RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 PCOTHQ58A44 107 aa2.91□□□□□ -1.94
HNRNPC-233ENST00000557768 TMEM170BQ5T4T1 132 aa2.91□□□□□ -1.94
HNRNPC-233ENST00000557768 FAM19A2Q8N3H0 131 aa2.91□□□□□ -1.94
HNRNPC-233ENST00000557768 KCNQ1DNQ9H478 68 aa2.91□□□□□ -1.94
HNRNPC-233ENST00000557768 TRBV10-3A0A0K0K1G6 114 aa2.9□□□□□ -1.95
HNRNPC-233ENST00000557768 SMIM13P0DJ93 91 aa2.9□□□□□ -1.95
HNRNPC-233ENST00000557768 RPS29P62273 56 aaKnown RBP2.9□□□□□ -1.95
HNRNPC-233ENST00000557768 PMCHL1Q16048 86 aa2.9□□□□□ -1.95
HNRNPC-233ENST00000557768 C1orf195Q5TG92 126 aa2.9□□□□□ -1.95
HNRNPC-233ENST00000557768 SFTA2Q6UW10 78 aa2.9□□□□□ -1.95
HNRNPC-233ENST00000557768 SSBP3-AS1Q7Z2R9 100 aa2.9□□□□□ -1.95
HNRNPC-233ENST00000557768 BAGE3Q86Y29 109 aa2.9□□□□□ -1.95
HNRNPC-233ENST00000557768 TRAPPC1Q9Y5R8 145 aa2.9□□□□□ -1.95
HNRNPC-233ENST00000557768 TRAV9-1A0A075B6T8 112 aa2.89□□□□□ -1.95
HNRNPC-233ENST00000557768 C9orf92A6NGG3 77 aa2.89□□□□□ -1.95
HNRNPC-233ENST00000557768 FABP9Q0Z7S8 132 aa2.89□□□□□ -1.95
HNRNPC-233ENST00000557768 C9orf153Q5TBE3 101 aa2.89□□□□□ -1.95
HNRNPC-233ENST00000557768 Q9BRP9 147 aa2.89□□□□□ -1.95
HNRNPC-233ENST00000557768 COLCA2A8K830 154 aa2.88□□□□□ -1.95
HNRNPC-233ENST00000557768 M0R2T5 61 aa2.88□□□□□ -1.95
HNRNPC-233ENST00000557768 HBDP02042 147 aa2.88□□□□□ -1.95
HNRNPC-233ENST00000557768 MEIG1Q5JSS6 88 aa2.88□□□□□ -1.95
HNRNPC-233ENST00000557768 PRO0461Q9UI25 63 aa2.88□□□□□ -1.95
HNRNPC-233ENST00000557768 A6NED7 52 aa2.87□□□□□ -1.95
HNRNPC-233ENST00000557768 A8MWP4 228 aa2.87□□□□□ -1.95
HNRNPC-233ENST00000557768 S100PP25815 95 aa2.87□□□□□ -1.95
HNRNPC-233ENST00000557768 S100A12P80511 92 aa2.87□□□□□ -1.95
HNRNPC-233ENST00000557768 HRCT1Q6UXD1 115 aa2.87□□□□□ -1.95
HNRNPC-233ENST00000557768 Q6ZRX8 168 aa2.87□□□□□ -1.95
HNRNPC-233ENST00000557768 FLGP20930 4061 aaPredicted RBP2.87□□□□□ -1.95
HNRNPC-233ENST00000557768 DDTP30046 118 aa2.86□□□□□ -1.95
HNRNPC-233ENST00000557768 C18orf32Q8TCD1 76 aa2.86□□□□□ -1.95
HNRNPC-233ENST00000557768 SEC11CQ9BY50 192 aa2.86□□□□□ -1.95
HNRNPC-233ENST00000557768 TMEM218A2RU14 115 aa2.85□□□□□ -1.95
HNRNPC-233ENST00000557768 A8MUU9 505 aa2.85□□□□□ -1.95
HNRNPC-233ENST00000557768 JOSD1Q15040 202 aaPredicted RBP2.85□□□□□ -1.95
HNRNPC-233ENST00000557768 COX6B2Q6YFQ2 88 aa2.85□□□□□ -1.95
HNRNPC-233ENST00000557768 A0A0B4J2C4 111 aa2.84□□□□□ -1.95
HNRNPC-233ENST00000557768 MYMXA0A1B0GTQ4 84 aa2.84□□□□□ -1.95
HNRNPC-233ENST00000557768 IGLV6-57P01721 117 aa2.84□□□□□ -1.95
HNRNPC-233ENST00000557768 TSPEAR-AS2P59090 65 aa2.84□□□□□ -1.95
HNRNPC-233ENST00000557768 S100A7L2Q5SY68 101 aa2.84□□□□□ -1.95
HNRNPC-233ENST00000557768 ADM2Q7Z4H4 148 aa2.84□□□□□ -1.95
HNRNPC-233ENST00000557768 LIMD2Q9BT23 127 aa2.84□□□□□ -1.95
HNRNPC-233ENST00000557768 TRAV23DV6A0A075B6W5 121 aa2.83□□□□□ -1.96
HNRNPC-233ENST00000557768 TRAV12-1A0A0B4J245 112 aa2.83□□□□□ -1.96
HNRNPC-233ENST00000557768 LOC107984156A0A0G2JMH3 177 aa2.83□□□□□ -1.96
HNRNPC-233ENST00000557768 TRBV10-2A0A0K0K1G8 114 aa2.83□□□□□ -1.96
HNRNPC-233ENST00000557768 LINC00587B1AMM8 73 aa2.83□□□□□ -1.96
HNRNPC-233ENST00000557768 H3BQ85 93 aa2.83□□□□□ -1.96
HNRNPC-233ENST00000557768 H7C2G1 150 aa2.83□□□□□ -1.96
HNRNPC-233ENST00000557768 LINC00313P59037 77 aa2.83□□□□□ -1.96
HNRNPC-233ENST00000557768 CLLU1Q5K131 121 aa2.83□□□□□ -1.96
HNRNPC-233ENST00000557768 ARL17AQ8IVW1 177 aa2.83□□□□□ -1.96
HNRNPC-233ENST00000557768 IFI27L1Q96BM0 104 aa2.83□□□□□ -1.96
HNRNPC-233ENST00000557768 SSPOA2VEC9 5147 aa2.83□□□□□ -1.96
HNRNPC-233ENST00000557768 USH2AO75445 5202 aa2.83□□□□□ -1.96
HNRNPC-233ENST00000557768 ZNF73O43830 326 aaPredicted RBP2.82□□□□□ -1.96
HNRNPC-233ENST00000557768 NPC2P61916 151 aa2.82□□□□□ -1.96
HNRNPC-233ENST00000557768 BATFQ16520 125 aa2.82□□□□□ -1.96
HNRNPC-233ENST00000557768 SPINT4Q6UDR6 99 aa2.82□□□□□ -1.96
HNRNPC-233ENST00000557768 MIEN1Q9BRT3 115 aa2.82□□□□□ -1.96
HNRNPC-233ENST00000557768 LEPROTO15243 131 aa2.81□□□□□ -1.96
HNRNPC-233ENST00000557768 SPRR1BP22528 89 aa2.81□□□□□ -1.96
HNRNPC-233ENST00000557768 RPL37P61927 97 aaKnown RBP2.81□□□□□ -1.96
HNRNPC-233ENST00000557768 RHEBQ15382 184 aa2.81□□□□□ -1.96
HNRNPC-233ENST00000557768 SOSTDC1Q6X4U4 206 aa2.81□□□□□ -1.96
HNRNPC-233ENST00000557768 A0A0G2JQZ4 141 aa2.8□□□□□ -1.96
HNRNPC-233ENST00000557768 J3QQQ9 107 aa2.8□□□□□ -1.96
HNRNPC-233ENST00000557768 NDUFC2O95298 119 aa2.8□□□□□ -1.96
HNRNPC-233ENST00000557768 C10orf91Q5T1B1 145 aa2.8□□□□□ -1.96
HNRNPC-233ENST00000557768 DEFB105AQ8NG35 78 aa2.8□□□□□ -1.96
HNRNPC-233ENST00000557768 CHCHD1Q96BP2 118 aaKnown RBP2.8□□□□□ -1.96
HNRNPC-233ENST00000557768 LAMTOR3Q9UHA4 124 aa2.8□□□□□ -1.96
HNRNPC-233ENST00000557768 LGALS3P17931 250 aaKnown RBP2.79□□□□□ -1.96
HNRNPC-233ENST00000557768 HINT1P49773 126 aaPredicted RBP2.79□□□□□ -1.96
HNRNPC-233ENST00000557768 IFITM2Q01629 132 aa2.79□□□□□ -1.96
HNRNPC-233ENST00000557768 Q6Q795 121 aa2.79□□□□□ -1.96
HNRNPC-233ENST00000557768 PMCHL2Q9BQD1 86 aa2.79□□□□□ -1.96
HNRNPC-233ENST00000557768 KRTAP4-3Q9BYR4 195 aa2.79□□□□□ -1.96
HNRNPC-233ENST00000557768 PRO1933Q9H354 126 aa2.79□□□□□ -1.96
HNRNPC-233ENST00000557768 OR13C6PQ8NH95 151 aa2.78□□□□□ -1.96
HNRNPC-233ENST00000557768 FCGBPQ9Y6R7 5405 aaPredicted RBP2.77□□□□□ -1.97
HNRNPC-233ENST00000557768 DPM2O94777 84 aa2.77□□□□□ -1.97
HNRNPC-233ENST00000557768 COX7BP24311 80 aa2.77□□□□□ -1.97
HNRNPC-233ENST00000557768 PLNP26678 52 aa2.77□□□□□ -1.97
HNRNPC-233ENST00000557768 MACF1Q9UPN3 7388 aaKnown RBP2.76□□□□□ -1.97
HNRNPC-233ENST00000557768 TEX49A0A1B0GTD5 131 aa2.76□□□□□ -1.97
HNRNPC-233ENST00000557768 LEPROTL1O95214 131 aa2.76□□□□□ -1.97
HNRNPC-233ENST00000557768 AKR1D1P51857 326 aa2.76□□□□□ -1.97
HNRNPC-233ENST00000557768 ELOF1P60002 83 aaKnown RBP2.76□□□□□ -1.97
HNRNPC-233ENST00000557768 Q5XG85 94 aa2.76□□□□□ -1.97
HNRNPC-233ENST00000557768 LINC00308Q8TCZ7 52 aa2.76□□□□□ -1.97
HNRNPC-233ENST00000557768 SYNE2Q8WXH0 6885 aaKnown RBP2.76□□□□□ -1.97
HNRNPC-233ENST00000557768 IGKCP01834 107 aa2.75□□□□□ -1.97
HNRNPC-233ENST00000557768 APOC3P02656 99 aa2.75□□□□□ -1.97
HNRNPC-233ENST00000557768 FABP4P15090 132 aa2.75□□□□□ -1.97
HNRNPC-233ENST00000557768 PMAIP1Q13794 54 aa2.75□□□□□ -1.97
HNRNPC-233ENST00000557768 SPANXCQ9NY87 97 aa2.75□□□□□ -1.97
HNRNPC-233ENST00000557768 C1orf64Q8NEQ6 169 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms