RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 Q6ZQY7 126 aa6.54□□□□□ -1.36
TPM1-212ENST00000558347 DSCR8Q96T75 97 aa6.54□□□□□ -1.36
TPM1-212ENST00000558347 PANO1I0J062 215 aa6.53□□□□□ -1.36
TPM1-212ENST00000558347 KRTAP10-4P60372 401 aaPredicted RBP6.53□□□□□ -1.36
TPM1-212ENST00000558347 XAGE1AQ9HD64 81 aa6.53□□□□□ -1.36
TPM1-212ENST00000558347 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.53□□□□□ -1.36
TPM1-212ENST00000558347 TRBV7-4A0A0J9YYF1 115 aa6.5□□□□□ -1.37
TPM1-212ENST00000558347 A0A087WVE0 104 aa6.5□□□□□ -1.37
TPM1-212ENST00000558347 CXCL6P80162 114 aa6.5□□□□□ -1.37
TPM1-212ENST00000558347 PLA2G2DQ9UNK4 145 aa6.5□□□□□ -1.37
TPM1-212ENST00000558347 LOC107984640A0A0U1RRK4 108 aa6.49□□□□□ -1.37
TPM1-212ENST00000558347 Q6ZRP5 223 aa6.49□□□□□ -1.37
TPM1-212ENST00000558347 PKIGQ9Y2B9 76 aa6.49□□□□□ -1.37
TPM1-212ENST00000558347 Q6ZVQ6 151 aa6.48□□□□□ -1.37
TPM1-212ENST00000558347 SMIM20Q8N5G0 67 aa6.48□□□□□ -1.37
TPM1-212ENST00000558347 CHTF8P0CG12 524 aa6.47□□□□□ -1.37
TPM1-212ENST00000558347 TMEM258P61165 79 aa6.47□□□□□ -1.37
TPM1-212ENST00000558347 KCNQ1DNQ9H478 68 aa6.47□□□□□ -1.37
TPM1-212ENST00000558347 IGLV5-37A0A075B6J1 123 aa6.46□□□□□ -1.37
TPM1-212ENST00000558347 KRTAP29-1A8MX34 341 aaPredicted RBP6.46□□□□□ -1.37
TPM1-212ENST00000558347 LINC01547P58512 204 aaPredicted RBP6.46□□□□□ -1.37
TPM1-212ENST00000558347 RPL37AP61513 92 aaKnown RBP6.46□□□□□ -1.37
TPM1-212ENST00000558347 FAM19A1Q7Z5A9 133 aa6.46□□□□□ -1.37
TPM1-212ENST00000558347 SVIPQ8NHG7 77 aa6.46□□□□□ -1.37
TPM1-212ENST00000558347 J3QL48 77 aa6.45□□□□□ -1.38
TPM1-212ENST00000558347 NKAPP1Q8N9T2 125 aa6.45□□□□□ -1.38
TPM1-212ENST00000558347 SPACA4Q8TDM5 124 aa6.45□□□□□ -1.38
TPM1-212ENST00000558347 HMCN2Q8NDA2 5059 aa6.45□□□□□ -1.38
TPM1-212ENST00000558347 RPS28P62857 69 aaKnown RBP6.45□□□□□ -1.38
TPM1-212ENST00000558347 TRAV7A0A075B6U4 112 aa6.44□□□□□ -1.38
TPM1-212ENST00000558347 PRYO14603 147 aa6.44□□□□□ -1.38
TPM1-212ENST00000558347 A0A096LNI7 61 aa6.43□□□□□ -1.38
TPM1-212ENST00000558347 A0A1B0GW54 56 aa6.43□□□□□ -1.38
TPM1-212ENST00000558347 J3KT08 172 aa6.43□□□□□ -1.38
TPM1-212ENST00000558347 DPH3Q96FX2 82 aa6.43□□□□□ -1.38
TPM1-212ENST00000558347 DHRS4-AS1Q9P1J3 65 aa6.43□□□□□ -1.38
TPM1-212ENST00000558347 IGKV2-24A0A0C4DH68 120 aa6.42□□□□□ -1.38
TPM1-212ENST00000558347 C7orf33Q8WU49 177 aa6.42□□□□□ -1.38
TPM1-212ENST00000558347 PLAC8Q9NZF1 115 aa6.42□□□□□ -1.38
TPM1-212ENST00000558347 LINC00474Q9P2X8 69 aa6.42□□□□□ -1.38
TPM1-212ENST00000558347 SERTAD4-AS1Q5TG53 156 aa6.4□□□□□ -1.38
TPM1-212ENST00000558347 TNXBP22105 4242 aa6.4□□□□□ -1.39
TPM1-212ENST00000558347 OXTP01178 125 aa6.4□□□□□ -1.39
TPM1-212ENST00000558347 SPRR1AP35321 89 aa6.4□□□□□ -1.39
TPM1-212ENST00000558347 IGLV5-48A0A075B6I7 105 aa6.39□□□□□ -1.39
TPM1-212ENST00000558347 KRTAP4-16G5E9R7 235 aaPredicted RBP6.39□□□□□ -1.39
TPM1-212ENST00000558347 KRTAP7-1Q8IUC3 87 aa6.39□□□□□ -1.39
TPM1-212ENST00000558347 IGLV1-50A0A075B6I6 118 aa6.38□□□□□ -1.39
TPM1-212ENST00000558347 Q6ZRX8 168 aa6.38□□□□□ -1.39
TPM1-212ENST00000558347 CYSTM1Q9H1C7 97 aa6.38□□□□□ -1.39
TPM1-212ENST00000558347 ETDCA0A1B0GVM5 59 aa6.37□□□□□ -1.39
TPM1-212ENST00000558347 A0A1W2PNN7 141 aa6.37□□□□□ -1.39
TPM1-212ENST00000558347 FAM168BA1KXE4 195 aa6.37□□□□□ -1.39
TPM1-212ENST00000558347 Q8N377 158 aa6.37□□□□□ -1.39
TPM1-212ENST00000558347 FAM19A5Q7Z5A7 132 aaPredicted RBP6.36□□□□□ -1.39
TPM1-212ENST00000558347 KLKP1Q107X0 134 aa6.35□□□□□ -1.39
TPM1-212ENST00000558347 NREPQ16612 68 aa6.35□□□□□ -1.39
TPM1-212ENST00000558347 UBR4Q5T4S7 5183 aa6.35□□□□□ -1.39
TPM1-212ENST00000558347 ERC2-IT1O76042 136 aa6.35□□□□□ -1.39
TPM1-212ENST00000558347 MRPL55Q7Z7F7 128 aaKnown RBP6.35□□□□□ -1.39
TPM1-212ENST00000558347 C20orf197Q8N268 126 aa6.35□□□□□ -1.39
TPM1-212ENST00000558347 NDUFC1O43677 76 aa6.34□□□□□ -1.39
TPM1-212ENST00000558347 MT1HL1P0DM35 61 aa6.33□□□□□ -1.4
TPM1-212ENST00000558347 Q9BRP9 147 aa6.33□□□□□ -1.4
TPM1-212ENST00000558347 IGKV4-1P06312 121 aa6.32□□□□□ -1.4
TPM1-212ENST00000558347 BPY2O14599 106 aa6.31□□□□□ -1.4
TPM1-212ENST00000558347 DEFB105AQ8NG35 78 aa6.31□□□□□ -1.4
TPM1-212ENST00000558347 FAM236DA0A1B0GTK5 79 aa6.3□□□□□ -1.4
TPM1-212ENST00000558347 RPL37AP8A6NKH3 93 aa6.3□□□□□ -1.4
TPM1-212ENST00000558347 FAM236CP0DP71 79 aa6.3□□□□□ -1.4
TPM1-212ENST00000558347 Q8NBF4 154 aa6.3□□□□□ -1.4
TPM1-212ENST00000558347 SPRR4Q96PI1 79 aa6.3□□□□□ -1.4
TPM1-212ENST00000558347 H7BZZ5 65 aa6.3□□□□□ -1.4
TPM1-212ENST00000558347 C1orf137Q5JT78 98 aa6.3□□□□□ -1.4
TPM1-212ENST00000558347 REG3GQ6UW15 175 aa6.3□□□□□ -1.4
TPM1-212ENST00000558347 PHF5AQ7RTV0 110 aaKnown RBP6.3□□□□□ -1.4
TPM1-212ENST00000558347 ATP5EP56381 51 aaPredicted RBP6.29□□□□□ -1.4
TPM1-212ENST00000558347 A0A1W2PNM2 257 aa6.28□□□□□ -1.4
TPM1-212ENST00000558347 SERP1Q9Y6X1 66 aa6.28□□□□□ -1.4
TPM1-212ENST00000558347 UBE2BP63146 152 aa6.27□□□□□ -1.41
TPM1-212ENST00000558347 LCE2DQ5TA82 110 aaPredicted RBP6.26□□□□□ -1.41
TPM1-212ENST00000558347 SPINK6Q6UWN8 80 aa6.26□□□□□ -1.41
TPM1-212ENST00000558347 ST20-AS1Q8NBB2 130 aa6.26□□□□□ -1.41
TPM1-212ENST00000558347 OCR1Q9BZK8 76 aa6.26□□□□□ -1.41
TPM1-212ENST00000558347 IGLV8-61A0A075B6I0 122 aa6.25□□□□□ -1.41
TPM1-212ENST00000558347 F8WEM9 126 aa6.25□□□□□ -1.41
TPM1-212ENST00000558347 KRTAP11-1Q8IUC1 163 aa6.25□□□□□ -1.41
TPM1-212ENST00000558347 PSORS1C2Q9UIG4 136 aa6.25□□□□□ -1.41
TPM1-212ENST00000558347 SMIM29Q86T20 159 aa6.24□□□□□ -1.41
TPM1-212ENST00000558347 TMEM254Q8TBM7 123 aa6.24□□□□□ -1.41
TPM1-212ENST00000558347 H0Y9J4 135 aa6.23□□□□□ -1.41
TPM1-212ENST00000558347 Q8N9L7 120 aa6.23□□□□□ -1.41
TPM1-212ENST00000558347 SNURFQ9Y675 71 aa6.23□□□□□ -1.41
TPM1-212ENST00000558347 A0A0U1RQV1 116 aa6.22□□□□□ -1.41
TPM1-212ENST00000558347 KRTAP10-8P60410 259 aa6.21□□□□□ -1.42
TPM1-212ENST00000558347 RNF213Q63HN8 5207 aa6.2□□□□□ -1.42
TPM1-212ENST00000558347 SPRR1BP22528 89 aa6.2□□□□□ -1.42
TPM1-212ENST00000558347 DSCR10P59022 87 aa6.2□□□□□ -1.42
TPM1-212ENST00000558347 LRP2P98164 4655 aa6.2□□□□□ -1.42
TPM1-212ENST00000558347 KRTAP13-1Q8IUC0 172 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms