RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 CASC10Q5T4H9 136 aa9.93□□□□□ -0.82
COMMD4-215ENST00000566843 PRB2P02812 416 aaPredicted RBP9.9□□□□□ -0.82
COMMD4-215ENST00000566843 MP68P56378 58 aa9.9□□□□□ -0.82
COMMD4-215ENST00000566843 KRTAP29-1A8MX34 341 aaPredicted RBP9.9□□□□□ -0.83
COMMD4-215ENST00000566843 A0A0G2JQZ4 141 aa9.89□□□□□ -0.83
COMMD4-215ENST00000566843 A0A1W2PNN7 141 aa9.89□□□□□ -0.83
COMMD4-215ENST00000566843 PRR4Q16378 134 aa9.89□□□□□ -0.83
COMMD4-215ENST00000566843 NOTCH1P46531 2555 aa9.89□□□□□ -0.83
COMMD4-215ENST00000566843 C11orf45Q8TAV5 145 aa9.89□□□□□ -0.83
COMMD4-215ENST00000566843 PSPHP1O15172 72 aa9.88□□□□□ -0.83
COMMD4-215ENST00000566843 WFDC13Q8IUB5 93 aa9.88□□□□□ -0.83
COMMD4-215ENST00000566843 SPANXA2-OT1Q8N9U9 137 aa9.87□□□□□ -0.83
COMMD4-215ENST00000566843 MGAM2Q2M2H8 2515 aa9.87□□□□□ -0.83
COMMD4-215ENST00000566843 H3BPC8 53 aa9.86□□□□□ -0.83
COMMD4-215ENST00000566843 DEFB116Q30KQ4 102 aa9.86□□□□□ -0.83
COMMD4-215ENST00000566843 B9D2Q9BPU9 175 aa9.86□□□□□ -0.83
COMMD4-215ENST00000566843 A0A087WSZ3 146 aa9.86□□□□□ -0.83
COMMD4-215ENST00000566843 LINC00588Q9Y4M8 146 aa9.85□□□□□ -0.83
COMMD4-215ENST00000566843 LINC00208Q96KT6 92 aa9.85□□□□□ -0.83
COMMD4-215ENST00000566843 DNAH3Q8TD57 4116 aa9.84□□□□□ -0.83
COMMD4-215ENST00000566843 DNAH1Q9P2D7 4330 aa9.83□□□□□ -0.84
COMMD4-215ENST00000566843 NBEAL1Q6ZS30 2694 aa9.83□□□□□ -0.84
COMMD4-215ENST00000566843 A8MUN3 132 aa9.82□□□□□ -0.84
COMMD4-215ENST00000566843 RPL37AP61513 92 aaKnown RBP9.82□□□□□ -0.84
COMMD4-215ENST00000566843 H0Y9P7 68 aa9.81□□□□□ -0.84
COMMD4-215ENST00000566843 CNBPP62633 177 aaKnown RBP9.8□□□□□ -0.84
COMMD4-215ENST00000566843 PRLHP81277 87 aa9.8□□□□□ -0.84
COMMD4-215ENST00000566843 Q5VV11 94 aa9.8□□□□□ -0.84
COMMD4-215ENST00000566843 CASC2Q6XLA1 102 aa9.8□□□□□ -0.84
COMMD4-215ENST00000566843 K7EIL1 84 aa9.78□□□□□ -0.84
COMMD4-215ENST00000566843 DNHD1Q96M86 4753 aa9.77□□□□□ -0.84
COMMD4-215ENST00000566843 SPRR1BP22528 89 aa9.77□□□□□ -0.85
COMMD4-215ENST00000566843 UBE2AP49459 152 aa9.77□□□□□ -0.85
COMMD4-215ENST00000566843 Q8N9P0 234 aaPredicted RBP9.77□□□□□ -0.85
COMMD4-215ENST00000566843 C9orf163Q8N9P6 203 aa9.77□□□□□ -0.85
COMMD4-215ENST00000566843 A8MWP4 228 aa9.76□□□□□ -0.85
COMMD4-215ENST00000566843 LINC00472Q9H8W2 130 aa9.76□□□□□ -0.85
COMMD4-215ENST00000566843 C16orf90A8MZG2 172 aa9.76□□□□□ -0.85
COMMD4-215ENST00000566843 A0A096LNI7 61 aa9.75□□□□□ -0.85
COMMD4-215ENST00000566843 LIMD2Q9BT23 127 aa9.75□□□□□ -0.85
COMMD4-215ENST00000566843 TENM3Q9P273 2699 aa9.74□□□□□ -0.85
COMMD4-215ENST00000566843 KTN1-AS1Q86SY8 53 aa9.73□□□□□ -0.85
COMMD4-215ENST00000566843 H0Y9J4 135 aa9.71□□□□□ -0.85
COMMD4-215ENST00000566843 RBM12B-AS1Q9P1G2 102 aa9.71□□□□□ -0.86
COMMD4-215ENST00000566843 IGKV2-24A0A0C4DH68 120 aa9.69□□□□□ -0.86
COMMD4-215ENST00000566843 A8MU10 97 aa9.68□□□□□ -0.86
COMMD4-215ENST00000566843 MMP24-AS1A0A0U1RRL7 71 aa9.68□□□□□ -0.86
COMMD4-215ENST00000566843 IGLV7-46A0A075B6I9 117 aa9.67□□□□□ -0.86
COMMD4-215ENST00000566843 CHKB-CPT1BH3BT56 60 aa9.67□□□□□ -0.86
COMMD4-215ENST00000566843 KRTAP11-1Q8IUC1 163 aa9.67□□□□□ -0.86
COMMD4-215ENST00000566843 PRR15LQ9BU68 103 aa9.66□□□□□ -0.86
COMMD4-215ENST00000566843 LOC101927531A0A1B0GV80 90 aa9.65□□□□□ -0.86
COMMD4-215ENST00000566843 C4orf48Q5BLP8 95 aa9.65□□□□□ -0.86
COMMD4-215ENST00000566843 Q75L30 129 aa9.65□□□□□ -0.87
COMMD4-215ENST00000566843 COA5Q86WW8 74 aa9.65□□□□□ -0.87
COMMD4-215ENST00000566843 KRTAP21-3Q3LHN1 58 aa9.64□□□□□ -0.87
COMMD4-215ENST00000566843 NDUFS5O43920 106 aa9.63□□□□□ -0.87
COMMD4-215ENST00000566843 PHF5AQ7RTV0 110 aaKnown RBP9.63□□□□□ -0.87
COMMD4-215ENST00000566843 ASB16-AS1Q495Z4 193 aa9.63□□□□□ -0.87
COMMD4-215ENST00000566843 HUWE1Q7Z6Z7 4374 aaKnown RBP9.61□□□□□ -0.87
COMMD4-215ENST00000566843 KRTAP1-5Q9BYS1 174 aa9.6□□□□□ -0.87
COMMD4-215ENST00000566843 LCA10Q71F78 164 aa9.58□□□□□ -0.88
COMMD4-215ENST00000566843 TP53AIP1Q9HCN2 124 aa9.58□□□□□ -0.88
COMMD4-215ENST00000566843 Q96NJ1 140 aa9.57□□□□□ -0.88
COMMD4-215ENST00000566843 CHTF8P0CG12 524 aa9.57□□□□□ -0.88
COMMD4-215ENST00000566843 ATP11AUNQ6ZP68 121 aa9.57□□□□□ -0.88
COMMD4-215ENST00000566843 MOBPQ13875 183 aa9.56□□□□□ -0.88
COMMD4-215ENST00000566843 Q6ZR54 194 aa9.56□□□□□ -0.88
COMMD4-215ENST00000566843 PLAC8Q9NZF1 115 aa9.56□□□□□ -0.88
COMMD4-215ENST00000566843 C14orf177Q52M58 125 aa9.55□□□□□ -0.88
COMMD4-215ENST00000566843 KRTAP13-1Q8IUC0 172 aa9.55□□□□□ -0.88
COMMD4-215ENST00000566843 COL7A1Q02388 2944 aa9.54□□□□□ -0.88
COMMD4-215ENST00000566843 DNAH9Q9NYC9 4486 aa9.54□□□□□ -0.88
COMMD4-215ENST00000566843 LINC01558Q9Y6Z2 57 aa9.54□□□□□ -0.88
COMMD4-215ENST00000566843 MEGF8Q7Z7M0 2845 aa9.53□□□□□ -0.88
COMMD4-215ENST00000566843 PRKDCP78527 4128 aaKnown RBP9.52□□□□□ -0.89
COMMD4-215ENST00000566843 A6NED7 52 aa9.52□□□□□ -0.89
COMMD4-215ENST00000566843 PCOTHQ58A44 107 aa9.52□□□□□ -0.89
COMMD4-215ENST00000566843 C8orf17Q9NRJ1 99 aa9.52□□□□□ -0.89
COMMD4-215ENST00000566843 CDC42SE1Q9NRR8 79 aa9.51□□□□□ -0.89
COMMD4-215ENST00000566843 SPTSSBQ8NFR3 76 aa9.5□□□□□ -0.89
COMMD4-215ENST00000566843 STAB2Q8WWQ8 2551 aa9.49□□□□□ -0.89
COMMD4-215ENST00000566843 A6NN06 94 aa9.49□□□□□ -0.89
COMMD4-215ENST00000566843 DNAH10Q8IVF4 4471 aa9.48□□□□□ -0.89
COMMD4-215ENST00000566843 A0A1B0GVX0 72 aa9.45□□□□□ -0.9
COMMD4-215ENST00000566843 HRES1P13985 223 aa9.44□□□□□ -0.9
COMMD4-215ENST00000566843 LINC00483Q53H64 154 aa9.44□□□□□ -0.9
COMMD4-215ENST00000566843 C7orf65Q6ZTY9 151 aa9.44□□□□□ -0.9
COMMD4-215ENST00000566843 SPAG11AQ6PDA7 123 aa9.44□□□□□ -0.9
COMMD4-215ENST00000566843 SRRM2Q9UQ35 2752 aaKnown RBP9.43□□□□□ -0.9
COMMD4-215ENST00000566843 TENM2Q9NT68 2774 aa9.43□□□□□ -0.9
COMMD4-215ENST00000566843 IGLV9-49A0A0B4J1Y8 123 aa9.42□□□□□ -0.9
COMMD4-215ENST00000566843 PANO1I0J062 215 aa9.42□□□□□ -0.9
COMMD4-215ENST00000566843 MRPL34Q9BQ48 92 aaKnown RBP9.42□□□□□ -0.9
COMMD4-215ENST00000566843 IGHV6-1A0A0B4J1U7 121 aa9.4□□□□□ -0.9
COMMD4-215ENST00000566843 C8orf87E5RJ46 101 aa9.4□□□□□ -0.9
COMMD4-215ENST00000566843 UBE2DNLQ8IWF7 75 aa9.4□□□□□ -0.9
COMMD4-215ENST00000566843 APLNQ9ULZ1 77 aa9.4□□□□□ -0.9
COMMD4-215ENST00000566843 FBN3Q75N90 2809 aa9.38□□□□□ -0.91
COMMD4-215ENST00000566843 CDK2AP2O75956 126 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms