RNA–Protein interactions for RNA: ENST00000565298.5

IFT140-206, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 4,727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-206ENST00000565298 VPS13AQ96RL7 3174 aa11.95□□□□□ -0.5
IFT140-206ENST00000565298 IGLV7-46A0A075B6I9 117 aa11.91□□□□□ -0.5
IFT140-206ENST00000565298 NBEAL2Q6ZNJ1 2754 aa11.91□□□□□ -0.5
IFT140-206ENST00000565298 COA5Q86WW8 74 aa11.9□□□□□ -0.5
IFT140-206ENST00000565298 KRTAP1-5Q9BYS1 174 aa11.89□□□□□ -0.51
IFT140-206ENST00000565298 IGLV8-61A0A075B6I0 122 aa11.88□□□□□ -0.51
IFT140-206ENST00000565298 LINC01600Q96MT4 127 aa11.88□□□□□ -0.51
IFT140-206ENST00000565298 FRYQ5TBA9 3013 aa11.88□□□□□ -0.51
IFT140-206ENST00000565298 KLKP1Q107X0 134 aa11.88□□□□□ -0.51
IFT140-206ENST00000565298 SPRR1AP35321 89 aa11.87□□□□□ -0.51
IFT140-206ENST00000565298 Q6ZSA8 131 aa11.84□□□□□ -0.51
IFT140-206ENST00000565298 HIVEP1P15822 2718 aa11.82□□□□□ -0.52
IFT140-206ENST00000565298 SZT2Q5T011 3432 aa11.82□□□□□ -0.52
IFT140-206ENST00000565298 LAMA1P25391 3075 aa11.81□□□□□ -0.52
IFT140-206ENST00000565298 TACC2O95359 2948 aa11.81□□□□□ -0.52
IFT140-206ENST00000565298 FRYLO94915 3013 aa11.8□□□□□ -0.52
IFT140-206ENST00000565298 DNAH14Q0VDD8 3507 aa11.78□□□□□ -0.52
IFT140-206ENST00000565298 UQCR11O14957 56 aa11.78□□□□□ -0.52
IFT140-206ENST00000565298 FLG2Q5D862 2391 aaPredicted RBP11.77□□□□□ -0.52
IFT140-206ENST00000565298 VCANP13611 3396 aa11.77□□□□□ -0.52
IFT140-206ENST00000565298 KRTAP26-1Q6PEX3 210 aa11.77□□□□□ -0.53
IFT140-206ENST00000565298 SPRR1BP22528 89 aa11.76□□□□□ -0.53
IFT140-206ENST00000565298 ATMQ13315 3056 aa11.75□□□□□ -0.53
IFT140-206ENST00000565298 DMBT1Q9UGM3 2413 aaPredicted RBP11.75□□□□□ -0.53
IFT140-206ENST00000565298 COL12A1Q99715 3063 aa11.74□□□□□ -0.53
IFT140-206ENST00000565298 REV3LO60673 3130 aa11.74□□□□□ -0.53
IFT140-206ENST00000565298 CELSR3Q9NYQ7 3312 aa11.73□□□□□ -0.53
IFT140-206ENST00000565298 TENM4Q6N022 2769 aa11.73□□□□□ -0.53
IFT140-206ENST00000565298 CYP4F30PQ9H0H9 118 aa11.73□□□□□ -0.53
IFT140-206ENST00000565298 Q8NDZ9 215 aa11.71□□□□□ -0.53
IFT140-206ENST00000565298 KRTAP10-1P60331 282 aa11.71□□□□□ -0.54
IFT140-206ENST00000565298 PRO0628Q9UI54 55 aa11.71□□□□□ -0.54
IFT140-206ENST00000565298 Q5VSD8 79 aa11.7□□□□□ -0.54
IFT140-206ENST00000565298 Q6ZR54 194 aa11.69□□□□□ -0.54
IFT140-206ENST00000565298 SPANXA2-OT1Q8N9U9 137 aa11.69□□□□□ -0.54
IFT140-206ENST00000565298 KRTAP21-3Q3LHN1 58 aa11.69□□□□□ -0.54
IFT140-206ENST00000565298 Q8N1X5 172 aa11.68□□□□□ -0.54
IFT140-206ENST00000565298 KRTAP10-2P60368 255 aa11.68□□□□□ -0.54
IFT140-206ENST00000565298 KMT2BQ9UMN6 2715 aaPredicted RBP11.66□□□□□ -0.54
IFT140-206ENST00000565298 A8MUN3 132 aa11.66□□□□□ -0.54
IFT140-206ENST00000565298 H7BZZ5 65 aa11.65□□□□□ -0.54
IFT140-206ENST00000565298 C4orf26Q17RF5 130 aa11.61□□□□□ -0.55
IFT140-206ENST00000565298 NIPBLQ6KC79 2804 aaeCLIP11.59□□□□□ -0.55
IFT140-206ENST00000565298 OCR1Q9BZK8 76 aa11.59□□□□□ -0.55
IFT140-206ENST00000565298 UTP20O75691 2785 aaKnown RBP11.59□□□□□ -0.55
IFT140-206ENST00000565298 NBEAQ8NFP9 2946 aa11.57□□□□□ -0.56
IFT140-206ENST00000565298 MIR22HGQ0VDD5 57 aa11.57□□□□□ -0.56
IFT140-206ENST00000565298 DMXL2Q8TDJ6 3036 aa11.56□□□□□ -0.56
IFT140-206ENST00000565298 ZCCHC13Q8WW36 166 aaKnown RBP11.56□□□□□ -0.56
IFT140-206ENST00000565298 APCP25054 2843 aa11.55□□□□□ -0.56
IFT140-206ENST00000565298 SEC61BP60468 96 aaKnown RBP11.54□□□□□ -0.56
IFT140-206ENST00000565298 SPEGQ15772 3267 aa11.54□□□□□ -0.56
IFT140-206ENST00000565298 MMP24-AS1A0A0U1RRL7 71 aa11.54□□□□□ -0.56
IFT140-206ENST00000565298 M0R2T5 61 aa11.53□□□□□ -0.56
IFT140-206ENST00000565298 LINC01554Q52M75 96 aa11.52□□□□□ -0.57
IFT140-206ENST00000565298 LINC00472Q9H8W2 130 aa11.51□□□□□ -0.57
IFT140-206ENST00000565298 FREM2Q5SZK8 3169 aa11.47□□□□□ -0.57
IFT140-206ENST00000565298 HRES1P13985 223 aa11.47□□□□□ -0.57
IFT140-206ENST00000565298 ZZEF1O43149 2961 aa11.46□□□□□ -0.58
IFT140-206ENST00000565298 ADGRG4Q8IZF6 3080 aa11.45□□□□□ -0.58
IFT140-206ENST00000565298 CRIPTQ9P021 101 aa11.45□□□□□ -0.58
IFT140-206ENST00000565298 PANO1I0J062 215 aa11.44□□□□□ -0.58
IFT140-206ENST00000565298 LINC00483Q53H64 154 aa11.44□□□□□ -0.58
IFT140-206ENST00000565298 CSAG1Q6PB30 78 aa11.41□□□□□ -0.58
IFT140-206ENST00000565298 FP248Q71RG6 208 aaPredicted RBP11.41□□□□□ -0.58
IFT140-206ENST00000565298 BOD1L1Q8NFC6 3051 aa11.41□□□□□ -0.58
IFT140-206ENST00000565298 SPINT4Q6UDR6 99 aa11.4□□□□□ -0.58
IFT140-206ENST00000565298 KALRNO60229 2985 aa11.4□□□□□ -0.58
IFT140-206ENST00000565298 LRBAP50851 2863 aa11.39□□□□□ -0.59
IFT140-206ENST00000565298 SPINK7P58062 85 aa11.38□□□□□ -0.59
IFT140-206ENST00000565298 KRTAP4-16G5E9R7 235 aaPredicted RBP11.38□□□□□ -0.59
IFT140-206ENST00000565298 A0A0D9SG42 100 aa11.37□□□□□ -0.59
IFT140-206ENST00000565298 Q6ZRN7 208 aaPredicted RBP11.37□□□□□ -0.59
IFT140-206ENST00000565298 EYSQ5T1H1 3165 aa11.37□□□□□ -0.59
IFT140-206ENST00000565298 TNRC18O15417 2968 aaPredicted RBP11.36□□□□□ -0.59
IFT140-206ENST00000565298 Q8N9P0 234 aaPredicted RBP11.35□□□□□ -0.59
IFT140-206ENST00000565298 COL6A3P12111 3177 aa11.35□□□□□ -0.59
IFT140-206ENST00000565298 OXTP01178 125 aa11.35□□□□□ -0.59
IFT140-206ENST00000565298 Q5W150 140 aa11.33□□□□□ -0.6
IFT140-206ENST00000565298 CELSR2Q9HCU4 2923 aa11.32□□□□□ -0.6
IFT140-206ENST00000565298 CDC42SE1Q9NRR8 79 aa11.28□□□□□ -0.6
IFT140-206ENST00000565298 ZANQ9Y493 2812 aa11.28□□□□□ -0.6
IFT140-206ENST00000565298 CRYBG3Q68DQ2 2970 aa11.27□□□□□ -0.61
IFT140-206ENST00000565298 CAMK2N1Q7Z7J9 78 aa11.27□□□□□ -0.61
IFT140-206ENST00000565298 S4R3F8 94 aa11.26□□□□□ -0.61
IFT140-206ENST00000565298 A0A1B0GU33 70 aa11.26□□□□□ -0.61
IFT140-206ENST00000565298 A0A087X002 238 aa11.25□□□□□ -0.61
IFT140-206ENST00000565298 ASH1LQ9NR48 2969 aaKnown RBP11.22□□□□□ -0.61
IFT140-206ENST00000565298 DCHS2Q6V1P9 2916 aa11.21□□□□□ -0.62
IFT140-206ENST00000565298 SPTBN5Q9NRC6 3674 aaKnown RBP11.15□□□□□ -0.62
IFT140-206ENST00000565298 RPS29P62273 56 aaKnown RBP11.14□□□□□ -0.63
IFT140-206ENST00000565298 Q1T7F1 81 aa11.13□□□□□ -0.63
IFT140-206ENST00000565298 MYO15AQ9UKN7 3530 aa11.12□□□□□ -0.63
IFT140-206ENST00000565298 DMXL1Q9Y485 3027 aa11.11□□□□□ -0.63
IFT140-206ENST00000565298 R4GN34 69 aa11.1□□□□□ -0.63
IFT140-206ENST00000565298 ASB16-AS1Q495Z4 193 aa11.09□□□□□ -0.63
IFT140-206ENST00000565298 CFAP47Q6ZTR5 3102 aa11.09□□□□□ -0.63
IFT140-206ENST00000565298 KRTAP11-1Q8IUC1 163 aa11.08□□□□□ -0.64
IFT140-206ENST00000565298 DMAC1Q96GE9 116 aa11.07□□□□□ -0.64
IFT140-206ENST00000565298 LINC01558Q9Y6Z2 57 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 202 ms