□□□ -0.77
GTF3C1-207ENST00000567806 SMIM29Q86T20 159 aa10.25□□□□□ -0.77
GTF3C1-207ENST00000567806 NDUFV3P56181 108 aaKnown RBP10.24□□□□□ -0.77
GTF3C1-207ENST00000567806 CD164Q04900 197 aa10.22□□□□□ -0.77
GTF3C1-207ENST00000567806 CRCT1Q9UGL9 99 aa10.22□□□□□ -0.77
GTF3C1-207ENST00000567806 SPCS1Q9Y6A9 102 aa10.22□□□□□ -0.77
GTF3C1-207ENST00000567806 BAALC-AS2P0C853 105 aa10.21□□□□□ -0.77
GTF3C1-207ENST00000567806 GTF2H5Q6ZYL4 71 aa10.21□□□□□ -0.77
GTF3C1-207ENST00000567806 FSIP2Q5CZC0 6907 aa10.21□□□□□ -0.78
GTF3C1-207ENST00000567806 KRTAP19-2Q3LHN2 52 aa10.19□□□□□ -0.78
GTF3C1-207ENST00000567806 H3BMG7 143 aa10.18□□□□□ -0.78
GTF3C1-207ENST00000567806 MT1HP80294 61 aa10.18□□□□□ -0.78
GTF3C1-207ENST00000567806 C21orf62-AS1Q17RA5 79 aa10.18□□□□□ -0.78
GTF3C1-207ENST00000567806 C9JAW5 83 aa10.17□□□□□ -0.78
GTF3C1-207ENST00000567806 JMJD7-PLA2G4BH0Y9G9 81 aa10.17□□□□□ -0.78
GTF3C1-207ENST00000567806 H3BT86 120 aa10.17□□□□□ -0.78
GTF3C1-207ENST00000567806 ANKRD29Q8N6D5 301 aa10.17□□□□□ -0.78
GTF3C1-207ENST00000567806 K7EP34 96 aa10.14□□□□□ -0.79
GTF3C1-207ENST00000567806 Q5XG85 94 aa10.14□□□□□ -0.79
GTF3C1-207ENST00000567806 RBM3P98179 157 aaKnown RBP10.13□□□□□ -0.79
GTF3C1-207ENST00000567806 PDE6GP18545 87 aa10.12□□□□□ -0.79
GTF3C1-207ENST00000567806 C1orf195Q5TG92 126 aa10.12□□□□□ -0.79
GTF3C1-207ENST00000567806 DSCR8Q96T75 97 aa10.12□□□□□ -0.79
GTF3C1-207ENST00000567806 Q6Q795 121 aa10.09□□□□□ -0.79
GTF3C1-207ENST00000567806 IGFL1Q6UW32 110 aa10.09□□□□□ -0.79
GTF3C1-207ENST00000567806 TEN1Q86WV5 123 aa10.09□□□□□ -0.79
GTF3C1-207ENST00000567806 A0A0G2JQZ4 141 aa10.08□□□□□ -0.8
GTF3C1-207ENST00000567806 M0R2T5 61 aa10.06□□□□□ -0.8
GTF3C1-207ENST00000567806 RPL37P61927 97 aaKnown RBP10.06□□□□□ -0.8
GTF3C1-207ENST00000567806 SS18L2Q9UHA2 77 aa10.06□□□□□ -0.8
GTF3C1-207ENST00000567806 A0A1B0GW54 56 aa10.05□□□□□ -0.8
GTF3C1-207ENST00000567806 F8W1H4 67 aa10.05□□□□□ -0.8
GTF3C1-207ENST00000567806 COX6B2Q6YFQ2 88 aa10.04□□□□□ -0.8
GTF3C1-207ENST00000567806 TRBV7-4A0A0J9YYF1 115 aa10.03□□□□□ -0.8
GTF3C1-207ENST00000567806 TRBV7-7A0A0K0K1E9 115 aa10.03□□□□□ -0.8
GTF3C1-207ENST00000567806 LORP23490 312 aaPredicted RBP10.03□□□□□ -0.8
GTF3C1-207ENST00000567806 KRTAP10-6P60371 365 aaPredicted RBP10.03□□□□□ -0.8
GTF3C1-207ENST00000567806 LOC110117498A0A087WWA1 95 aa10□□□□□ -0.81
GTF3C1-207ENST00000567806 CCKP06307 115 aa10□□□□□ -0.81
GTF3C1-207ENST00000567806 OBSCN-AS1Q96MR7 158 aa10□□□□□ -0.81
GTF3C1-207ENST00000567806 A0A1B0GV72 72 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms