RNA–Protein interactions for RNA: ENST00000562710.1

LINC00565-201, long intergenic non-protein coding RNA 565, humanhuman

BASIC

Gene LINC00565, Length 2,331 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00565-201ENST00000562710 DEFB116Q30KQ4 102 aa13.63□□□□□ -0.23
LINC00565-201ENST00000562710 A0A087WSZ3 146 aa13.63□□□□□ -0.23
LINC00565-201ENST00000562710 LYSTQ99698 3801 aa13.61□□□□□ -0.23
LINC00565-201ENST00000562710 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.6□□□□□ -0.23
LINC00565-201ENST00000562710 UBE2AP49459 152 aa13.59□□□□□ -0.23
LINC00565-201ENST00000562710 KRTAP11-1Q8IUC1 163 aa13.58□□□□□ -0.24
LINC00565-201ENST00000562710 PHF5AQ7RTV0 110 aaKnown RBP13.57□□□□□ -0.24
LINC00565-201ENST00000562710 MPLKIPQ8TAP9 179 aa13.56□□□□□ -0.24
LINC00565-201ENST00000562710 CHTF8P0CG12 524 aa13.56□□□□□ -0.24
LINC00565-201ENST00000562710 WFDC13Q8IUB5 93 aa13.55□□□□□ -0.24
LINC00565-201ENST00000562710 PRO0628Q9UI54 55 aa13.55□□□□□ -0.24
LINC00565-201ENST00000562710 UBE2DNLQ8IWF7 75 aa13.55□□□□□ -0.24
LINC00565-201ENST00000562710 C14orf177Q52M58 125 aa13.54□□□□□ -0.24
LINC00565-201ENST00000562710 DNAH9Q9NYC9 4486 aa13.54□□□□□ -0.24
LINC00565-201ENST00000562710 hDV103S1A0JD37 113 aa13.53□□□□□ -0.24
LINC00565-201ENST00000562710 H0Y9J4 135 aa13.53□□□□□ -0.24
LINC00565-201ENST00000562710 STAB2Q8WWQ8 2551 aa13.53□□□□□ -0.24
LINC00565-201ENST00000562710 SPRR1BP22528 89 aa13.52□□□□□ -0.24
LINC00565-201ENST00000562710 RPL37AP61513 92 aaKnown RBP13.52□□□□□ -0.24
LINC00565-201ENST00000562710 SRRM2Q9UQ35 2752 aaKnown RBP13.51□□□□□ -0.25
LINC00565-201ENST00000562710 APLNQ9ULZ1 77 aa13.5□□□□□ -0.25
LINC00565-201ENST00000562710 C1orf64Q8NEQ6 169 aa13.49□□□□□ -0.25
LINC00565-201ENST00000562710 COL7A1Q02388 2944 aa13.49□□□□□ -0.25
LINC00565-201ENST00000562710 KRTAP29-1A8MX34 341 aaPredicted RBP13.48□□□□□ -0.25
LINC00565-201ENST00000562710 MGAM2Q2M2H8 2515 aa13.47□□□□□ -0.25
LINC00565-201ENST00000562710 C9orf163Q8N9P6 203 aa13.46□□□□□ -0.26
LINC00565-201ENST00000562710 MP68P56378 58 aa13.45□□□□□ -0.26
LINC00565-201ENST00000562710 NDUFB1O75438 58 aa13.44□□□□□ -0.26
LINC00565-201ENST00000562710 PRR15Q8IV56 129 aa13.44□□□□□ -0.26
LINC00565-201ENST00000562710 CYP4F30PQ9H0H9 118 aa13.44□□□□□ -0.26
LINC00565-201ENST00000562710 LINC00472Q9H8W2 130 aa13.43□□□□□ -0.26
LINC00565-201ENST00000562710 CASC2Q6XLA1 102 aa13.42□□□□□ -0.26
LINC00565-201ENST00000562710 B9D2Q9BPU9 175 aa13.41□□□□□ -0.26
LINC00565-201ENST00000562710 LRCOL1A6NCL2 159 aa13.41□□□□□ -0.26
LINC00565-201ENST00000562710 A8MWP4 228 aa13.41□□□□□ -0.26
LINC00565-201ENST00000562710 TRAV22A0A0B4J277 110 aa13.4□□□□□ -0.26
LINC00565-201ENST00000562710 PRR4Q16378 134 aa13.4□□□□□ -0.26
LINC00565-201ENST00000562710 BRK1Q8WUW1 75 aa13.39□□□□□ -0.27
LINC00565-201ENST00000562710 LINC00208Q96KT6 92 aa13.39□□□□□ -0.27
LINC00565-201ENST00000562710 PKIGQ9Y2B9 76 aa13.38□□□□□ -0.27
LINC00565-201ENST00000562710 DNAH7Q8WXX0 4024 aa13.37□□□□□ -0.27
LINC00565-201ENST00000562710 TENM2Q9NT68 2774 aa13.37□□□□□ -0.27
LINC00565-201ENST00000562710 CSMD3Q7Z407 3707 aa13.36□□□□□ -0.27
LINC00565-201ENST00000562710 PANO1I0J062 215 aa13.35□□□□□ -0.27
LINC00565-201ENST00000562710 KRTAP13-1Q8IUC0 172 aa13.35□□□□□ -0.27
LINC00565-201ENST00000562710 H0Y9P7 68 aa13.34□□□□□ -0.27
LINC00565-201ENST00000562710 Q1T7F1 81 aa13.34□□□□□ -0.27
LINC00565-201ENST00000562710 DYNC2H1Q8NCM8 4307 aaKnown RBP13.34□□□□□ -0.27
LINC00565-201ENST00000562710 NBDYA0A0U1RRE5 68 aa13.33□□□□□ -0.28
LINC00565-201ENST00000562710 H3BPC8 53 aa13.32□□□□□ -0.28
LINC00565-201ENST00000562710 Q6ZRN7 208 aaPredicted RBP13.29□□□□□ -0.28
LINC00565-201ENST00000562710 MMP24-AS1A0A0U1RRL7 71 aa13.26□□□□□ -0.29
LINC00565-201ENST00000562710 SPANXA2-OT1Q8N9U9 137 aa13.26□□□□□ -0.29
LINC00565-201ENST00000562710 MDFIQ99750 246 aa13.24□□□□□ -0.29
LINC00565-201ENST00000562710 PLECQ15149 4684 aaKnown RBP13.24□□□□□ -0.29
LINC00565-201ENST00000562710 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.23□□□□□ -0.29
LINC00565-201ENST00000562710 IGLV9-49A0A0B4J1Y8 123 aa13.23□□□□□ -0.29
LINC00565-201ENST00000562710 SPACA4Q8TDM5 124 aa13.23□□□□□ -0.29
LINC00565-201ENST00000562710 Q96NJ1 140 aa13.21□□□□□ -0.3
LINC00565-201ENST00000562710 NUPR2A6NF83 97 aa13.18□□□□□ -0.3
LINC00565-201ENST00000562710 PSPHP1O15172 72 aa13.17□□□□□ -0.3
LINC00565-201ENST00000562710 LINC00483Q53H64 154 aa13.17□□□□□ -0.3
LINC00565-201ENST00000562710 ASB16-AS1Q495Z4 193 aa13.14□□□□□ -0.31
LINC00565-201ENST00000562710 V9GYY9 64 aa13.13□□□□□ -0.31
LINC00565-201ENST00000562710 MOBPQ13875 183 aa13.12□□□□□ -0.31
LINC00565-201ENST00000562710 A0A087WTM6 91 aa13.1□□□□□ -0.31
LINC00565-201ENST00000562710 TP53AIP1Q9HCN2 124 aa13.1□□□□□ -0.31
LINC00565-201ENST00000562710 C8orf17Q9NRJ1 99 aa13.09□□□□□ -0.31
LINC00565-201ENST00000562710 ZNF706Q9Y5V0 76 aaPredicted RBP13.09□□□□□ -0.31
LINC00565-201ENST00000562710 WWC2-AS2Q96NR7 200 aa13.08□□□□□ -0.31
LINC00565-201ENST00000562710 A8MUN3 132 aa13.07□□□□□ -0.32
LINC00565-201ENST00000562710 PSORS1C2Q9UIG4 136 aa13.07□□□□□ -0.32
LINC00565-201ENST00000562710 IGLV7-46A0A075B6I9 117 aa13.06□□□□□ -0.32
LINC00565-201ENST00000562710 IGLV5-52A0A0A0MRZ9 124 aa13.05□□□□□ -0.32
LINC00565-201ENST00000562710 HECTD4Q9Y4D8 3996 aa13.05□□□□□ -0.32
LINC00565-201ENST00000562710 A0A1B0GVX0 72 aa13.04□□□□□ -0.32
LINC00565-201ENST00000562710 IGHV6-1A0A0B4J1U7 121 aa13.03□□□□□ -0.32
LINC00565-201ENST00000562710 RTL8CO15255 209 aa13.03□□□□□ -0.32
LINC00565-201ENST00000562710 C1orf195Q5TG92 126 aa13.03□□□□□ -0.32
LINC00565-201ENST00000562710 Q8N9P0 234 aaPredicted RBP13.03□□□□□ -0.32
LINC00565-201ENST00000562710 VPS13DQ5THJ4 4388 aa13.02□□□□□ -0.32
LINC00565-201ENST00000562710 STARD9Q9P2P6 4700 aa13.02□□□□□ -0.33
LINC00565-201ENST00000562710 Q6ZR54 194 aa13.02□□□□□ -0.33
LINC00565-201ENST00000562710 ANAPC11Q9NYG5 84 aa13.01□□□□□ -0.33
LINC00565-201ENST00000562710 PCOTHQ58A44 107 aa13□□□□□ -0.33
LINC00565-201ENST00000562710 ZNF861PO60384 105 aa13□□□□□ -0.33
LINC00565-201ENST00000562710 Q5VV11 94 aa13□□□□□ -0.33
LINC00565-201ENST00000562710 CDK2AP2O75956 126 aa12.99□□□□□ -0.33
LINC00565-201ENST00000562710 COA5Q86WW8 74 aa12.99□□□□□ -0.33
LINC00565-201ENST00000562710 LIMD2Q9BT23 127 aa12.99□□□□□ -0.33
LINC00565-201ENST00000562710 PLAC8Q9NZF1 115 aa12.99□□□□□ -0.33
LINC00565-201ENST00000562710 NDUFS5O43920 106 aa12.98□□□□□ -0.33
LINC00565-201ENST00000562710 CD164Q04900 197 aa12.97□□□□□ -0.33
LINC00565-201ENST00000562710 FRAS1Q86XX4 4008 aa12.95□□□□□ -0.34
LINC00565-201ENST00000562710 MRPL34Q9BQ48 92 aaKnown RBP12.95□□□□□ -0.34
LINC00565-201ENST00000562710 DNAH8Q96JB1 4490 aa12.93□□□□□ -0.34
LINC00565-201ENST00000562710 A0A087X002 238 aa12.92□□□□□ -0.34
LINC00565-201ENST00000562710 NOTCH2NLQ7Z3S9 236 aa12.92□□□□□ -0.34
LINC00565-201ENST00000562710 PRKDCP78527 4128 aaKnown RBP12.9□□□□□ -0.34
LINC00565-201ENST00000562710 PRR15LQ9BU68 103 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms