RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 LINC00208Q96KT6 92 aa13.08□□□□□ -0.32
MAP1LC3B-206ENST00000564844 KRTAP4-16G5E9R7 235 aaPredicted RBP13.08□□□□□ -0.32
MAP1LC3B-206ENST00000564844 C11orf45Q8TAV5 145 aa13.07□□□□□ -0.32
MAP1LC3B-206ENST00000564844 MRPL55Q7Z7F7 128 aaKnown RBP13.07□□□□□ -0.32
MAP1LC3B-206ENST00000564844 LINC01556Q5JQF7 62 aa13.06□□□□□ -0.32
MAP1LC3B-206ENST00000564844 A8MUN3 132 aa13.06□□□□□ -0.32
MAP1LC3B-206ENST00000564844 TRAV22A0A0B4J277 110 aa13.05□□□□□ -0.32
MAP1LC3B-206ENST00000564844 IGFL1Q6UW32 110 aa13.03□□□□□ -0.32
MAP1LC3B-206ENST00000564844 ZCCHC13Q8WW36 166 aaKnown RBP13.02□□□□□ -0.32
MAP1LC3B-206ENST00000564844 SPRR4Q96PI1 79 aa13.02□□□□□ -0.33
MAP1LC3B-206ENST00000564844 LYSTQ99698 3801 aa13□□□□□ -0.33
MAP1LC3B-206ENST00000564844 DNAH10Q8IVF4 4471 aa12.99□□□□□ -0.33
MAP1LC3B-206ENST00000564844 REG3GQ6UW15 175 aa12.99□□□□□ -0.33
MAP1LC3B-206ENST00000564844 PRR15Q8IV56 129 aa12.98□□□□□ -0.33
MAP1LC3B-206ENST00000564844 LCE6AA0A183 80 aa12.97□□□□□ -0.33
MAP1LC3B-206ENST00000564844 SPRR1AP35321 89 aa12.97□□□□□ -0.33
MAP1LC3B-206ENST00000564844 LINC00588Q9Y4M8 146 aa12.96□□□□□ -0.34
MAP1LC3B-206ENST00000564844 MP68P56378 58 aa12.95□□□□□ -0.34
MAP1LC3B-206ENST00000564844 H3BNG1 76 aa12.94□□□□□ -0.34
MAP1LC3B-206ENST00000564844 Q1T7F1 81 aa12.94□□□□□ -0.34
MAP1LC3B-206ENST00000564844 DNAH10OSP0CZ25 163 aa12.9□□□□□ -0.35
MAP1LC3B-206ENST00000564844 B9D2Q9BPU9 175 aa12.9□□□□□ -0.35
MAP1LC3B-206ENST00000564844 H0Y9P7 68 aa12.89□□□□□ -0.35
MAP1LC3B-206ENST00000564844 TLX1NBP0CAT3 122 aa12.89□□□□□ -0.35
MAP1LC3B-206ENST00000564844 UBE2AP49459 152 aa12.89□□□□□ -0.35
MAP1LC3B-206ENST00000564844 CHTF8P0CG12 524 aa12.87□□□□□ -0.35
MAP1LC3B-206ENST00000564844 RBM12B-AS1Q9P1G2 102 aa12.87□□□□□ -0.35
MAP1LC3B-206ENST00000564844 CASC2Q6XLA1 102 aa12.87□□□□□ -0.35
MAP1LC3B-206ENST00000564844 A0A1B0GW54 56 aa12.86□□□□□ -0.35
MAP1LC3B-206ENST00000564844 CHKB-CPT1BH3BT56 60 aa12.86□□□□□ -0.35
MAP1LC3B-206ENST00000564844 PLA2G2DQ9UNK4 145 aa12.85□□□□□ -0.35
MAP1LC3B-206ENST00000564844 H0Y9J4 135 aa12.85□□□□□ -0.35
MAP1LC3B-206ENST00000564844 SPTSSBQ8NFR3 76 aa12.85□□□□□ -0.35
MAP1LC3B-206ENST00000564844 KRTAP11-1Q8IUC1 163 aa12.83□□□□□ -0.36
MAP1LC3B-206ENST00000564844 PRR15LQ9BU68 103 aa12.83□□□□□ -0.36
MAP1LC3B-206ENST00000564844 PCOTHQ58A44 107 aa12.82□□□□□ -0.36
MAP1LC3B-206ENST00000564844 CYP4F30PQ9H0H9 118 aa12.82□□□□□ -0.36
MAP1LC3B-206ENST00000564844 IGLV5-37A0A075B6J1 123 aa12.82□□□□□ -0.36
MAP1LC3B-206ENST00000564844 PHF5AQ7RTV0 110 aaKnown RBP12.82□□□□□ -0.36
MAP1LC3B-206ENST00000564844 NDUFB1O75438 58 aa12.8□□□□□ -0.36
MAP1LC3B-206ENST00000564844 Q5VV11 94 aa12.8□□□□□ -0.36
MAP1LC3B-206ENST00000564844 CNBPP62633 177 aaKnown RBP12.79□□□□□ -0.36
MAP1LC3B-206ENST00000564844 KRTAP24-1Q3LI83 254 aa12.78□□□□□ -0.36
MAP1LC3B-206ENST00000564844 KRTAP29-1A8MX34 341 aaPredicted RBP12.75□□□□□ -0.37
MAP1LC3B-206ENST00000564844 Q8N9P0 234 aaPredicted RBP12.74□□□□□ -0.37
MAP1LC3B-206ENST00000564844 H3BS24 57 aa12.73□□□□□ -0.37
MAP1LC3B-206ENST00000564844 KRTAP1-5Q9BYS1 174 aa12.72□□□□□ -0.37
MAP1LC3B-206ENST00000564844 UBE2DNLQ8IWF7 75 aa12.68□□□□□ -0.38
MAP1LC3B-206ENST00000564844 IGLV9-49A0A0B4J1Y8 123 aa12.68□□□□□ -0.38
MAP1LC3B-206ENST00000564844 A6NED7 52 aa12.68□□□□□ -0.38
MAP1LC3B-206ENST00000564844 C16orf90A8MZG2 172 aa12.68□□□□□ -0.38
MAP1LC3B-206ENST00000564844 NDUFS5O43920 106 aa12.67□□□□□ -0.38
MAP1LC3B-206ENST00000564844 DNAH1Q9P2D7 4330 aa12.66□□□□□ -0.38
MAP1LC3B-206ENST00000564844 KTN1-AS1Q86SY8 53 aa12.66□□□□□ -0.38
MAP1LC3B-206ENST00000564844 A8MWP4 228 aa12.66□□□□□ -0.38
MAP1LC3B-206ENST00000564844 COA5Q86WW8 74 aa12.65□□□□□ -0.38
MAP1LC3B-206ENST00000564844 SPAG11AQ6PDA7 123 aa12.65□□□□□ -0.38
MAP1LC3B-206ENST00000564844 DNAH9Q9NYC9 4486 aa12.65□□□□□ -0.38
MAP1LC3B-206ENST00000564844 CMYA5Q8N3K9 4069 aa12.64□□□□□ -0.39
MAP1LC3B-206ENST00000564844 LINC00472Q9H8W2 130 aa12.64□□□□□ -0.39
MAP1LC3B-206ENST00000564844 LCA10Q71F78 164 aa12.6□□□□□ -0.39
MAP1LC3B-206ENST00000564844 IGLV8-61A0A075B6I0 122 aa12.59□□□□□ -0.39
MAP1LC3B-206ENST00000564844 C9orf163Q8N9P6 203 aa12.58□□□□□ -0.4
MAP1LC3B-206ENST00000564844 MMP24-AS1A0A0U1RRL7 71 aa12.58□□□□□ -0.4
MAP1LC3B-206ENST00000564844 LIMD2Q9BT23 127 aa12.58□□□□□ -0.4
MAP1LC3B-206ENST00000564844 PANO1I0J062 215 aa12.56□□□□□ -0.4
MAP1LC3B-206ENST00000564844 IGHV6-1A0A0B4J1U7 121 aa12.56□□□□□ -0.4
MAP1LC3B-206ENST00000564844 SPANXA2-OT1Q8N9U9 137 aa12.56□□□□□ -0.4
MAP1LC3B-206ENST00000564844 ANAPC11Q9NYG5 84 aa12.56□□□□□ -0.4
MAP1LC3B-206ENST00000564844 HUWE1Q7Z6Z7 4374 aaKnown RBP12.55□□□□□ -0.4
MAP1LC3B-206ENST00000564844 DNAH7Q8WXX0 4024 aa12.54□□□□□ -0.4
MAP1LC3B-206ENST00000564844 TGP01266 2768 aa12.52□□□□□ -0.4
MAP1LC3B-206ENST00000564844 K7EIL1 84 aa12.52□□□□□ -0.41
MAP1LC3B-206ENST00000564844 C8orf87E5RJ46 101 aa12.51□□□□□ -0.41
MAP1LC3B-206ENST00000564844 IGLV7-46A0A075B6I9 117 aa12.47□□□□□ -0.41
MAP1LC3B-206ENST00000564844 H3BPC8 53 aa12.47□□□□□ -0.41
MAP1LC3B-206ENST00000564844 A0A087X002 238 aa12.46□□□□□ -0.41
MAP1LC3B-206ENST00000564844 NOTCH2NLQ7Z3S9 236 aa12.46□□□□□ -0.41
MAP1LC3B-206ENST00000564844 SPINK6Q6UWN8 80 aa12.44□□□□□ -0.42
MAP1LC3B-206ENST00000564844 MOBPQ13875 183 aa12.42□□□□□ -0.42
MAP1LC3B-206ENST00000564844 SPINK7P58062 85 aa12.42□□□□□ -0.42
MAP1LC3B-206ENST00000564844 FRAS1Q86XX4 4008 aa12.41□□□□□ -0.42
MAP1LC3B-206ENST00000564844 LOC101927531A0A1B0GV80 90 aa12.4□□□□□ -0.42
MAP1LC3B-206ENST00000564844 Q75L30 129 aa12.4□□□□□ -0.42
MAP1LC3B-206ENST00000564844 C8orf17Q9NRJ1 99 aa12.4□□□□□ -0.42
MAP1LC3B-206ENST00000564844 PRR26Q8N8Z3 221 aa12.4□□□□□ -0.42
MAP1LC3B-206ENST00000564844 Q96NJ1 140 aa12.39□□□□□ -0.43
MAP1LC3B-206ENST00000564844 SPRR1BP22528 89 aa12.39□□□□□ -0.43
MAP1LC3B-206ENST00000564844 HRES1P13985 223 aa12.38□□□□□ -0.43
MAP1LC3B-206ENST00000564844 CDK2AP2O75956 126 aa12.36□□□□□ -0.43
MAP1LC3B-206ENST00000564844 ATP11AUNQ6ZP68 121 aa12.35□□□□□ -0.43
MAP1LC3B-206ENST00000564844 DNAH3Q8TD57 4116 aa12.35□□□□□ -0.43
MAP1LC3B-206ENST00000564844 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.35□□□□□ -0.43
MAP1LC3B-206ENST00000564844 RETNLBQ9BQ08 111 aa12.33□□□□□ -0.44
MAP1LC3B-206ENST00000564844 CDC42SE1Q9NRR8 79 aa12.3□□□□□ -0.44
MAP1LC3B-206ENST00000564844 MDFIQ99750 246 aa12.29□□□□□ -0.44
MAP1LC3B-206ENST00000564844 A0A1B0GVX0 72 aa12.28□□□□□ -0.44
MAP1LC3B-206ENST00000564844 A6NN06 94 aa12.28□□□□□ -0.44
MAP1LC3B-206ENST00000564844 FBN3Q75N90 2809 aa12.28□□□□□ -0.44
MAP1LC3B-206ENST00000564844 TP53AIP1Q9HCN2 124 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms