RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 C12orf57Q99622 126 aa7.49□□□□□ -1.21
COMMD4-214ENST00000566230 LINC00575Q6W349 94 aa7.48□□□□□ -1.21
COMMD4-214ENST00000566230 UQCR10Q9UDW1 63 aa7.48□□□□□ -1.21
COMMD4-214ENST00000566230 IGLV5-48A0A075B6I7 105 aa7.47□□□□□ -1.21
COMMD4-214ENST00000566230 hADV29S1A0JD25 119 aa7.46□□□□□ -1.22
COMMD4-214ENST00000566230 RPS29P62273 56 aaKnown RBP7.46□□□□□ -1.22
COMMD4-214ENST00000566230 C9orf153Q5TBE3 101 aa7.46□□□□□ -1.22
COMMD4-214ENST00000566230 PRO1854Q9UHT4 67 aa7.46□□□□□ -1.22
COMMD4-214ENST00000566230 H0YGX0 51 aa7.45□□□□□ -1.22
COMMD4-214ENST00000566230 SNCGO76070 127 aa7.45□□□□□ -1.22
COMMD4-214ENST00000566230 HSD52Q0P140 79 aa7.45□□□□□ -1.22
COMMD4-214ENST00000566230 KRTAP19-2Q3LHN2 52 aa7.44□□□□□ -1.22
COMMD4-214ENST00000566230 H7C2G1 150 aa7.43□□□□□ -1.22
COMMD4-214ENST00000566230 SMIM29Q86T20 159 aa7.43□□□□□ -1.22
COMMD4-214ENST00000566230 Q8N377 158 aa7.43□□□□□ -1.22
COMMD4-214ENST00000566230 FXYD2P54710 66 aa7.42□□□□□ -1.22
COMMD4-214ENST00000566230 Q1RN00 199 aa7.42□□□□□ -1.22
COMMD4-214ENST00000566230 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.42□□□□□ -1.22
COMMD4-214ENST00000566230 PRO1933Q9H354 126 aa7.42□□□□□ -1.22
COMMD4-214ENST00000566230 XP32Q5T750 250 aa7.41□□□□□ -1.22
COMMD4-214ENST00000566230 MT1HP80294 61 aa7.4□□□□□ -1.22
COMMD4-214ENST00000566230 CD164Q04900 197 aa7.4□□□□□ -1.22
COMMD4-214ENST00000566230 Q6ZQY7 126 aa7.4□□□□□ -1.22
COMMD4-214ENST00000566230 PPDPFLQ8WWR9 84 aa7.4□□□□□ -1.22
COMMD4-214ENST00000566230 OCIAD2Q56VL3 154 aa7.39□□□□□ -1.23
COMMD4-214ENST00000566230 A0A1B0GX51 115 aa7.38□□□□□ -1.23
COMMD4-214ENST00000566230 SMIM6P0DI80 62 aa7.38□□□□□ -1.23
COMMD4-214ENST00000566230 GHRHP01286 108 aa7.37□□□□□ -1.23
COMMD4-214ENST00000566230 F8WEM9 126 aa7.36□□□□□ -1.23
COMMD4-214ENST00000566230 COX6CP09669 75 aa7.35□□□□□ -1.23
COMMD4-214ENST00000566230 LIMD2Q9BT23 127 aa7.35□□□□□ -1.23
COMMD4-214ENST00000566230 SNHG12Q9BXW3 62 aa7.35□□□□□ -1.23
COMMD4-214ENST00000566230 IGLV8-61A0A075B6I0 122 aa7.33□□□□□ -1.24
COMMD4-214ENST00000566230 LORP23490 312 aaPredicted RBP7.33□□□□□ -1.24
COMMD4-214ENST00000566230 PSMB2P49721 201 aa7.33□□□□□ -1.24
COMMD4-214ENST00000566230 Q6JHZ5 121 aa7.33□□□□□ -1.24
COMMD4-214ENST00000566230 HRCT1Q6UXD1 115 aa7.33□□□□□ -1.24
COMMD4-214ENST00000566230 LOC105371267A0A1B0GV96 52 aa7.32□□□□□ -1.24
COMMD4-214ENST00000566230 TRIAP1O43715 76 aa7.32□□□□□ -1.24
COMMD4-214ENST00000566230 Q5XG85 94 aa7.32□□□□□ -1.24
COMMD4-214ENST00000566230 FAM218AQ96MZ4 157 aa7.32□□□□□ -1.24
COMMD4-214ENST00000566230 KRTAP10-6P60371 365 aaPredicted RBP7.31□□□□□ -1.24
COMMD4-214ENST00000566230 H3BQ85 93 aa7.3□□□□□ -1.24
COMMD4-214ENST00000566230 K7ERJ3 54 aa7.3□□□□□ -1.24
COMMD4-214ENST00000566230 M0R143 59 aa7.3□□□□□ -1.24
COMMD4-214ENST00000566230 TSTD3H0UI37 97 aa7.29□□□□□ -1.24
COMMD4-214ENST00000566230 PCOTHQ58A44 107 aa7.29□□□□□ -1.24
COMMD4-214ENST00000566230 NDUFV3P56181 108 aaKnown RBP7.28□□□□□ -1.24
COMMD4-214ENST00000566230 A0A0G2JQZ4 141 aa7.27□□□□□ -1.25
COMMD4-214ENST00000566230 DNAL4O96015 105 aa7.27□□□□□ -1.25
COMMD4-214ENST00000566230 SCGB1C2P0DMR2 95 aa7.27□□□□□ -1.25
COMMD4-214ENST00000566230 CLEC2BQ92478 149 aa7.27□□□□□ -1.25
COMMD4-214ENST00000566230 TCL1BO95988 128 aa7.26□□□□□ -1.25
COMMD4-214ENST00000566230 IGFL1Q6UW32 110 aa7.26□□□□□ -1.25
COMMD4-214ENST00000566230 FABP2P12104 132 aa7.25□□□□□ -1.25
COMMD4-214ENST00000566230 ORMDL1Q9P0S3 153 aa7.25□□□□□ -1.25
COMMD4-214ENST00000566230 TMEM256-PLSCR3K7ERE1 68 aa7.24□□□□□ -1.25
COMMD4-214ENST00000566230 H3BMG7 143 aa7.23□□□□□ -1.25
COMMD4-214ENST00000566230 TRACP01848 142 aa7.23□□□□□ -1.25
COMMD4-214ENST00000566230 FLGP20930 4061 aaPredicted RBP7.22□□□□□ -1.25
COMMD4-214ENST00000566230 TRBV7-7A0A0K0K1E9 115 aa7.22□□□□□ -1.25
COMMD4-214ENST00000566230 C9orf92A6NGG3 77 aa7.21□□□□□ -1.26
COMMD4-214ENST00000566230 H3BUT2 72 aa7.21□□□□□ -1.26
COMMD4-214ENST00000566230 C1orf195Q5TG92 126 aa7.21□□□□□ -1.26
COMMD4-214ENST00000566230 Q6Q795 121 aa7.21□□□□□ -1.26
COMMD4-214ENST00000566230 TEN1Q86WV5 123 aa7.21□□□□□ -1.26
COMMD4-214ENST00000566230 LST1O00453 97 aa7.2□□□□□ -1.26
COMMD4-214ENST00000566230 UBE2V1Q13404 147 aa7.19□□□□□ -1.26
COMMD4-214ENST00000566230 M0R2T5 61 aa7.18□□□□□ -1.26
COMMD4-214ENST00000566230 ANKRD29Q8N6D5 301 aa7.17□□□□□ -1.26
COMMD4-214ENST00000566230 SS18L2Q9UHA2 77 aa7.16□□□□□ -1.26
COMMD4-214ENST00000566230 BAALC-AS2P0C853 105 aa7.15□□□□□ -1.26
COMMD4-214ENST00000566230 KRTAP9-7A8MTY7 169 aa7.14□□□□□ -1.27
COMMD4-214ENST00000566230 ATXN8Q156A1 80 aa7.14□□□□□ -1.27
COMMD4-214ENST00000566230 BATFQ16520 125 aa7.13□□□□□ -1.27
COMMD4-214ENST00000566230 LYRM7Q5U5X0 104 aa7.13□□□□□ -1.27
COMMD4-214ENST00000566230 TRBV20-1A0A075B6N2 111 aa7.12□□□□□ -1.27
COMMD4-214ENST00000566230 TRBV7-4A0A0J9YYF1 115 aa7.12□□□□□ -1.27
COMMD4-214ENST00000566230 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.12□□□□□ -1.27
COMMD4-214ENST00000566230 RBM3P98179 157 aaKnown RBP7.12□□□□□ -1.27
COMMD4-214ENST00000566230 A0A1W2PNM2 257 aa7.11□□□□□ -1.27
COMMD4-214ENST00000566230 COX6B2Q6YFQ2 88 aa7.11□□□□□ -1.27
COMMD4-214ENST00000566230 NAA38Q9BRA0 125 aaKnown RBP7.11□□□□□ -1.27
COMMD4-214ENST00000566230 A0A087WSZ3 146 aa7.09□□□□□ -1.27
COMMD4-214ENST00000566230 C9orf118A6NHY6 69 aa7.09□□□□□ -1.27
COMMD4-214ENST00000566230 DSCR8Q96T75 97 aa7.09□□□□□ -1.27
COMMD4-214ENST00000566230 JMJD7-PLA2G4BH0Y9G9 81 aa7.07□□□□□ -1.28
COMMD4-214ENST00000566230 CCKP06307 115 aa7.07□□□□□ -1.28
COMMD4-214ENST00000566230 RPL37P61927 97 aaKnown RBP7.07□□□□□ -1.28
COMMD4-214ENST00000566230 SSPOA2VEC9 5147 aa7.07□□□□□ -1.28
COMMD4-214ENST00000566230 C9JAW5 83 aa7.06□□□□□ -1.28
COMMD4-214ENST00000566230 A0A1B0GV72 72 aa7.05□□□□□ -1.28
COMMD4-214ENST00000566230 TAX1BP3O14907 124 aa7.05□□□□□ -1.28
COMMD4-214ENST00000566230 C21orf62-AS1Q17RA5 79 aa7.05□□□□□ -1.28
COMMD4-214ENST00000566230 USH2AO75445 5202 aa7.05□□□□□ -1.28
COMMD4-214ENST00000566230 A0A1W2PPM0 123 aa7.03□□□□□ -1.28
COMMD4-214ENST00000566230 A0A1B0GW54 56 aa7.02□□□□□ -1.29
COMMD4-214ENST00000566230 PDE6GP18545 87 aa7.02□□□□□ -1.29
COMMD4-214ENST00000566230 Q96NJ1 140 aa7.02□□□□□ -1.29
COMMD4-214ENST00000566230 VPS25Q9BRG1 176 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms