RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 KRTAP11-1Q8IUC1 163 aa10.37□□□□□ -0.75
SPG11-215ENST00000559193 DNAH9Q9NYC9 4486 aa10.37□□□□□ -0.75
SPG11-215ENST00000559193 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.37□□□□□ -0.75
SPG11-215ENST00000559193 A0A087WSZ3 146 aa10.36□□□□□ -0.75
SPG11-215ENST00000559193 ZCCHC13Q8WW36 166 aaKnown RBP10.36□□□□□ -0.75
SPG11-215ENST00000559193 CHTF8P0CG12 524 aa10.35□□□□□ -0.75
SPG11-215ENST00000559193 COL6A5A8TX70 2615 aa10.35□□□□□ -0.75
SPG11-215ENST00000559193 PHF5AQ7RTV0 110 aaKnown RBP10.34□□□□□ -0.75
SPG11-215ENST00000559193 UBE2AP49459 152 aa10.34□□□□□ -0.75
SPG11-215ENST00000559193 UBE2DNLQ8IWF7 75 aa10.32□□□□□ -0.76
SPG11-215ENST00000559193 PRO0628Q9UI54 55 aa10.32□□□□□ -0.76
SPG11-215ENST00000559193 APLNQ9ULZ1 77 aa10.31□□□□□ -0.76
SPG11-215ENST00000559193 STAB2Q8WWQ8 2551 aa10.31□□□□□ -0.76
SPG11-215ENST00000559193 WFDC13Q8IUB5 93 aa10.3□□□□□ -0.76
SPG11-215ENST00000559193 RPL37AP61513 92 aaKnown RBP10.29□□□□□ -0.76
SPG11-215ENST00000559193 SPRR1BP22528 89 aa10.29□□□□□ -0.76
SPG11-215ENST00000559193 C14orf177Q52M58 125 aa10.29□□□□□ -0.76
SPG11-215ENST00000559193 H0Y9J4 135 aa10.28□□□□□ -0.76
SPG11-215ENST00000559193 CSMD3Q7Z407 3707 aa10.27□□□□□ -0.76
SPG11-215ENST00000559193 MPLKIPQ8TAP9 179 aa10.26□□□□□ -0.77
SPG11-215ENST00000559193 MGAM2Q2M2H8 2515 aa10.26□□□□□ -0.77
SPG11-215ENST00000559193 hDV103S1A0JD37 113 aa10.25□□□□□ -0.77
SPG11-215ENST00000559193 KRTAP29-1A8MX34 341 aaPredicted RBP10.25□□□□□ -0.77
SPG11-215ENST00000559193 C9orf163Q8N9P6 203 aa10.25□□□□□ -0.77
SPG11-215ENST00000559193 COL7A1Q02388 2944 aa10.25□□□□□ -0.77
SPG11-215ENST00000559193 LRCOL1A6NCL2 159 aa10.23□□□□□ -0.77
SPG11-215ENST00000559193 DYNC2H1Q8NCM8 4307 aaKnown RBP10.23□□□□□ -0.77
SPG11-215ENST00000559193 SRRM2Q9UQ35 2752 aaKnown RBP10.22□□□□□ -0.77
SPG11-215ENST00000559193 C1orf64Q8NEQ6 169 aa10.22□□□□□ -0.77
SPG11-215ENST00000559193 PANO1I0J062 215 aa10.21□□□□□ -0.77
SPG11-215ENST00000559193 LINC00472Q9H8W2 130 aa10.21□□□□□ -0.78
SPG11-215ENST00000559193 PRR15Q8IV56 129 aa10.21□□□□□ -0.78
SPG11-215ENST00000559193 B9D2Q9BPU9 175 aa10.2□□□□□ -0.78
SPG11-215ENST00000559193 DNAH7Q8WXX0 4024 aa10.19□□□□□ -0.78
SPG11-215ENST00000559193 BRK1Q8WUW1 75 aa10.19□□□□□ -0.78
SPG11-215ENST00000559193 PKIGQ9Y2B9 76 aa10.19□□□□□ -0.78
SPG11-215ENST00000559193 CASC2Q6XLA1 102 aa10.19□□□□□ -0.78
SPG11-215ENST00000559193 A8MWP4 228 aa10.18□□□□□ -0.78
SPG11-215ENST00000559193 KRTAP13-1Q8IUC0 172 aa10.18□□□□□ -0.78
SPG11-215ENST00000559193 MP68P56378 58 aa10.18□□□□□ -0.78
SPG11-215ENST00000559193 PRR4Q16378 134 aa10.18□□□□□ -0.78
SPG11-215ENST00000559193 CYP4F30PQ9H0H9 118 aa10.18□□□□□ -0.78
SPG11-215ENST00000559193 TRAV22A0A0B4J277 110 aa10.17□□□□□ -0.78
SPG11-215ENST00000559193 NBDYA0A0U1RRE5 68 aa10.17□□□□□ -0.78
SPG11-215ENST00000559193 Q6ZRN7 208 aaPredicted RBP10.17□□□□□ -0.78
SPG11-215ENST00000559193 NDUFB1O75438 58 aa10.15□□□□□ -0.78
SPG11-215ENST00000559193 LINC00208Q96KT6 92 aa10.15□□□□□ -0.78
SPG11-215ENST00000559193 PLECQ15149 4684 aaKnown RBP10.14□□□□□ -0.79
SPG11-215ENST00000559193 TENM2Q9NT68 2774 aa10.13□□□□□ -0.79
SPG11-215ENST00000559193 H0Y9P7 68 aa10.13□□□□□ -0.79
SPG11-215ENST00000559193 MDFIQ99750 246 aa10.11□□□□□ -0.79
SPG11-215ENST00000559193 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.11□□□□□ -0.79
SPG11-215ENST00000559193 SPACA4Q8TDM5 124 aa10.1□□□□□ -0.79
SPG11-215ENST00000559193 MMP24-AS1A0A0U1RRL7 71 aa10.09□□□□□ -0.79
SPG11-215ENST00000559193 Q1T7F1 81 aa10.09□□□□□ -0.79
SPG11-215ENST00000559193 H3BPC8 53 aa10.08□□□□□ -0.8
SPG11-215ENST00000559193 IGLV9-49A0A0B4J1Y8 123 aa10.07□□□□□ -0.8
SPG11-215ENST00000559193 Q96NJ1 140 aa10.06□□□□□ -0.8
SPG11-215ENST00000559193 NUPR2A6NF83 97 aa10.06□□□□□ -0.8
SPG11-215ENST00000559193 SPANXA2-OT1Q8N9U9 137 aa10.04□□□□□ -0.8
SPG11-215ENST00000559193 LINC00483Q53H64 154 aa10.03□□□□□ -0.8
SPG11-215ENST00000559193 A0A087WTM6 91 aa10□□□□□ -0.81
SPG11-215ENST00000559193 VPS13DQ5THJ4 4388 aa9.99□□□□□ -0.81
SPG11-215ENST00000559193 MOBPQ13875 183 aa9.99□□□□□ -0.81
SPG11-215ENST00000559193 ASB16-AS1Q495Z4 193 aa9.99□□□□□ -0.81
SPG11-215ENST00000559193 C1orf195Q5TG92 126 aa9.99□□□□□ -0.81
SPG11-215ENST00000559193 PSPHP1O15172 72 aa9.98□□□□□ -0.81
SPG11-215ENST00000559193 STARD9Q9P2P6 4700 aa9.98□□□□□ -0.81
SPG11-215ENST00000559193 WWC2-AS2Q96NR7 200 aa9.97□□□□□ -0.81
SPG11-215ENST00000559193 PSORS1C2Q9UIG4 136 aa9.96□□□□□ -0.81
SPG11-215ENST00000559193 C8orf17Q9NRJ1 99 aa9.95□□□□□ -0.82
SPG11-215ENST00000559193 IGLV5-52A0A0A0MRZ9 124 aa9.95□□□□□ -0.82
SPG11-215ENST00000559193 ZNF706Q9Y5V0 76 aaPredicted RBP9.95□□□□□ -0.82
SPG11-215ENST00000559193 RTL8CO15255 209 aa9.94□□□□□ -0.82
SPG11-215ENST00000559193 ANAPC11Q9NYG5 84 aa9.93□□□□□ -0.82
SPG11-215ENST00000559193 DNAH8Q96JB1 4490 aa9.92□□□□□ -0.82
SPG11-215ENST00000559193 TP53AIP1Q9HCN2 124 aa9.91□□□□□ -0.82
SPG11-215ENST00000559193 HECTD4Q9Y4D8 3996 aa9.91□□□□□ -0.82
SPG11-215ENST00000559193 A0A1B0GVX0 72 aa9.91□□□□□ -0.82
SPG11-215ENST00000559193 IGHV6-1A0A0B4J1U7 121 aa9.9□□□□□ -0.82
SPG11-215ENST00000559193 A8MUN3 132 aa9.9□□□□□ -0.82
SPG11-215ENST00000559193 PLAC8Q9NZF1 115 aa9.9□□□□□ -0.82
SPG11-215ENST00000559193 V9GYY9 64 aa9.9□□□□□ -0.82
SPG11-215ENST00000559193 IGLV7-46A0A075B6I9 117 aa9.89□□□□□ -0.83
SPG11-215ENST00000559193 ZNF861PO60384 105 aa9.89□□□□□ -0.83
SPG11-215ENST00000559193 DNAH17Q9UFH2 4485 aa9.89□□□□□ -0.83
SPG11-215ENST00000559193 Q6ZR54 194 aa9.88□□□□□ -0.83
SPG11-215ENST00000559193 PRKDCP78527 4128 aaKnown RBP9.88□□□□□ -0.83
SPG11-215ENST00000559193 CD164Q04900 197 aa9.87□□□□□ -0.83
SPG11-215ENST00000559193 PCOTHQ58A44 107 aa9.87□□□□□ -0.83
SPG11-215ENST00000559193 Q8N9P0 234 aaPredicted RBP9.87□□□□□ -0.83
SPG11-215ENST00000559193 DNAH2Q9P225 4427 aa9.87□□□□□ -0.83
SPG11-215ENST00000559193 FRAS1Q86XX4 4008 aa9.87□□□□□ -0.83
SPG11-215ENST00000559193 Q5VV11 94 aa9.85□□□□□ -0.83
SPG11-215ENST00000559193 COA5Q86WW8 74 aa9.85□□□□□ -0.83
SPG11-215ENST00000559193 A0A087X002 238 aa9.85□□□□□ -0.83
SPG11-215ENST00000559193 NDUFS5O43920 106 aa9.85□□□□□ -0.83
SPG11-215ENST00000559193 NOTCH2NLQ7Z3S9 236 aa9.85□□□□□ -0.83
SPG11-215ENST00000559193 CDK2AP2O75956 126 aa9.84□□□□□ -0.83
SPG11-215ENST00000559193 MRPL34Q9BQ48 92 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms