RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 HIST3H2BBQ8N257 126 aa6.07□□□□□ -1.44
GABPB1-210ENST00000560825 SMIM11BQ8TCY0 68 aa6.07□□□□□ -1.44
GABPB1-210ENST00000560825 LAMTOR3Q9UHA4 124 aa6.07□□□□□ -1.44
GABPB1-210ENST00000560825 PCOTHQ58A44 107 aa6.06□□□□□ -1.44
GABPB1-210ENST00000560825 HIST1H2BLQ99880 126 aa6.06□□□□□ -1.44
GABPB1-210ENST00000560825 TRBV7-6A0A0J9YX20 115 aa6.05□□□□□ -1.44
GABPB1-210ENST00000560825 TEX49A0A1B0GTD5 131 aa6.05□□□□□ -1.44
GABPB1-210ENST00000560825 IFITM1P13164 125 aa6.04□□□□□ -1.44
GABPB1-210ENST00000560825 C1orf195Q5TG92 126 aa6.04□□□□□ -1.44
GABPB1-210ENST00000560825 A0A1B0GWB2 263 aa6.03□□□□□ -1.44
GABPB1-210ENST00000560825 C20orf202A1L168 122 aa6.03□□□□□ -1.44
GABPB1-210ENST00000560825 CBY1Q9Y3M2 126 aa6.03□□□□□ -1.44
GABPB1-210ENST00000560825 PRO1933Q9H354 126 aa6.02□□□□□ -1.45
GABPB1-210ENST00000560825 SLC25A34Q6PIV7 304 aa6.01□□□□□ -1.45
GABPB1-210ENST00000560825 LIMD2Q9BT23 127 aa6.01□□□□□ -1.45
GABPB1-210ENST00000560825 A4D1N5 150 aa6□□□□□ -1.45
GABPB1-210ENST00000560825 MT1HP80294 61 aa6□□□□□ -1.45
GABPB1-210ENST00000560825 CD164Q04900 197 aa6□□□□□ -1.45
GABPB1-210ENST00000560825 Q6ZVH6 145 aa6□□□□□ -1.45
GABPB1-210ENST00000560825 C12orf57Q99622 126 aa6□□□□□ -1.45
GABPB1-210ENST00000560825 FLGP20930 4061 aaPredicted RBP6□□□□□ -1.45
GABPB1-210ENST00000560825 IGLV8-61A0A075B6I0 122 aa5.99□□□□□ -1.45
GABPB1-210ENST00000560825 AKR1D1P51857 326 aa5.99□□□□□ -1.45
GABPB1-210ENST00000560825 TRAV13-2A0A0B4J235 113 aa5.98□□□□□ -1.45
GABPB1-210ENST00000560825 Q5XG85 94 aa5.98□□□□□ -1.45
GABPB1-210ENST00000560825 LINC00575Q6W349 94 aa5.98□□□□□ -1.45
GABPB1-210ENST00000560825 Q6ZQY7 126 aa5.97□□□□□ -1.45
GABPB1-210ENST00000560825 FSIP2Q5CZC0 6907 aa5.96□□□□□ -1.46
GABPB1-210ENST00000560825 SNRPEP62304 92 aaKnown RBP5.96□□□□□ -1.46
GABPB1-210ENST00000560825 COPS9Q8WXC6 57 aa5.95□□□□□ -1.46
GABPB1-210ENST00000560825 S100A2P29034 98 aa5.94□□□□□ -1.46
GABPB1-210ENST00000560825 IGFL1Q6UW32 110 aa5.94□□□□□ -1.46
GABPB1-210ENST00000560825 hADV29S1A0JD25 119 aa5.92□□□□□ -1.46
GABPB1-210ENST00000560825 RPL37P61927 97 aaKnown RBP5.92□□□□□ -1.46
GABPB1-210ENST00000560825 SCGB1D1O95968 90 aa5.91□□□□□ -1.46
GABPB1-210ENST00000560825 H3BUT2 72 aa5.91□□□□□ -1.46
GABPB1-210ENST00000560825 COX8AP10176 69 aa5.91□□□□□ -1.46
GABPB1-210ENST00000560825 C14orf144Q96I85 54 aa5.91□□□□□ -1.46
GABPB1-210ENST00000560825 FAM218AQ96MZ4 157 aa5.91□□□□□ -1.46
GABPB1-210ENST00000560825 NHP2Q9NX24 153 aaKnown RBP5.91□□□□□ -1.46
GABPB1-210ENST00000560825 HSBP1L1C9JCN9 74 aa5.9□□□□□ -1.47
GABPB1-210ENST00000560825 CFC1BP0CG36 223 aa5.9□□□□□ -1.47
GABPB1-210ENST00000560825 CFC1P0CG37 223 aa5.9□□□□□ -1.47
GABPB1-210ENST00000560825 HIST1H4GQ99525 98 aa5.9□□□□□ -1.47
GABPB1-210ENST00000560825 TRBV7-7A0A0K0K1E9 115 aa5.89□□□□□ -1.47
GABPB1-210ENST00000560825 S100A6P06703 90 aa5.89□□□□□ -1.47
GABPB1-210ENST00000560825 C2orf91Q6ZV80 131 aa5.89□□□□□ -1.47
GABPB1-210ENST00000560825 KRTAP10-6P60371 365 aaPredicted RBP5.88□□□□□ -1.47
GABPB1-210ENST00000560825 VAMP3Q15836 100 aa5.88□□□□□ -1.47
GABPB1-210ENST00000560825 OCIAD2Q56VL3 154 aa5.88□□□□□ -1.47
GABPB1-210ENST00000560825 CLEC2BQ92478 149 aa5.88□□□□□ -1.47
GABPB1-210ENST00000560825 F8WEM9 126 aa5.87□□□□□ -1.47
GABPB1-210ENST00000560825 S100A1P23297 94 aa5.87□□□□□ -1.47
GABPB1-210ENST00000560825 PAM16Q9Y3D7 125 aa5.86□□□□□ -1.47
GABPB1-210ENST00000560825 TCL1BO95988 128 aa5.85□□□□□ -1.47
GABPB1-210ENST00000560825 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.85□□□□□ -1.47
GABPB1-210ENST00000560825 OBSCN-AS1Q96MR7 158 aa5.85□□□□□ -1.47
GABPB1-210ENST00000560825 DLEU1O43261 78 aa5.84□□□□□ -1.47
GABPB1-210ENST00000560825 Q6JHZ5 121 aa5.84□□□□□ -1.47
GABPB1-210ENST00000560825 CRCT1Q9UGL9 99 aa5.84□□□□□ -1.47
GABPB1-210ENST00000560825 SPATA45Q537H7 98 aa5.83□□□□□ -1.48
GABPB1-210ENST00000560825 BVES-AS1Q5T3Y7 98 aa5.82□□□□□ -1.48
GABPB1-210ENST00000560825 FXYD2P54710 66 aa5.82□□□□□ -1.48
GABPB1-210ENST00000560825 Q96NJ1 140 aa5.82□□□□□ -1.48
GABPB1-210ENST00000560825 SNHG12Q9BXW3 62 aa5.82□□□□□ -1.48
GABPB1-210ENST00000560825 HIGD1BQ9P298 99 aa5.81□□□□□ -1.48
GABPB1-210ENST00000560825 A0A0B4J2C4 111 aa5.8□□□□□ -1.48
GABPB1-210ENST00000560825 RAB37Q96AX2 223 aa5.8□□□□□ -1.48
GABPB1-210ENST00000560825 NDUFV3P56181 108 aaKnown RBP5.79□□□□□ -1.48
GABPB1-210ENST00000560825 CEND1Q8N111 149 aa5.78□□□□□ -1.48
GABPB1-210ENST00000560825 PPDPFLQ8WWR9 84 aa5.78□□□□□ -1.48
GABPB1-210ENST00000560825 A0A1B0GV72 72 aa5.77□□□□□ -1.49
GABPB1-210ENST00000560825 A0A1W2PNM2 257 aa5.77□□□□□ -1.49
GABPB1-210ENST00000560825 KRTAP16-1A8MUX0 517 aa5.77□□□□□ -1.49
GABPB1-210ENST00000560825 LST1O00453 97 aa5.77□□□□□ -1.49
GABPB1-210ENST00000560825 TRIAP1O43715 76 aa5.77□□□□□ -1.49
GABPB1-210ENST00000560825 COX6B2Q6YFQ2 88 aa5.77□□□□□ -1.49
GABPB1-210ENST00000560825 Q75L30 129 aa5.77□□□□□ -1.49
GABPB1-210ENST00000560825 VAMP8Q9BV40 100 aa5.77□□□□□ -1.49
GABPB1-210ENST00000560825 A0A087WSZ3 146 aa5.76□□□□□ -1.49
GABPB1-210ENST00000560825 K7ERJ3 54 aa5.76□□□□□ -1.49
GABPB1-210ENST00000560825 M0R2T5 61 aa5.76□□□□□ -1.49
GABPB1-210ENST00000560825 Q6Q795 121 aa5.76□□□□□ -1.49
GABPB1-210ENST00000560825 H3BMG7 143 aa5.74□□□□□ -1.49
GABPB1-210ENST00000560825 DSCR10P59022 87 aa5.74□□□□□ -1.49
GABPB1-210ENST00000560825 PYY3Q5JQD4 70 aa5.74□□□□□ -1.49
GABPB1-210ENST00000560825 PRO1854Q9UHT4 67 aa5.74□□□□□ -1.49
GABPB1-210ENST00000560825 H0YGX0 51 aa5.74□□□□□ -1.49
GABPB1-210ENST00000560825 NOTCH2NLQ7Z3S9 236 aa5.74□□□□□ -1.49
GABPB1-210ENST00000560825 TEN1Q86WV5 123 aa5.74□□□□□ -1.49
GABPB1-210ENST00000560825 C20orf166-AS1Q96NR2 134 aa5.74□□□□□ -1.49
GABPB1-210ENST00000560825 A8MUU9 505 aa5.73□□□□□ -1.49
GABPB1-210ENST00000560825 FABP2P12104 132 aa5.73□□□□□ -1.49
GABPB1-210ENST00000560825 ATP11AUNQ6ZP68 121 aa5.73□□□□□ -1.49
GABPB1-210ENST00000560825 DEFB116Q30KQ4 102 aa5.71□□□□□ -1.5
GABPB1-210ENST00000560825 SS18L2Q9UHA2 77 aa5.68□□□□□ -1.5
GABPB1-210ENST00000560825 USH2AO75445 5202 aa5.67□□□□□ -1.5
GABPB1-210ENST00000560825 A0A1B0GX51 115 aa5.67□□□□□ -1.5
GABPB1-210ENST00000560825 SIGMAR1Q99720 223 aa5.66□□□□□ -1.5
GABPB1-210ENST00000560825 SSPOA2VEC9 5147 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms