RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 FAM19A5Q7Z5A7 132 aaPredicted RBP2.65□□□□□ -1.98
LINC00561-201ENST00000565815 IGKV3D-7A0A0C4DH55 119 aa2.65□□□□□ -1.99
LINC00561-201ENST00000565815 A0A1B0GW54 56 aa2.65□□□□□ -1.99
LINC00561-201ENST00000565815 NCR3O14931 201 aa2.65□□□□□ -1.99
LINC00561-201ENST00000565815 ERC2-IT1O76042 136 aa2.65□□□□□ -1.99
LINC00561-201ENST00000565815 CHTF8P0CG12 524 aa2.65□□□□□ -1.99
LINC00561-201ENST00000565815 HYDINQ4G0P3 5121 aa2.65□□□□□ -1.99
LINC00561-201ENST00000565815 KIAA0087Q14695 138 aa2.64□□□□□ -1.99
LINC00561-201ENST00000565815 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.64□□□□□ -1.99
LINC00561-201ENST00000565815 Q6ZQT0 140 aa2.64□□□□□ -1.99
LINC00561-201ENST00000565815 SERP1Q9Y6X1 66 aa2.64□□□□□ -1.99
LINC00561-201ENST00000565815 LYSTQ99698 3801 aa2.64□□□□□ -1.99
LINC00561-201ENST00000565815 KLKP1Q107X0 134 aa2.64□□□□□ -1.99
LINC00561-201ENST00000565815 NKAPP1Q8N9T2 125 aa2.64□□□□□ -1.99
LINC00561-201ENST00000565815 DSCR8Q96T75 97 aa2.64□□□□□ -1.99
LINC00561-201ENST00000565815 DEFB131BA0A096LNP1 70 aa2.63□□□□□ -1.99
LINC00561-201ENST00000565815 FAM236DA0A1B0GTK5 79 aa2.63□□□□□ -1.99
LINC00561-201ENST00000565815 KRTAP9-6A8MVA2 160 aa2.63□□□□□ -1.99
LINC00561-201ENST00000565815 IGLV6-57P01721 117 aa2.63□□□□□ -1.99
LINC00561-201ENST00000565815 FAM236CP0DP71 79 aa2.63□□□□□ -1.99
LINC00561-201ENST00000565815 PLECQ15149 4684 aaKnown RBP2.63□□□□□ -1.99
LINC00561-201ENST00000565815 DNAH6Q9C0G6 4158 aa2.63□□□□□ -1.99
LINC00561-201ENST00000565815 XCL1P47992 114 aa2.63□□□□□ -1.99
LINC00561-201ENST00000565815 PCLOQ9Y6V0 5065 aa2.63□□□□□ -1.99
LINC00561-201ENST00000565815 IGKV3OR2-268A0A0C4DH90 116 aa2.62□□□□□ -1.99
LINC00561-201ENST00000565815 KRTAP12-2P59991 146 aa2.62□□□□□ -1.99
LINC00561-201ENST00000565815 C6orf99Q4VX62 202 aa2.62□□□□□ -1.99
LINC00561-201ENST00000565815 DIRC1Q969H9 104 aa2.62□□□□□ -1.99
LINC00561-201ENST00000565815 A8MU10 97 aa2.62□□□□□ -1.99
LINC00561-201ENST00000565815 KRTAP4-16G5E9R7 235 aaPredicted RBP2.62□□□□□ -1.99
LINC00561-201ENST00000565815 LELP1Q5T871 98 aa2.62□□□□□ -1.99
LINC00561-201ENST00000565815 ENHOQ6UWT2 76 aa2.62□□□□□ -1.99
LINC00561-201ENST00000565815 Q8NAQ8 132 aa2.62□□□□□ -1.99
LINC00561-201ENST00000565815 DNAH10Q8IVF4 4471 aa2.62□□□□□ -1.99
LINC00561-201ENST00000565815 A0A087WVE0 104 aa2.62□□□□□ -1.99
LINC00561-201ENST00000565815 TRBV7-4A0A0J9YYF1 115 aa2.62□□□□□ -1.99
LINC00561-201ENST00000565815 OXTP01178 125 aa2.62□□□□□ -1.99
LINC00561-201ENST00000565815 SPART-AS1P0CW21 52 aa2.62□□□□□ -1.99
LINC00561-201ENST00000565815 WFDC10AQ9H1F0 79 aa2.62□□□□□ -1.99
LINC00561-201ENST00000565815 LAMTOR3Q9UHA4 124 aa2.62□□□□□ -1.99
LINC00561-201ENST00000565815 COX7BP24311 80 aa2.61□□□□□ -1.99
LINC00561-201ENST00000565815 SPAG11BQ08648 103 aa2.61□□□□□ -1.99
LINC00561-201ENST00000565815 TRAV23DV6A0A075B6W5 121 aa2.61□□□□□ -1.99
LINC00561-201ENST00000565815 SMIM26A0A096LP01 95 aa2.61□□□□□ -1.99
LINC00561-201ENST00000565815 NBDYA0A0U1RRE5 68 aa2.61□□□□□ -1.99
LINC00561-201ENST00000565815 H3BNG1 76 aa2.61□□□□□ -1.99
LINC00561-201ENST00000565815 H7BZZ5 65 aa2.6□□□□□ -1.99
LINC00561-201ENST00000565815 M0R2N4 97 aa2.6□□□□□ -1.99
LINC00561-201ENST00000565815 ANGP03950 147 aaKnown RBP2.6□□□□□ -1.99
LINC00561-201ENST00000565815 DEFB130BP0DP73 79 aa2.6□□□□□ -1.99
LINC00561-201ENST00000565815 DEFB130AP0DP74 79 aa2.6□□□□□ -1.99
LINC00561-201ENST00000565815 ELOF1P60002 83 aaKnown RBP2.6□□□□□ -1.99
LINC00561-201ENST00000565815 LINC00269Q8N2A0 174 aa2.6□□□□□ -1.99
LINC00561-201ENST00000565815 STARD9Q9P2P6 4700 aa2.6□□□□□ -1.99
LINC00561-201ENST00000565815 M0R378 163 aa2.6□□□□□ -1.99
LINC00561-201ENST00000565815 Q5VSD8 79 aa2.6□□□□□ -1.99
LINC00561-201ENST00000565815 FAM19A1Q7Z5A9 133 aa2.6□□□□□ -1.99
LINC00561-201ENST00000565815 C20orf197Q8N268 126 aa2.6□□□□□ -1.99
LINC00561-201ENST00000565815 ZNF73O43830 326 aaPredicted RBP2.59□□□□□ -1.99
LINC00561-201ENST00000565815 DAD1P61803 113 aa2.59□□□□□ -1.99
LINC00561-201ENST00000565815 Q5XG85 94 aa2.59□□□□□ -1.99
LINC00561-201ENST00000565815 Q6ZQY7 126 aa2.59□□□□□ -1.99
LINC00561-201ENST00000565815 DNAH11Q96DT5 4516 aa2.59□□□□□ -1.99
LINC00561-201ENST00000565815 CYSTM1Q9H1C7 97 aa2.59□□□□□ -2
LINC00561-201ENST00000565815 HECTD4Q9Y4D8 3996 aa2.59□□□□□ -2
LINC00561-201ENST00000565815 DYNC1H1Q14204 4646 aaKnown RBP2.58□□□□□ -2
LINC00561-201ENST00000565815 HAMPP81172 84 aa2.58□□□□□ -2
LINC00561-201ENST00000565815 DNAH17Q9UFH2 4485 aa2.58□□□□□ -2
LINC00561-201ENST00000565815 ANAPC11Q9NYG5 84 aa2.58□□□□□ -2
LINC00561-201ENST00000565815 PRO0628Q9UI54 55 aa2.58□□□□□ -2
LINC00561-201ENST00000565815 KIAA1109Q2LD37 5005 aa2.57□□□□□ -2
LINC00561-201ENST00000565815 UNQ6190/PRO20217Q6UXQ8 127 aa2.57□□□□□ -2
LINC00561-201ENST00000565815 PRR3P79522 188 aaKnown RBP2.57□□□□□ -2
LINC00561-201ENST00000565815 NREPQ16612 68 aa2.57□□□□□ -2
LINC00561-201ENST00000565815 C6orf48Q9UBA6 75 aa2.57□□□□□ -2
LINC00561-201ENST00000565815 BPY2O14599 106 aa2.56□□□□□ -2
LINC00561-201ENST00000565815 CLPSL2Q6UWE3 100 aa2.56□□□□□ -2
LINC00561-201ENST00000565815 C9orf116Q5BN46 136 aaPredicted RBP2.56□□□□□ -2
LINC00561-201ENST00000565815 Q8NDZ9 215 aa2.56□□□□□ -2
LINC00561-201ENST00000565815 TMEM254Q8TBM7 123 aa2.56□□□□□ -2
LINC00561-201ENST00000565815 KCNQ1DNQ9H478 68 aa2.56□□□□□ -2
LINC00561-201ENST00000565815 IGLV5-48A0A075B6I7 105 aa2.55□□□□□ -2
LINC00561-201ENST00000565815 A0A096LPF7 62 aa2.55□□□□□ -2
LINC00561-201ENST00000565815 F8WEM9 126 aa2.55□□□□□ -2
LINC00561-201ENST00000565815 TLX1NBP0CAT3 122 aa2.55□□□□□ -2
LINC00561-201ENST00000565815 FUSP35637 526 aaKnown RBP eCLIP2.55□□□□□ -2
LINC00561-201ENST00000565815 CAMK2N2Q96S95 79 aa2.55□□□□□ -2
LINC00561-201ENST00000565815 RYR1P21817 5038 aa2.55□□□□□ -2
LINC00561-201ENST00000565815 IGLV10-54A0A075B6I4 117 aa2.55□□□□□ -2
LINC00561-201ENST00000565815 A0A0U1RQV1 116 aa2.55□□□□□ -2
LINC00561-201ENST00000565815 H0Y9J4 135 aa2.55□□□□□ -2
LINC00561-201ENST00000565815 C4orf26Q17RF5 130 aa2.55□□□□□ -2
LINC00561-201ENST00000565815 HRCT1Q6UXD1 115 aa2.55□□□□□ -2
LINC00561-201ENST00000565815 KLK12Q9UKR0 248 aa2.55□□□□□ -2
LINC00561-201ENST00000565815 IGKV4-1P06312 121 aa2.55□□□□□ -2
LINC00561-201ENST00000565815 DEFB4AO15263 64 aa2.54□□□□□ -2
LINC00561-201ENST00000565815 KRTAP5-9P26371 169 aa2.54□□□□□ -2
LINC00561-201ENST00000565815 LINC01556Q5JQF7 62 aa2.54□□□□□ -2
LINC00561-201ENST00000565815 KRTAP26-1Q6PEX3 210 aa2.54□□□□□ -2
LINC00561-201ENST00000565815 RMI2Q96E14 147 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms