RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 LIMD2Q9BT23 127 aa6.11□□□□□ -1.43
SPG11-216ENST00000559347 DLEU1O43261 78 aa6.1□□□□□ -1.43
SPG11-216ENST00000559347 HRCT1Q6UXD1 115 aa6.1□□□□□ -1.43
SPG11-216ENST00000559347 HIST1H4GQ99525 98 aa6.1□□□□□ -1.43
SPG11-216ENST00000559347 C12orf57Q99622 126 aa6.1□□□□□ -1.43
SPG11-216ENST00000559347 FAT4Q6V0I7 4981 aa6.09□□□□□ -1.43
SPG11-216ENST00000559347 A0A0U1RQV1 116 aa6.09□□□□□ -1.43
SPG11-216ENST00000559347 PRO1933Q9H354 126 aa6.09□□□□□ -1.43
SPG11-216ENST00000559347 CD164Q04900 197 aa6.08□□□□□ -1.44
SPG11-216ENST00000559347 LINC00575Q6W349 94 aa6.08□□□□□ -1.44
SPG11-216ENST00000559347 PAM16Q9Y3D7 125 aa6.08□□□□□ -1.44
SPG11-216ENST00000559347 VAMP3Q15836 100 aa6.07□□□□□ -1.44
SPG11-216ENST00000559347 SPATA45Q537H7 98 aa6.07□□□□□ -1.44
SPG11-216ENST00000559347 C14orf144Q96I85 54 aa6.07□□□□□ -1.44
SPG11-216ENST00000559347 ASB16-AS1Q495Z4 193 aa6.06□□□□□ -1.44
SPG11-216ENST00000559347 Q6ZQY7 126 aa6.06□□□□□ -1.44
SPG11-216ENST00000559347 C2orf91Q6ZV80 131 aa6.06□□□□□ -1.44
SPG11-216ENST00000559347 VAMP8Q9BV40 100 aa6.06□□□□□ -1.44
SPG11-216ENST00000559347 HIGD1BQ9P298 99 aa6.06□□□□□ -1.44
SPG11-216ENST00000559347 A0A0G2JQZ4 141 aa6.05□□□□□ -1.44
SPG11-216ENST00000559347 hADV29S1A0JD25 119 aa6.05□□□□□ -1.44
SPG11-216ENST00000559347 H7C2G1 150 aa6.05□□□□□ -1.44
SPG11-216ENST00000559347 BVES-AS1Q5T3Y7 98 aa6.04□□□□□ -1.44
SPG11-216ENST00000559347 Q5XG85 94 aa6.04□□□□□ -1.44
SPG11-216ENST00000559347 CFC1BP0CG36 223 aa6.03□□□□□ -1.44
SPG11-216ENST00000559347 CFC1P0CG37 223 aa6.03□□□□□ -1.44
SPG11-216ENST00000559347 A0A0B4J2C4 111 aa6.02□□□□□ -1.45
SPG11-216ENST00000559347 F8WEM9 126 aa6.02□□□□□ -1.45
SPG11-216ENST00000559347 SEC61BP60468 96 aaKnown RBP6.02□□□□□ -1.45
SPG11-216ENST00000559347 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.01□□□□□ -1.45
SPG11-216ENST00000559347 RAB37Q96AX2 223 aa6.01□□□□□ -1.45
SPG11-216ENST00000559347 IGLV8-61A0A075B6I0 122 aa6□□□□□ -1.45
SPG11-216ENST00000559347 PPDPFLQ8WWR9 84 aa6□□□□□ -1.45
SPG11-216ENST00000559347 KRTAP4-1Q9BYQ7 146 aa6□□□□□ -1.45
SPG11-216ENST00000559347 C9orf92A6NGG3 77 aa5.99□□□□□ -1.45
SPG11-216ENST00000559347 PYY3Q5JQD4 70 aa5.99□□□□□ -1.45
SPG11-216ENST00000559347 C1orf195Q5TG92 126 aa5.99□□□□□ -1.45
SPG11-216ENST00000559347 CEND1Q8N111 149 aa5.99□□□□□ -1.45
SPG11-216ENST00000559347 CLEC2BQ92478 149 aa5.99□□□□□ -1.45
SPG11-216ENST00000559347 KRTAP9-9Q9BYP9 154 aa5.99□□□□□ -1.45
SPG11-216ENST00000559347 KRTAP9-4Q9BYQ2 154 aa5.99□□□□□ -1.45
SPG11-216ENST00000559347 Q6JHZ5 121 aa5.98□□□□□ -1.45
SPG11-216ENST00000559347 IGFL1Q6UW32 110 aa5.98□□□□□ -1.45
SPG11-216ENST00000559347 FXYD2P54710 66 aa5.97□□□□□ -1.45
SPG11-216ENST00000559347 FAM218AQ96MZ4 157 aa5.97□□□□□ -1.45
SPG11-216ENST00000559347 PCP4P48539 62 aa5.96□□□□□ -1.46
SPG11-216ENST00000559347 H0YGX0 51 aa5.95□□□□□ -1.46
SPG11-216ENST00000559347 TCL1BO95988 128 aa5.95□□□□□ -1.46
SPG11-216ENST00000559347 OCIAD2Q56VL3 154 aa5.95□□□□□ -1.46
SPG11-216ENST00000559347 PRO1854Q9UHT4 67 aa5.95□□□□□ -1.46
SPG11-216ENST00000559347 TRBV7-7A0A0K0K1E9 115 aa5.94□□□□□ -1.46
SPG11-216ENST00000559347 H3BUT2 72 aa5.93□□□□□ -1.46
SPG11-216ENST00000559347 HSD52Q0P140 79 aa5.93□□□□□ -1.46
SPG11-216ENST00000559347 SNHG12Q9BXW3 62 aa5.93□□□□□ -1.46
SPG11-216ENST00000559347 TRIAP1O43715 76 aa5.92□□□□□ -1.46
SPG11-216ENST00000559347 SNCGO76070 127 aa5.92□□□□□ -1.46
SPG11-216ENST00000559347 A0A1B0GX51 115 aa5.91□□□□□ -1.46
SPG11-216ENST00000559347 PCOTHQ58A44 107 aa5.91□□□□□ -1.46
SPG11-216ENST00000559347 K7ERJ3 54 aa5.9□□□□□ -1.46
SPG11-216ENST00000559347 NDUFV3P56181 108 aaKnown RBP5.9□□□□□ -1.46
SPG11-216ENST00000559347 Q6Q795 121 aa5.89□□□□□ -1.47
SPG11-216ENST00000559347 RPL37P61927 97 aaKnown RBP5.88□□□□□ -1.47
SPG11-216ENST00000559347 UQCR10Q9UDW1 63 aa5.88□□□□□ -1.47
SPG11-216ENST00000559347 TEN1Q86WV5 123 aa5.86□□□□□ -1.47
SPG11-216ENST00000559347 SS18L2Q9UHA2 77 aa5.86□□□□□ -1.47
SPG11-216ENST00000559347 KRTAP4-8A0A0G2JLE6 195 aa5.85□□□□□ -1.47
SPG11-216ENST00000559347 H3BMG7 143 aa5.85□□□□□ -1.47
SPG11-216ENST00000559347 LST1O00453 97 aa5.85□□□□□ -1.47
SPG11-216ENST00000559347 DNAL4O96015 105 aa5.85□□□□□ -1.47
SPG11-216ENST00000559347 FABP2P12104 132 aa5.85□□□□□ -1.47
SPG11-216ENST00000559347 PSMB2P49721 201 aa5.85□□□□□ -1.47
SPG11-216ENST00000559347 KRTAP19-2Q3LHN2 52 aa5.85□□□□□ -1.47
SPG11-216ENST00000559347 ORMDL1Q9P0S3 153 aa5.84□□□□□ -1.47
SPG11-216ENST00000559347 A0A087WSZ3 146 aa5.83□□□□□ -1.48
SPG11-216ENST00000559347 KRTAP19-4Q3LI73 84 aa5.83□□□□□ -1.48
SPG11-216ENST00000559347 COX6CP09669 75 aa5.82□□□□□ -1.48
SPG11-216ENST00000559347 OBSCN-AS1Q96MR7 158 aa5.82□□□□□ -1.48
SPG11-216ENST00000559347 Q96NJ1 140 aa5.82□□□□□ -1.48
SPG11-216ENST00000559347 A0A1W2PNM2 257 aa5.81□□□□□ -1.48
SPG11-216ENST00000559347 A0A1B0GV72 72 aa5.8□□□□□ -1.48
SPG11-216ENST00000559347 H3BQ85 93 aa5.8□□□□□ -1.48
SPG11-216ENST00000559347 Q75L30 129 aa5.79□□□□□ -1.48
SPG11-216ENST00000559347 TMEM256-PLSCR3K7ERE1 68 aa5.78□□□□□ -1.48
SPG11-216ENST00000559347 TRACP01848 142 aa5.78□□□□□ -1.48
SPG11-216ENST00000559347 FLGP20930 4061 aaPredicted RBP5.78□□□□□ -1.48
SPG11-216ENST00000559347 TRBV7-4A0A0J9YYF1 115 aa5.77□□□□□ -1.49
SPG11-216ENST00000559347 MT1HP80294 61 aa5.77□□□□□ -1.49
SPG11-216ENST00000559347 ANKRD29Q8N6D5 301 aa5.77□□□□□ -1.49
SPG11-216ENST00000559347 UBE2V1Q13404 147 aa5.76□□□□□ -1.49
SPG11-216ENST00000559347 LOC105371267A0A1B0GV96 52 aa5.75□□□□□ -1.49
SPG11-216ENST00000559347 SMIM6P0DI80 62 aa5.75□□□□□ -1.49
SPG11-216ENST00000559347 SIGMAR1Q99720 223 aa5.75□□□□□ -1.49
SPG11-216ENST00000559347 CCKP06307 115 aa5.74□□□□□ -1.49
SPG11-216ENST00000559347 SCGB1C2P0DMR2 95 aa5.74□□□□□ -1.49
SPG11-216ENST00000559347 C20orf166-AS1Q96NR2 134 aa5.74□□□□□ -1.49
SPG11-216ENST00000559347 A8MUU9 505 aa5.73□□□□□ -1.49
SPG11-216ENST00000559347 M0R143 59 aa5.73□□□□□ -1.49
SPG11-216ENST00000559347 LCE1DQ5T752 114 aa5.73□□□□□ -1.49
SPG11-216ENST00000559347 ATP11AUNQ6ZP68 121 aa5.73□□□□□ -1.49
SPG11-216ENST00000559347 PCP4L1A6NKN8 68 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms