RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 K7EIL1 84 aa8.99□□□□□ -0.97
CDH1-209ENST00000566510 LINC00336Q6ZUF6 198 aa8.99□□□□□ -0.97
CDH1-209ENST00000566510 KRTAP1-5Q9BYS1 174 aa8.99□□□□□ -0.97
CDH1-209ENST00000566510 A0A087WSZ3 146 aa8.98□□□□□ -0.97
CDH1-209ENST00000566510 C16orf90A8MZG2 172 aa8.98□□□□□ -0.97
CDH1-209ENST00000566510 HUWE1Q7Z6Z7 4374 aaKnown RBP8.98□□□□□ -0.97
CDH1-209ENST00000566510 HCG22E2RYF7 251 aa8.98□□□□□ -0.97
CDH1-209ENST00000566510 WFDC13Q8IUB5 93 aa8.97□□□□□ -0.97
CDH1-209ENST00000566510 UBE2AP49459 152 aa8.97□□□□□ -0.97
CDH1-209ENST00000566510 UBE2DNLQ8IWF7 75 aa8.97□□□□□ -0.97
CDH1-209ENST00000566510 CHTF8P0CG12 524 aa8.96□□□□□ -0.97
CDH1-209ENST00000566510 COL7A1Q02388 2944 aa8.95□□□□□ -0.98
CDH1-209ENST00000566510 RPL37AP61513 92 aaKnown RBP8.95□□□□□ -0.98
CDH1-209ENST00000566510 PHF5AQ7RTV0 110 aaKnown RBP8.94□□□□□ -0.98
CDH1-209ENST00000566510 LRCOL1A6NCL2 159 aa8.94□□□□□ -0.98
CDH1-209ENST00000566510 PRR4Q16378 134 aa8.92□□□□□ -0.98
CDH1-209ENST00000566510 LCE6AA0A183 80 aa8.91□□□□□ -0.98
CDH1-209ENST00000566510 CNBPP62633 177 aaKnown RBP8.91□□□□□ -0.98
CDH1-209ENST00000566510 KRTAP11-1Q8IUC1 163 aa8.91□□□□□ -0.98
CDH1-209ENST00000566510 DNAH9Q9NYC9 4486 aa8.89□□□□□ -0.99
CDH1-209ENST00000566510 BRK1Q8WUW1 75 aa8.88□□□□□ -0.99
CDH1-209ENST00000566510 PRO0628Q9UI54 55 aa8.88□□□□□ -0.99
CDH1-209ENST00000566510 C1orf64Q8NEQ6 169 aa8.87□□□□□ -0.99
CDH1-209ENST00000566510 ZCCHC13Q8WW36 166 aaKnown RBP8.87□□□□□ -0.99
CDH1-209ENST00000566510 IGLV8-61A0A075B6I0 122 aa8.87□□□□□ -0.99
CDH1-209ENST00000566510 hDV103S1A0JD37 113 aa8.85□□□□□ -0.99
CDH1-209ENST00000566510 MP68P56378 58 aa8.85□□□□□ -0.99
CDH1-209ENST00000566510 C14orf177Q52M58 125 aa8.85□□□□□ -0.99
CDH1-209ENST00000566510 DNAH7Q8WXX0 4024 aa8.84□□□□□ -0.99
CDH1-209ENST00000566510 C4orf48Q5BLP8 95 aa8.84□□□□□ -0.99
CDH1-209ENST00000566510 LINC00208Q96KT6 92 aa8.84□□□□□ -0.99
CDH1-209ENST00000566510 CASC2Q6XLA1 102 aa8.83□□□□□ -1
CDH1-209ENST00000566510 B9D2Q9BPU9 175 aa8.82□□□□□ -1
CDH1-209ENST00000566510 APLNQ9ULZ1 77 aa8.82□□□□□ -1
CDH1-209ENST00000566510 H0Y9J4 135 aa8.8□□□□□ -1
CDH1-209ENST00000566510 NDUFB1O75438 58 aa8.79□□□□□ -1
CDH1-209ENST00000566510 PRR15Q8IV56 129 aa8.79□□□□□ -1
CDH1-209ENST00000566510 C9orf163Q8N9P6 203 aa8.79□□□□□ -1
CDH1-209ENST00000566510 PKIGQ9Y2B9 76 aa8.78□□□□□ -1
CDH1-209ENST00000566510 KRTAP29-1A8MX34 341 aaPredicted RBP8.78□□□□□ -1
CDH1-209ENST00000566510 H0Y9P7 68 aa8.78□□□□□ -1
CDH1-209ENST00000566510 PANO1I0J062 215 aa8.78□□□□□ -1
CDH1-209ENST00000566510 TRAV22A0A0B4J277 110 aa8.77□□□□□ -1.01
CDH1-209ENST00000566510 A8MWP4 228 aa8.77□□□□□ -1.01
CDH1-209ENST00000566510 SPRR1BP22528 89 aa8.77□□□□□ -1.01
CDH1-209ENST00000566510 IGLV9-49A0A0B4J1Y8 123 aa8.77□□□□□ -1.01
CDH1-209ENST00000566510 LINC00472Q9H8W2 130 aa8.77□□□□□ -1.01
CDH1-209ENST00000566510 PSPHP1O15172 72 aa8.74□□□□□ -1.01
CDH1-209ENST00000566510 NBDYA0A0U1RRE5 68 aa8.73□□□□□ -1.01
CDH1-209ENST00000566510 CYP4F30PQ9H0H9 118 aa8.73□□□□□ -1.01
CDH1-209ENST00000566510 MDFIQ99750 246 aa8.72□□□□□ -1.01
CDH1-209ENST00000566510 Q1T7F1 81 aa8.71□□□□□ -1.02
CDH1-209ENST00000566510 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.69□□□□□ -1.02
CDH1-209ENST00000566510 PLECQ15149 4684 aaKnown RBP8.68□□□□□ -1.02
CDH1-209ENST00000566510 MMP24-AS1A0A0U1RRL7 71 aa8.67□□□□□ -1.02
CDH1-209ENST00000566510 KRTAP13-1Q8IUC0 172 aa8.67□□□□□ -1.02
CDH1-209ENST00000566510 H3BPC8 53 aa8.66□□□□□ -1.02
CDH1-209ENST00000566510 Q6ZRN7 208 aaPredicted RBP8.66□□□□□ -1.02
CDH1-209ENST00000566510 SPACA4Q8TDM5 124 aa8.64□□□□□ -1.03
CDH1-209ENST00000566510 ANAPC11Q9NYG5 84 aa8.63□□□□□ -1.03
CDH1-209ENST00000566510 NUPR2A6NF83 97 aa8.63□□□□□ -1.03
CDH1-209ENST00000566510 A8MUN3 132 aa8.63□□□□□ -1.03
CDH1-209ENST00000566510 NDUFS5O43920 106 aa8.63□□□□□ -1.03
CDH1-209ENST00000566510 SPANXA2-OT1Q8N9U9 137 aa8.63□□□□□ -1.03
CDH1-209ENST00000566510 PCOTHQ58A44 107 aa8.62□□□□□ -1.03
CDH1-209ENST00000566510 IGHV6-1A0A0B4J1U7 121 aa8.62□□□□□ -1.03
CDH1-209ENST00000566510 Q96NJ1 140 aa8.61□□□□□ -1.03
CDH1-209ENST00000566510 MOBPQ13875 183 aa8.61□□□□□ -1.03
CDH1-209ENST00000566510 C1orf195Q5TG92 126 aa8.59□□□□□ -1.03
CDH1-209ENST00000566510 FRAS1Q86XX4 4008 aa8.59□□□□□ -1.03
CDH1-209ENST00000566510 DYNC2H1Q8NCM8 4307 aaKnown RBP8.59□□□□□ -1.03
CDH1-209ENST00000566510 CDK2AP2O75956 126 aa8.59□□□□□ -1.03
CDH1-209ENST00000566510 PSORS1C2Q9UIG4 136 aa8.59□□□□□ -1.03
CDH1-209ENST00000566510 A0A087WTM6 91 aa8.58□□□□□ -1.04
CDH1-209ENST00000566510 V9GYY9 64 aa8.58□□□□□ -1.04
CDH1-209ENST00000566510 C8orf17Q9NRJ1 99 aa8.58□□□□□ -1.04
CDH1-209ENST00000566510 RTL8CO15255 209 aa8.57□□□□□ -1.04
CDH1-209ENST00000566510 ZNF706Q9Y5V0 76 aaPredicted RBP8.57□□□□□ -1.04
CDH1-209ENST00000566510 LINC00483Q53H64 154 aa8.56□□□□□ -1.04
CDH1-209ENST00000566510 WWC2-AS2Q96NR7 200 aa8.55□□□□□ -1.04
CDH1-209ENST00000566510 TP53AIP1Q9HCN2 124 aa8.55□□□□□ -1.04
CDH1-209ENST00000566510 STARD9Q9P2P6 4700 aa8.55□□□□□ -1.04
CDH1-209ENST00000566510 TGP01266 2768 aa8.55□□□□□ -1.04
CDH1-209ENST00000566510 IGLV5-52A0A0A0MRZ9 124 aa8.54□□□□□ -1.04
CDH1-209ENST00000566510 A0A1B0GVX0 72 aa8.54□□□□□ -1.04
CDH1-209ENST00000566510 COA5Q86WW8 74 aa8.54□□□□□ -1.04
CDH1-209ENST00000566510 Q8N9P0 234 aaPredicted RBP8.54□□□□□ -1.04
CDH1-209ENST00000566510 HECTD4Q9Y4D8 3996 aa8.53□□□□□ -1.04
CDH1-209ENST00000566510 IGLV7-46A0A075B6I9 117 aa8.53□□□□□ -1.04
CDH1-209ENST00000566510 SPINK6Q6UWN8 80 aa8.53□□□□□ -1.04
CDH1-209ENST00000566510 PRR15LQ9BU68 103 aa8.53□□□□□ -1.04
CDH1-209ENST00000566510 KMT2AQ03164 3969 aa8.52□□□□□ -1.05
CDH1-209ENST00000566510 CD164Q04900 197 aa8.52□□□□□ -1.05
CDH1-209ENST00000566510 Q5VV11 94 aa8.52□□□□□ -1.05
CDH1-209ENST00000566510 CHKB-CPT1BH3BT56 60 aa8.51□□□□□ -1.05
CDH1-209ENST00000566510 ZNF861PO60384 105 aa8.51□□□□□ -1.05
CDH1-209ENST00000566510 A0A087X002 238 aa8.51□□□□□ -1.05
CDH1-209ENST00000566510 NOTCH2NLQ7Z3S9 236 aa8.51□□□□□ -1.05
CDH1-209ENST00000566510 ASB16-AS1Q495Z4 193 aa8.5□□□□□ -1.05
CDH1-209ENST00000566510 LIMD2Q9BT23 127 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms