RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 UBE2BP63146 152 aa5.3□□□□□ -1.56
SPG11-209ENST00000558253 C1orf195Q5TG92 126 aa5.3□□□□□ -1.56
SPG11-209ENST00000558253 KRTAP7-1Q8IUC3 87 aa5.3□□□□□ -1.56
SPG11-209ENST00000558253 SPRR4Q96PI1 79 aa5.3□□□□□ -1.56
SPG11-209ENST00000558253 MAST4O15021 2626 aa5.29□□□□□ -1.56
SPG11-209ENST00000558253 TRRAPQ9Y4A5 3859 aa5.29□□□□□ -1.56
SPG11-209ENST00000558253 M0R2N4 97 aa5.29□□□□□ -1.56
SPG11-209ENST00000558253 C1orf137Q5JT78 98 aa5.29□□□□□ -1.56
SPG11-209ENST00000558253 C9orf163Q8N9P6 203 aa5.29□□□□□ -1.56
SPG11-209ENST00000558253 DNAH3Q8TD57 4116 aa5.28□□□□□ -1.56
SPG11-209ENST00000558253 IGLV8-61A0A075B6I0 122 aa5.28□□□□□ -1.56
SPG11-209ENST00000558253 NBDYA0A0U1RRE5 68 aa5.28□□□□□ -1.56
SPG11-209ENST00000558253 Q8NBF4 154 aa5.28□□□□□ -1.56
SPG11-209ENST00000558253 A0A096LNI7 61 aa5.27□□□□□ -1.57
SPG11-209ENST00000558253 BAHCC1Q9P281 2608 aa5.27□□□□□ -1.57
SPG11-209ENST00000558253 SPRR1BP22528 89 aa5.26□□□□□ -1.57
SPG11-209ENST00000558253 SEC61GP60059 68 aa5.26□□□□□ -1.57
SPG11-209ENST00000558253 FP248Q71RG6 208 aaPredicted RBP5.26□□□□□ -1.57
SPG11-209ENST00000558253 KRTAP17-1Q9BYP8 105 aa5.26□□□□□ -1.57
SPG11-209ENST00000558253 KRTAP1-5Q9BYS1 174 aa5.26□□□□□ -1.57
SPG11-209ENST00000558253 STAB1Q9NY15 2570 aa5.25□□□□□ -1.57
SPG11-209ENST00000558253 A0A1W2PNM2 257 aa5.25□□□□□ -1.57
SPG11-209ENST00000558253 LRCOL1A6NCL2 159 aa5.25□□□□□ -1.57
SPG11-209ENST00000558253 PKD1L1Q8TDX9 2849 aa5.25□□□□□ -1.57
SPG11-209ENST00000558253 A0A1W2PNN7 141 aa5.24□□□□□ -1.57
SPG11-209ENST00000558253 IGKV4-1P06312 121 aa5.24□□□□□ -1.57
SPG11-209ENST00000558253 SMIM29Q86T20 159 aa5.24□□□□□ -1.57
SPG11-209ENST00000558253 ST20-AS1Q8NBB2 130 aa5.24□□□□□ -1.57
SPG11-209ENST00000558253 TMEM254Q8TBM7 123 aa5.24□□□□□ -1.57
SPG11-209ENST00000558253 FLNBO75369 2602 aaKnown RBP5.23□□□□□ -1.57
SPG11-209ENST00000558253 IGKV2-24A0A0C4DH68 120 aa5.23□□□□□ -1.57
SPG11-209ENST00000558253 PRR15Q8IV56 129 aa5.23□□□□□ -1.57
SPG11-209ENST00000558253 BRK1Q8WUW1 75 aa5.23□□□□□ -1.57
SPG11-209ENST00000558253 TENM3Q9P273 2699 aa5.23□□□□□ -1.57
SPG11-209ENST00000558253 C3orf84H3BNL1 204 aa5.22□□□□□ -1.57
SPG11-209ENST00000558253 Q6ZRN7 208 aaPredicted RBP5.22□□□□□ -1.57
SPG11-209ENST00000558253 UBE2AP49459 152 aa5.21□□□□□ -1.58
SPG11-209ENST00000558253 RPL37AP61513 92 aaKnown RBP5.21□□□□□ -1.58
SPG11-209ENST00000558253 LINC00476Q8WZB0 136 aa5.21□□□□□ -1.58
SPG11-209ENST00000558253 CMYA5Q8N3K9 4069 aa5.21□□□□□ -1.58
SPG11-209ENST00000558253 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.2□□□□□ -1.58
SPG11-209ENST00000558253 SCXQ7RTU7 201 aa5.2□□□□□ -1.58
SPG11-209ENST00000558253 SNURFQ9Y675 71 aa5.2□□□□□ -1.58
SPG11-209ENST00000558253 COL6A5A8TX70 2615 aa5.19□□□□□ -1.58
SPG11-209ENST00000558253 A0A0U1RQV1 116 aa5.19□□□□□ -1.58
SPG11-209ENST00000558253 IGFL1Q6UW32 110 aa5.19□□□□□ -1.58
SPG11-209ENST00000558253 HIGD2AQ9BW72 106 aa5.19□□□□□ -1.58
SPG11-209ENST00000558253 PRLHP81277 87 aa5.18□□□□□ -1.58
SPG11-209ENST00000558253 Q1T7F1 81 aa5.18□□□□□ -1.58
SPG11-209ENST00000558253 PHF5AQ7RTV0 110 aaKnown RBP5.18□□□□□ -1.58
SPG11-209ENST00000558253 SPACA4Q8TDM5 124 aa5.18□□□□□ -1.58
SPG11-209ENST00000558253 OCR1Q9BZK8 76 aa5.18□□□□□ -1.58
SPG11-209ENST00000558253 ZNF706Q9Y5V0 76 aaPredicted RBP5.18□□□□□ -1.58
SPG11-209ENST00000558253 A0A087WTM6 91 aa5.17□□□□□ -1.58
SPG11-209ENST00000558253 PMAIP1Q13794 54 aa5.17□□□□□ -1.58
SPG11-209ENST00000558253 HUWE1Q7Z6Z7 4374 aaKnown RBP5.16□□□□□ -1.58
SPG11-209ENST00000558253 KRTAP13-1Q8IUC0 172 aa5.16□□□□□ -1.58
SPG11-209ENST00000558253 NOTCH1P46531 2555 aa5.16□□□□□ -1.58
SPG11-209ENST00000558253 LCE6AA0A183 80 aa5.15□□□□□ -1.59
SPG11-209ENST00000558253 KRTAP23-1A1A580 65 aa5.15□□□□□ -1.59
SPG11-209ENST00000558253 NDUFB1O75438 58 aa5.15□□□□□ -1.59
SPG11-209ENST00000558253 CHTF8P0CG12 524 aa5.15□□□□□ -1.59
SPG11-209ENST00000558253 DSCR10P59022 87 aa5.15□□□□□ -1.59
SPG11-209ENST00000558253 Q6ZR54 194 aa5.15□□□□□ -1.59
SPG11-209ENST00000558253 ANK2Q01484 3957 aa5.15□□□□□ -1.59
SPG11-209ENST00000558253 NBEAL1Q6ZS30 2694 aa5.15□□□□□ -1.59
SPG11-209ENST00000558253 HCG22E2RYF7 251 aa5.14□□□□□ -1.59
SPG11-209ENST00000558253 KRTAP5-3Q6L8H2 238 aa5.14□□□□□ -1.59
SPG11-209ENST00000558253 hDV103S1A0JD37 113 aa5.13□□□□□ -1.59
SPG11-209ENST00000558253 CD164Q04900 197 aa5.13□□□□□ -1.59
SPG11-209ENST00000558253 LINC00483Q53H64 154 aa5.13□□□□□ -1.59
SPG11-209ENST00000558253 Q8N9L7 120 aa5.13□□□□□ -1.59
SPG11-209ENST00000558253 CYP4F30PQ9H0H9 118 aa5.13□□□□□ -1.59
SPG11-209ENST00000558253 PLAC8Q9NZF1 115 aa5.13□□□□□ -1.59
SPG11-209ENST00000558253 DNAH1Q9P2D7 4330 aa5.13□□□□□ -1.59
SPG11-209ENST00000558253 A0A087WSZ3 146 aa5.12□□□□□ -1.59
SPG11-209ENST00000558253 RTL8CO15255 209 aa5.12□□□□□ -1.59
SPG11-209ENST00000558253 C1orf134Q5TEV5 83 aa5.12□□□□□ -1.59
SPG11-209ENST00000558253 A8MWP4 228 aa5.11□□□□□ -1.59
SPG11-209ENST00000558253 H3BPC8 53 aa5.11□□□□□ -1.59
SPG11-209ENST00000558253 KRTAP11-1Q8IUC1 163 aa5.11□□□□□ -1.59
SPG11-209ENST00000558253 Q8N1X5 172 aa5.11□□□□□ -1.59
SPG11-209ENST00000558253 MPLKIPQ8TAP9 179 aa5.11□□□□□ -1.59
SPG11-209ENST00000558253 MGAM2Q2M2H8 2515 aa5.11□□□□□ -1.59
SPG11-209ENST00000558253 K7EQZ3 153 aa5.1□□□□□ -1.59
SPG11-209ENST00000558253 IGLV5-52A0A0A0MRZ9 124 aa5.09□□□□□ -1.59
SPG11-209ENST00000558253 LINC00472Q9H8W2 130 aa5.09□□□□□ -1.59
SPG11-209ENST00000558253 DYNC2H1Q8NCM8 4307 aaKnown RBP5.09□□□□□ -1.6
SPG11-209ENST00000558253 ZNF861PO60384 105 aa5.08□□□□□ -1.6
SPG11-209ENST00000558253 MP68P56378 58 aa5.08□□□□□ -1.6
SPG11-209ENST00000558253 PANO1I0J062 215 aa5.07□□□□□ -1.6
SPG11-209ENST00000558253 KRTAP21-3Q3LHN1 58 aa5.07□□□□□ -1.6
SPG11-209ENST00000558253 ZCCHC13Q8WW36 166 aaKnown RBP5.07□□□□□ -1.6
SPG11-209ENST00000558253 LIMD2Q9BT23 127 aa5.07□□□□□ -1.6
SPG11-209ENST00000558253 FAM30AQ9NZY2 134 aa5.07□□□□□ -1.6
SPG11-209ENST00000558253 DNAH9Q9NYC9 4486 aa5.07□□□□□ -1.6
SPG11-209ENST00000558253 KRTAP29-1A8MX34 341 aaPredicted RBP5.06□□□□□ -1.6
SPG11-209ENST00000558253 FAM229BQ4G0N7 80 aa5.06□□□□□ -1.6
SPG11-209ENST00000558253 CASC2Q6XLA1 102 aa5.06□□□□□ -1.6
SPG11-209ENST00000558253 PSORS1C2Q9UIG4 136 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms