RNA–Protein interactions for RNA: ENST00000559321.1

LINC02253-201, Transcript of long intergenic non-protein coding RNA 2253, humanhuman

TSL 2 BASIC

Gene LINC02253, Length 448 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02253-201ENST00000559321 TOMM5Q8N4H5 51 aa0.55□□□□□ -2.32
LINC02253-201ENST00000559321 REV3LO60673 3130 aa0.55□□□□□ -2.32
LINC02253-201ENST00000559321 SPTBN1Q01082 2364 aaKnown RBP0.54□□□□□ -2.32
LINC02253-201ENST00000559321 FBN2P35556 2912 aa0.54□□□□□ -2.32
LINC02253-201ENST00000559321 H3BUA1 57 aa0.54□□□□□ -2.32
LINC02253-201ENST00000559321 FCGBPQ9Y6R7 5405 aaPredicted RBP0.54□□□□□ -2.32
LINC02253-201ENST00000559321 TENM1Q9UKZ4 2725 aa0.54□□□□□ -2.32
LINC02253-201ENST00000559321 ANKRD36CQ5JPF3 1778 aa0.53□□□□□ -2.32
LINC02253-201ENST00000559321 A0A1B0GUL6 1792 aa0.52□□□□□ -2.33
LINC02253-201ENST00000559321 F8P00451 2351 aa0.52□□□□□ -2.33
LINC02253-201ENST00000559321 TPRP12270 2363 aaKnown RBP0.52□□□□□ -2.33
LINC02253-201ENST00000559321 PIEZO1Q92508 2521 aa0.52□□□□□ -2.33
LINC02253-201ENST00000559321 FBN3Q75N90 2809 aa0.52□□□□□ -2.33
LINC02253-201ENST00000559321 IQGAP2Q13576 1575 aa0.52□□□□□ -2.33
LINC02253-201ENST00000559321 ALMS1Q8TCU4 4167 aa0.51□□□□□ -2.33
LINC02253-201ENST00000559321 M0R2T5 61 aa0.51□□□□□ -2.33
LINC02253-201ENST00000559321 VWFP04275 2813 aa0.51□□□□□ -2.33
LINC02253-201ENST00000559321 PRLHP81277 87 aa0.51□□□□□ -2.33
LINC02253-201ENST00000559321 MUC5ACP98088 5654 aa0.51□□□□□ -2.33
LINC02253-201ENST00000559321 NOTCH1P46531 2555 aa0.51□□□□□ -2.33
LINC02253-201ENST00000559321 CDC42BPAQ5VT25 1732 aa0.5□□□□□ -2.33
LINC02253-201ENST00000559321 S4R3F8 94 aa0.5□□□□□ -2.33
LINC02253-201ENST00000559321 GVINP1Q7Z2Y8 2422 aa0.5□□□□□ -2.33
LINC02253-201ENST00000559321 PKDREJQ9NTG1 2253 aa0.5□□□□□ -2.33
LINC02253-201ENST00000559321 WNK2Q9Y3S1 2297 aa0.5□□□□□ -2.33
LINC02253-201ENST00000559321 GPR98Q8WXG9 6306 aa0.49□□□□□ -2.33
LINC02253-201ENST00000559321 DEFB135Q30KP9 77 aa0.49□□□□□ -2.33
LINC02253-201ENST00000559321 TOGARAM1Q9Y4F4 1720 aa0.49□□□□□ -2.33
LINC02253-201ENST00000559321 AKAP6Q13023 2319 aa0.48□□□□□ -2.33
LINC02253-201ENST00000559321 KRTAP21-1Q3LI58 79 aa0.48□□□□□ -2.33
LINC02253-201ENST00000559321 SMIM2Q9BVW6 85 aa0.48□□□□□ -2.33
LINC02253-201ENST00000559321 TRANK1O15050 2925 aa0.47□□□□□ -2.33
LINC02253-201ENST00000559321 H0YGG7 62 aa0.47□□□□□ -2.33
LINC02253-201ENST00000559321 OTOGQ6ZRI0 2925 aa0.47□□□□□ -2.33
LINC02253-201ENST00000559321 LMO7Q8WWI1 1683 aa0.46□□□□□ -2.34
LINC02253-201ENST00000559321 PRM1P04553 51 aa0.46□□□□□ -2.34
LINC02253-201ENST00000559321 TIMM8BQ9Y5J9 83 aaPredicted RBP0.46□□□□□ -2.34
LINC02253-201ENST00000559321 CHD6Q8TD26 2715 aa0.46□□□□□ -2.34
LINC02253-201ENST00000559321 BSNQ9UPA5 3926 aa0.46□□□□□ -2.34
LINC02253-201ENST00000559321 FAT2Q9NYQ8 4349 aa0.46□□□□□ -2.34
LINC02253-201ENST00000559321 DSPP15924 2871 aaKnown RBP0.45□□□□□ -2.34
LINC02253-201ENST00000559321 DEFB106AQ8N104 65 aa0.45□□□□□ -2.34
LINC02253-201ENST00000559321 FAM208AQ9UK61 1670 aaKnown RBP0.45□□□□□ -2.34
LINC02253-201ENST00000559321 KIF21BO75037 1637 aa0.45□□□□□ -2.34
LINC02253-201ENST00000559321 ATRQ13535 2644 aa0.45□□□□□ -2.34
LINC02253-201ENST00000559321 ATP7AQ04656 1500 aa0.43□□□□□ -2.34
LINC02253-201ENST00000559321 UNC79Q9P2D8 2635 aa0.43□□□□□ -2.34
LINC02253-201ENST00000559321 ABCA2Q9BZC7 2435 aa0.43□□□□□ -2.34
LINC02253-201ENST00000559321 IGLV5-48A0A075B6I7 105 aa0.43□□□□□ -2.34
LINC02253-201ENST00000559321 NOP10Q9NPE3 64 aaKnown RBP0.43□□□□□ -2.34
LINC02253-201ENST00000559321 TRPM2O94759 1503 aa0.43□□□□□ -2.34
LINC02253-201ENST00000559321 IQGAP1P46940 1657 aa0.43□□□□□ -2.34
LINC02253-201ENST00000559321 TNXBP22105 4242 aa0.43□□□□□ -2.34
LINC02253-201ENST00000559321 C9orf92A6NGG3 77 aa0.42□□□□□ -2.34
LINC02253-201ENST00000559321 TFF3Q07654 80 aa0.42□□□□□ -2.34
LINC02253-201ENST00000559321 SYNE1Q8NF91 8797 aaKnown RBP0.42□□□□□ -2.34
LINC02253-201ENST00000559321 KNL1Q8NG31 2342 aa0.42□□□□□ -2.34
LINC02253-201ENST00000559321 SAMD9LQ8IVG5 1584 aa0.41□□□□□ -2.34
LINC02253-201ENST00000559321 PRKDCP78527 4128 aaKnown RBP0.41□□□□□ -2.34
LINC02253-201ENST00000559321 AKAP13Q12802 2813 aa0.41□□□□□ -2.34
LINC02253-201ENST00000559321 SPRR2DP22532 72 aa0.41□□□□□ -2.34
LINC02253-201ENST00000559321 TOP2AP11388 1531 aaKnown RBP0.41□□□□□ -2.34
LINC02253-201ENST00000559321 HUWE1Q7Z6Z7 4374 aaKnown RBP0.41□□□□□ -2.34
LINC02253-201ENST00000559321 PRRC2CQ9Y520 2896 aaKnown RBP0.4□□□□□ -2.34
LINC02253-201ENST00000559321 NDUFA1O15239 70 aa0.4□□□□□ -2.35
LINC02253-201ENST00000559321 DEFB131AP59861 70 aa0.4□□□□□ -2.35
LINC02253-201ENST00000559321 WFDC10BQ8IUB3 73 aa0.4□□□□□ -2.35
LINC02253-201ENST00000559321 KAAG1Q9UBP8 84 aa0.4□□□□□ -2.35
LINC02253-201ENST00000559321 EP300Q09472 2414 aaPredicted RBP0.4□□□□□ -2.35
LINC02253-201ENST00000559321 PKD1L1Q8TDX9 2849 aa0.4□□□□□ -2.35
LINC02253-201ENST00000559321 DDX60Q8IY21 1712 aaKnown RBP0.39□□□□□ -2.35
LINC02253-201ENST00000559321 PDE4DIPQ5VU43 2346 aa0.39□□□□□ -2.35
LINC02253-201ENST00000559321 NFAT5O94916 1531 aa0.38□□□□□ -2.35
LINC02253-201ENST00000559321 PCNX1Q96RV3 2341 aa0.38□□□□□ -2.35
LINC02253-201ENST00000559321 SPTA1P02549 2419 aa0.38□□□□□ -2.35
LINC02253-201ENST00000559321 ZFYVE26Q68DK2 2539 aa0.38□□□□□ -2.35
LINC02253-201ENST00000559321 CSPG4Q6UVK1 2322 aa0.38□□□□□ -2.35
LINC02253-201ENST00000559321 CHD8Q9HCK8 2581 aa0.38□□□□□ -2.35
LINC02253-201ENST00000559321 PTPN13Q12923 2485 aa0.38□□□□□ -2.35
LINC02253-201ENST00000559321 A8MTW9 85 aa0.37□□□□□ -2.35
LINC02253-201ENST00000559321 SPRR2BP35325 72 aa0.37□□□□□ -2.35
LINC02253-201ENST00000559321 KRTAP5-10Q6L8G5 202 aa0.37□□□□□ -2.35
LINC02253-201ENST00000559321 LRP1Q07954 4544 aaKnown RBP0.37□□□□□ -2.35
LINC02253-201ENST00000559321 MUC16Q8WXI7 14507 aa0.36□□□□□ -2.35
LINC02253-201ENST00000559321 LPAP08519 4548 aa0.36□□□□□ -2.35
LINC02253-201ENST00000559321 HECTD1Q9ULT8 2610 aa0.35□□□□□ -2.35
LINC02253-201ENST00000559321 CELSR1Q9NYQ6 3014 aa0.35□□□□□ -2.35
LINC02253-201ENST00000559321 MMP24-AS1A0A0U1RRL7 71 aa0.35□□□□□ -2.35
LINC02253-201ENST00000559321 UBR5O95071 2799 aaPredicted RBP0.34□□□□□ -2.36
LINC02253-201ENST00000559321 MYCBP2O75592 4640 aa0.33□□□□□ -2.36
LINC02253-201ENST00000559321 M0QY20 66 aa0.33□□□□□ -2.36
LINC02253-201ENST00000559321 M0QZ58 72 aa0.33□□□□□ -2.36
LINC02253-201ENST00000559321 LYSTQ99698 3801 aa0.33□□□□□ -2.36
LINC02253-201ENST00000559321 SETXQ7Z333 2677 aaKnown RBP0.33□□□□□ -2.36
LINC02253-201ENST00000559321 NCOR1O75376 2440 aa0.33□□□□□ -2.36
LINC02253-201ENST00000559321 CACNA1AO00555 2505 aa0.32□□□□□ -2.36
LINC02253-201ENST00000559321 TNRC18O15417 2968 aaPredicted RBP0.32□□□□□ -2.36
LINC02253-201ENST00000559321 KMT2DO14686 5537 aa0.32□□□□□ -2.36
LINC02253-201ENST00000559321 HIVEP3Q5T1R4 2406 aa0.32□□□□□ -2.36
LINC02253-201ENST00000559321 HRNRQ86YZ3 2850 aaPredicted RBP0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms