RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 LCE2AQ5TA79 106 aaPredicted RBP6.87□□□□□ -1.31
SMAD3-208ENST00000558827 LINC00575Q6W349 94 aa6.87□□□□□ -1.31
SMAD3-208ENST00000558827 NHP2Q9NX24 153 aaKnown RBP6.87□□□□□ -1.31
SMAD3-208ENST00000558827 Q6ZQY7 126 aa6.86□□□□□ -1.31
SMAD3-208ENST00000558827 C2orf91Q6ZV80 131 aa6.86□□□□□ -1.31
SMAD3-208ENST00000558827 hADV29S1A0JD25 119 aa6.85□□□□□ -1.31
SMAD3-208ENST00000558827 CD164Q04900 197 aa6.85□□□□□ -1.31
SMAD3-208ENST00000558827 TMEM238LA0A1B0GVL6 79 aa6.84□□□□□ -1.31
SMAD3-208ENST00000558827 A6NJY4 79 aa6.84□□□□□ -1.31
SMAD3-208ENST00000558827 C1orf195Q5TG92 126 aa6.84□□□□□ -1.31
SMAD3-208ENST00000558827 F8WEM9 126 aa6.83□□□□□ -1.32
SMAD3-208ENST00000558827 PCOTHQ58A44 107 aa6.83□□□□□ -1.32
SMAD3-208ENST00000558827 HSD52Q0P140 79 aa6.82□□□□□ -1.32
SMAD3-208ENST00000558827 CEND1Q8N111 149 aa6.82□□□□□ -1.32
SMAD3-208ENST00000558827 TSTD3H0UI37 97 aa6.81□□□□□ -1.32
SMAD3-208ENST00000558827 CFC1BP0CG36 223 aa6.81□□□□□ -1.32
SMAD3-208ENST00000558827 CFC1P0CG37 223 aa6.81□□□□□ -1.32
SMAD3-208ENST00000558827 RAB37Q96AX2 223 aa6.81□□□□□ -1.32
SMAD3-208ENST00000558827 IGLV8-61A0A075B6I0 122 aa6.78□□□□□ -1.32
SMAD3-208ENST00000558827 H3BUT2 72 aa6.78□□□□□ -1.32
SMAD3-208ENST00000558827 OCIAD2Q56VL3 154 aa6.78□□□□□ -1.32
SMAD3-208ENST00000558827 IGFL1Q6UW32 110 aa6.78□□□□□ -1.32
SMAD3-208ENST00000558827 A0A0B4J2C4 111 aa6.77□□□□□ -1.33
SMAD3-208ENST00000558827 FXYD2P54710 66 aa6.77□□□□□ -1.33
SMAD3-208ENST00000558827 BVES-AS1Q5T3Y7 98 aa6.77□□□□□ -1.33
SMAD3-208ENST00000558827 Q5XG85 94 aa6.77□□□□□ -1.33
SMAD3-208ENST00000558827 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.77□□□□□ -1.33
SMAD3-208ENST00000558827 SNHG12Q9BXW3 62 aa6.77□□□□□ -1.33
SMAD3-208ENST00000558827 KRTAP9-2Q9BYQ4 174 aa6.77□□□□□ -1.33
SMAD3-208ENST00000558827 TCL1BO95988 128 aa6.76□□□□□ -1.33
SMAD3-208ENST00000558827 M0R143 59 aa6.75□□□□□ -1.33
SMAD3-208ENST00000558827 FAM218AQ96MZ4 157 aa6.75□□□□□ -1.33
SMAD3-208ENST00000558827 PRO1854Q9UHT4 67 aa6.75□□□□□ -1.33
SMAD3-208ENST00000558827 TRBV7-7A0A0K0K1E9 115 aa6.74□□□□□ -1.33
SMAD3-208ENST00000558827 Q6JHZ5 121 aa6.74□□□□□ -1.33
SMAD3-208ENST00000558827 CLEC2BQ92478 149 aa6.74□□□□□ -1.33
SMAD3-208ENST00000558827 K7ERJ3 54 aa6.7□□□□□ -1.34
SMAD3-208ENST00000558827 LCE2CQ5TA81 110 aa6.7□□□□□ -1.34
SMAD3-208ENST00000558827 H0YGX0 51 aa6.69□□□□□ -1.34
SMAD3-208ENST00000558827 SNCGO76070 127 aa6.69□□□□□ -1.34
SMAD3-208ENST00000558827 RPL37P61927 97 aaKnown RBP6.69□□□□□ -1.34
SMAD3-208ENST00000558827 A0A1B0GV72 72 aa6.68□□□□□ -1.34
SMAD3-208ENST00000558827 FABP2P12104 132 aa6.68□□□□□ -1.34
SMAD3-208ENST00000558827 PSMB2P49721 201 aa6.68□□□□□ -1.34
SMAD3-208ENST00000558827 NDUFV3P56181 108 aaKnown RBP6.68□□□□□ -1.34
SMAD3-208ENST00000558827 KRTAP19-2Q3LHN2 52 aa6.68□□□□□ -1.34
SMAD3-208ENST00000558827 COX6CP09669 75 aa6.67□□□□□ -1.34
SMAD3-208ENST00000558827 PPDPFLQ8WWR9 84 aa6.67□□□□□ -1.34
SMAD3-208ENST00000558827 OBSCN-AS1Q96MR7 158 aa6.67□□□□□ -1.34
SMAD3-208ENST00000558827 LST1O00453 97 aa6.66□□□□□ -1.34
SMAD3-208ENST00000558827 TRIAP1O43715 76 aa6.66□□□□□ -1.34
SMAD3-208ENST00000558827 BATFQ16520 125 aa6.66□□□□□ -1.34
SMAD3-208ENST00000558827 H3BMG7 143 aa6.65□□□□□ -1.34
SMAD3-208ENST00000558827 A0A087WSZ3 146 aa6.62□□□□□ -1.35
SMAD3-208ENST00000558827 SCGB1C2P0DMR2 95 aa6.62□□□□□ -1.35
SMAD3-208ENST00000558827 MT1HP80294 61 aa6.62□□□□□ -1.35
SMAD3-208ENST00000558827 Q96NJ1 140 aa6.61□□□□□ -1.35
SMAD3-208ENST00000558827 A0A1B0GX51 115 aa6.6□□□□□ -1.35
SMAD3-208ENST00000558827 A0A1W2PNM2 257 aa6.6□□□□□ -1.35
SMAD3-208ENST00000558827 DNAL4O96015 105 aa6.6□□□□□ -1.35
SMAD3-208ENST00000558827 GHRHP01286 108 aa6.6□□□□□ -1.35
SMAD3-208ENST00000558827 TEN1Q86WV5 123 aa6.6□□□□□ -1.35
SMAD3-208ENST00000558827 COX6B2Q6YFQ2 88 aa6.59□□□□□ -1.35
SMAD3-208ENST00000558827 PCP4L1A6NKN8 68 aa6.58□□□□□ -1.36
SMAD3-208ENST00000558827 LYRM7Q5U5X0 104 aa6.58□□□□□ -1.36
SMAD3-208ENST00000558827 Q6Q795 121 aa6.58□□□□□ -1.36
SMAD3-208ENST00000558827 SS18L2Q9UHA2 77 aa6.58□□□□□ -1.36
SMAD3-208ENST00000558827 DSCR10P59022 87 aa6.57□□□□□ -1.36
SMAD3-208ENST00000558827 ATP11AUNQ6ZP68 121 aa6.57□□□□□ -1.36
SMAD3-208ENST00000558827 ORMDL1Q9P0S3 153 aa6.57□□□□□ -1.36
SMAD3-208ENST00000558827 ANKRD29Q8N6D5 301 aa6.56□□□□□ -1.36
SMAD3-208ENST00000558827 M0R2T5 61 aa6.55□□□□□ -1.36
SMAD3-208ENST00000558827 DEFB116Q30KQ4 102 aa6.55□□□□□ -1.36
SMAD3-208ENST00000558827 Q75L30 129 aa6.55□□□□□ -1.36
SMAD3-208ENST00000558827 SIGMAR1Q99720 223 aa6.55□□□□□ -1.36
SMAD3-208ENST00000558827 NAA38Q9BRA0 125 aaKnown RBP6.55□□□□□ -1.36
SMAD3-208ENST00000558827 KRTAP9-6A0A140TA67 174 aa6.54□□□□□ -1.36
SMAD3-208ENST00000558827 H3BQ85 93 aa6.53□□□□□ -1.36
SMAD3-208ENST00000558827 TRACP01848 142 aa6.53□□□□□ -1.36
SMAD3-208ENST00000558827 C9orf118A6NHY6 69 aa6.52□□□□□ -1.37
SMAD3-208ENST00000558827 ATXN8Q156A1 80 aa6.52□□□□□ -1.37
SMAD3-208ENST00000558827 COL5A1-AS1Q5SY13 56 aa6.52□□□□□ -1.37
SMAD3-208ENST00000558827 IGKV4-1P06312 121 aa6.51□□□□□ -1.37
SMAD3-208ENST00000558827 VPS25Q9BRG1 176 aa6.51□□□□□ -1.37
SMAD3-208ENST00000558827 FLGP20930 4061 aaPredicted RBP6.51□□□□□ -1.37
SMAD3-208ENST00000558827 TRBV20-1A0A075B6N2 111 aa6.5□□□□□ -1.37
SMAD3-208ENST00000558827 TMEM256-PLSCR3K7ERE1 68 aa6.5□□□□□ -1.37
SMAD3-208ENST00000558827 TAX1BP3O14907 124 aa6.5□□□□□ -1.37
SMAD3-208ENST00000558827 CCKP06307 115 aa6.5□□□□□ -1.37
SMAD3-208ENST00000558827 LCE2DQ5TA82 110 aaPredicted RBP6.5□□□□□ -1.37
SMAD3-208ENST00000558827 FSIP2Q5CZC0 6907 aa6.49□□□□□ -1.37
SMAD3-208ENST00000558827 KRTAP10-6P60371 365 aaPredicted RBP6.49□□□□□ -1.37
SMAD3-208ENST00000558827 NOTCH2NLQ7Z3S9 236 aa6.49□□□□□ -1.37
SMAD3-208ENST00000558827 TRBV7-4A0A0J9YYF1 115 aa6.48□□□□□ -1.37
SMAD3-208ENST00000558827 A0A1W2PPM0 123 aa6.48□□□□□ -1.37
SMAD3-208ENST00000558827 A8MUU9 505 aa6.48□□□□□ -1.37
SMAD3-208ENST00000558827 C20orf166-AS1Q96NR2 134 aa6.48□□□□□ -1.37
SMAD3-208ENST00000558827 BAALC-AS2P0C853 105 aa6.46□□□□□ -1.38
SMAD3-208ENST00000558827 LORP23490 312 aaPredicted RBP6.46□□□□□ -1.38
SMAD3-208ENST00000558827 LINC00313P59037 77 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms