RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 CD164Q04900 197 aa4.56□□□□□ -1.68
SNX1-207ENST00000559401 HIGD1BQ9P298 99 aa4.56□□□□□ -1.68
SNX1-207ENST00000559401 TMEM238LA0A1B0GVL6 79 aa4.54□□□□□ -1.68
SNX1-207ENST00000559401 C9orf92A6NGG3 77 aa4.54□□□□□ -1.68
SNX1-207ENST00000559401 A6NJY4 79 aa4.54□□□□□ -1.68
SNX1-207ENST00000559401 CFC1BP0CG36 223 aa4.54□□□□□ -1.68
SNX1-207ENST00000559401 CFC1P0CG37 223 aa4.54□□□□□ -1.68
SNX1-207ENST00000559401 SEC61BP60468 96 aaKnown RBP4.54□□□□□ -1.68
SNX1-207ENST00000559401 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.54□□□□□ -1.68
SNX1-207ENST00000559401 C2orf91Q6ZV80 131 aa4.54□□□□□ -1.68
SNX1-207ENST00000559401 A0A0B4J2C4 111 aa4.53□□□□□ -1.68
SNX1-207ENST00000559401 SNCGO76070 127 aa4.53□□□□□ -1.68
SNX1-207ENST00000559401 ASB16-AS1Q495Z4 193 aa4.53□□□□□ -1.68
SNX1-207ENST00000559401 XP32Q5T750 250 aa4.53□□□□□ -1.68
SNX1-207ENST00000559401 CEND1Q8N111 149 aa4.53□□□□□ -1.68
SNX1-207ENST00000559401 SNHG12Q9BXW3 62 aa4.53□□□□□ -1.68
SNX1-207ENST00000559401 MUC2Q02817 5179 aa4.53□□□□□ -1.68
SNX1-207ENST00000559401 TCL1BO95988 128 aa4.52□□□□□ -1.69
SNX1-207ENST00000559401 Q6JHZ5 121 aa4.52□□□□□ -1.69
SNX1-207ENST00000559401 CLEC2BQ92478 149 aa4.52□□□□□ -1.69
SNX1-207ENST00000559401 H0YGX0 51 aa4.51□□□□□ -1.69
SNX1-207ENST00000559401 OCIAD2Q56VL3 154 aa4.51□□□□□ -1.69
SNX1-207ENST00000559401 C1orf195Q5TG92 126 aa4.51□□□□□ -1.69
SNX1-207ENST00000559401 PPDPFLQ8WWR9 84 aa4.51□□□□□ -1.69
SNX1-207ENST00000559401 PRO1854Q9UHT4 67 aa4.51□□□□□ -1.69
SNX1-207ENST00000559401 M0R143 59 aa4.5□□□□□ -1.69
SNX1-207ENST00000559401 FXYD2P54710 66 aa4.5□□□□□ -1.69
SNX1-207ENST00000559401 Q5XG85 94 aa4.5□□□□□ -1.69
SNX1-207ENST00000559401 IGFL1Q6UW32 110 aa4.5□□□□□ -1.69
SNX1-207ENST00000559401 MUC17Q685J3 4493 aa4.49□□□□□ -1.69
SNX1-207ENST00000559401 H3BUT2 72 aa4.49□□□□□ -1.69
SNX1-207ENST00000559401 HSD52Q0P140 79 aa4.49□□□□□ -1.69
SNX1-207ENST00000559401 IGLV8-61A0A075B6I0 122 aa4.48□□□□□ -1.69
SNX1-207ENST00000559401 TRBV7-7A0A0K0K1E9 115 aa4.48□□□□□ -1.69
SNX1-207ENST00000559401 PSMB2P49721 201 aa4.48□□□□□ -1.69
SNX1-207ENST00000559401 FAM218AQ96MZ4 157 aa4.48□□□□□ -1.69
SNX1-207ENST00000559401 K7ERJ3 54 aa4.47□□□□□ -1.69
SNX1-207ENST00000559401 TRIAP1O43715 76 aa4.47□□□□□ -1.69
SNX1-207ENST00000559401 FABP2P12104 132 aa4.47□□□□□ -1.69
SNX1-207ENST00000559401 A0A1B0GX51 115 aa4.46□□□□□ -1.7
SNX1-207ENST00000559401 DNAL4O96015 105 aa4.46□□□□□ -1.7
SNX1-207ENST00000559401 GHRHP01286 108 aa4.46□□□□□ -1.7
SNX1-207ENST00000559401 NDUFV3P56181 108 aaKnown RBP4.46□□□□□ -1.7
SNX1-207ENST00000559401 BATFQ16520 125 aa4.46□□□□□ -1.7
SNX1-207ENST00000559401 PCOTHQ58A44 107 aa4.46□□□□□ -1.7
SNX1-207ENST00000559401 KRTAP4-1Q9BYQ7 146 aa4.46□□□□□ -1.7
SNX1-207ENST00000559401 COL5A1-AS1Q5SY13 56 aa4.45□□□□□ -1.7
SNX1-207ENST00000559401 A0A1B0GV72 72 aa4.44□□□□□ -1.7
SNX1-207ENST00000559401 H3BMG7 143 aa4.44□□□□□ -1.7
SNX1-207ENST00000559401 LST1O00453 97 aa4.44□□□□□ -1.7
SNX1-207ENST00000559401 COX6CP09669 75 aa4.44□□□□□ -1.7
SNX1-207ENST00000559401 SS18L2Q9UHA2 77 aa4.44□□□□□ -1.7
SNX1-207ENST00000559401 LCE2AQ5TA79 106 aaPredicted RBP4.43□□□□□ -1.7
SNX1-207ENST00000559401 TEN1Q86WV5 123 aa4.42□□□□□ -1.7
SNX1-207ENST00000559401 ORMDL1Q9P0S3 153 aa4.42□□□□□ -1.7
SNX1-207ENST00000559401 FAT4Q6V0I7 4981 aa4.42□□□□□ -1.7
SNX1-207ENST00000559401 A0A087WSZ3 146 aa4.41□□□□□ -1.7
SNX1-207ENST00000559401 SCGB1C2P0DMR2 95 aa4.41□□□□□ -1.7
SNX1-207ENST00000559401 RPL37P61927 97 aaKnown RBP4.41□□□□□ -1.7
SNX1-207ENST00000559401 Q6Q795 121 aa4.4□□□□□ -1.71
SNX1-207ENST00000559401 ANKRD29Q8N6D5 301 aa4.4□□□□□ -1.71
SNX1-207ENST00000559401 OBSCN-AS1Q96MR7 158 aa4.4□□□□□ -1.71
SNX1-207ENST00000559401 H3BQ85 93 aa4.39□□□□□ -1.71
SNX1-207ENST00000559401 TMEM256-PLSCR3K7ERE1 68 aa4.38□□□□□ -1.71
SNX1-207ENST00000559401 TAX1BP3O14907 124 aa4.38□□□□□ -1.71
SNX1-207ENST00000559401 SIGMAR1Q99720 223 aa4.38□□□□□ -1.71
SNX1-207ENST00000559401 A0A1W2PNM2 257 aa4.37□□□□□ -1.71
SNX1-207ENST00000559401 C9orf118A6NHY6 69 aa4.37□□□□□ -1.71
SNX1-207ENST00000559401 Q96NJ1 140 aa4.37□□□□□ -1.71
SNX1-207ENST00000559401 TRACP01848 142 aa4.36□□□□□ -1.71
SNX1-207ENST00000559401 ATP11AUNQ6ZP68 121 aa4.36□□□□□ -1.71
SNX1-207ENST00000559401 VPS25Q9BRG1 176 aa4.36□□□□□ -1.71
SNX1-207ENST00000559401 TRBV7-4A0A0J9YYF1 115 aa4.35□□□□□ -1.71
SNX1-207ENST00000559401 A0A1B0GV90 55 aa4.35□□□□□ -1.71
SNX1-207ENST00000559401 CCKP06307 115 aa4.35□□□□□ -1.71
SNX1-207ENST00000559401 UBE2V1Q13404 147 aa4.35□□□□□ -1.71
SNX1-207ENST00000559401 IGKV4-1P06312 121 aa4.34□□□□□ -1.71
SNX1-207ENST00000559401 COX6B2Q6YFQ2 88 aa4.34□□□□□ -1.71
SNX1-207ENST00000559401 Q75L30 129 aa4.34□□□□□ -1.71
SNX1-207ENST00000559401 NAA38Q9BRA0 125 aaKnown RBP4.34□□□□□ -1.71
SNX1-207ENST00000559401 A0A1W2PPM0 123 aa4.33□□□□□ -1.72
SNX1-207ENST00000559401 DSCR10P59022 87 aa4.33□□□□□ -1.72
SNX1-207ENST00000559401 RBM3P98179 157 aaKnown RBP4.33□□□□□ -1.72
SNX1-207ENST00000559401 DSCR8Q96T75 97 aa4.33□□□□□ -1.72
SNX1-207ENST00000559401 KRTAP9-2Q9BYQ4 174 aa4.33□□□□□ -1.72
SNX1-207ENST00000559401 BAALC-AS2P0C853 105 aa4.32□□□□□ -1.72
SNX1-207ENST00000559401 DEFB116Q30KQ4 102 aa4.32□□□□□ -1.72
SNX1-207ENST00000559401 LCE2CQ5TA81 110 aa4.32□□□□□ -1.72
SNX1-207ENST00000559401 LYRM7Q5U5X0 104 aa4.32□□□□□ -1.72
SNX1-207ENST00000559401 ATXN8Q156A1 80 aa4.31□□□□□ -1.72
SNX1-207ENST00000559401 KRTAP19-2Q3LHN2 52 aa4.31□□□□□ -1.72
SNX1-207ENST00000559401 GTF2H5Q6ZYL4 71 aa4.31□□□□□ -1.72
SNX1-207ENST00000559401 C9JAW5 83 aa4.3□□□□□ -1.72
SNX1-207ENST00000559401 C20orf166-AS1Q96NR2 134 aa4.3□□□□□ -1.72
SNX1-207ENST00000559401 TRBV20-1A0A075B6N2 111 aa4.29□□□□□ -1.72
SNX1-207ENST00000559401 IGHV6-1A0A0B4J1U7 121 aa4.29□□□□□ -1.72
SNX1-207ENST00000559401 A8MUU9 505 aa4.29□□□□□ -1.72
SNX1-207ENST00000559401 M0R2T5 61 aa4.29□□□□□ -1.72
SNX1-207ENST00000559401 LINC00313P59037 77 aa4.29□□□□□ -1.72
SNX1-207ENST00000559401 MT1HP80294 61 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms