RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 TCL1BO95988 128 aa3.49□□□□□ -1.85
VPS33B-207ENST00000557470 HIST1H4AP62805 103 aaKnown RBP3.49□□□□□ -1.85
VPS33B-207ENST00000557470 SS18Q15532 418 aa3.49□□□□□ -1.85
VPS33B-207ENST00000557470 C5orf38Q86SI9 138 aa3.49□□□□□ -1.85
VPS33B-207ENST00000557470 ARL17AQ8IVW1 177 aa3.49□□□□□ -1.85
VPS33B-207ENST00000557470 CAMK2N2Q96S95 79 aa3.49□□□□□ -1.85
VPS33B-207ENST00000557470 TP73-AS1Q9UF72 201 aa3.49□□□□□ -1.85
VPS33B-207ENST00000557470 TRBV10-2A0A0K0K1G8 114 aa3.48□□□□□ -1.85
VPS33B-207ENST00000557470 FAM168BA1KXE4 195 aa3.48□□□□□ -1.85
VPS33B-207ENST00000557470 COX7A2LO14548 114 aa3.48□□□□□ -1.85
VPS33B-207ENST00000557470 BCE1O60756 84 aa3.48□□□□□ -1.85
VPS33B-207ENST00000557470 HBDP02042 147 aa3.48□□□□□ -1.85
VPS33B-207ENST00000557470 UBE2D1P51668 147 aa3.48□□□□□ -1.85
VPS33B-207ENST00000557470 OPRPNQ99935 248 aaPredicted RBP3.48□□□□□ -1.85
VPS33B-207ENST00000557470 CNFNQ9BYD5 112 aa3.48□□□□□ -1.85
VPS33B-207ENST00000557470 CDC42SE2Q9NRR3 84 aa3.48□□□□□ -1.85
VPS33B-207ENST00000557470 HIGD1CA8MV81 97 aa3.47□□□□□ -1.85
VPS33B-207ENST00000557470 I3L3M4 83 aa3.47□□□□□ -1.85
VPS33B-207ENST00000557470 FAM104BQ5XKR9 115 aa3.47□□□□□ -1.85
VPS33B-207ENST00000557470 PCP2Q8IVA1 136 aa3.47□□□□□ -1.85
VPS33B-207ENST00000557470 FAM104AQ969W3 186 aa3.47□□□□□ -1.85
VPS33B-207ENST00000557470 DSCR8Q96T75 97 aa3.47□□□□□ -1.85
VPS33B-207ENST00000557470 A0A0B4J2C4 111 aa3.46□□□□□ -1.86
VPS33B-207ENST00000557470 TRBV6-5A0A0K0K1A5 114 aa3.46□□□□□ -1.86
VPS33B-207ENST00000557470 NDUFC1O43677 76 aa3.46□□□□□ -1.86
VPS33B-207ENST00000557470 LGALS3P17931 250 aaKnown RBP3.46□□□□□ -1.86
VPS33B-207ENST00000557470 PLNP26678 52 aa3.46□□□□□ -1.86
VPS33B-207ENST00000557470 SPAG11BQ08648 103 aa3.46□□□□□ -1.86
VPS33B-207ENST00000557470 RNASE13Q5GAN3 156 aaKnown RBP3.46□□□□□ -1.86
VPS33B-207ENST00000557470 ZC2HC1BQ5TFG8 222 aa3.46□□□□□ -1.86
VPS33B-207ENST00000557470 KRTAP7-1Q8IUC3 87 aa3.46□□□□□ -1.86
VPS33B-207ENST00000557470 ZNF706Q9Y5V0 76 aaPredicted RBP3.46□□□□□ -1.86
VPS33B-207ENST00000557470 LINC01549A6NIU2 74 aa3.45□□□□□ -1.86
VPS33B-207ENST00000557470 COX6CP09669 75 aa3.45□□□□□ -1.86
VPS33B-207ENST00000557470 FCER1GP30273 86 aa3.45□□□□□ -1.86
VPS33B-207ENST00000557470 LCE1AQ5T7P2 110 aa3.45□□□□□ -1.86
VPS33B-207ENST00000557470 TRBV27A0A0K0K1C4 114 aa3.44□□□□□ -1.86
VPS33B-207ENST00000557470 A0A1B0GUT8 65 aa3.44□□□□□ -1.86
VPS33B-207ENST00000557470 POLR2KP53803 58 aaKnown RBP3.44□□□□□ -1.86
VPS33B-207ENST00000557470 UBE2BP63146 152 aa3.44□□□□□ -1.86
VPS33B-207ENST00000557470 C2orf82Q6UX34 121 aa3.44□□□□□ -1.86
VPS33B-207ENST00000557470 CAMK2N1Q7Z7J9 78 aa3.44□□□□□ -1.86
VPS33B-207ENST00000557470 MRPL35Q9NZE8 188 aaKnown RBP3.44□□□□□ -1.86
VPS33B-207ENST00000557470 PRO1854Q9UHT4 67 aa3.44□□□□□ -1.86
VPS33B-207ENST00000557470 UBE2D4Q9Y2X8 147 aa3.44□□□□□ -1.86
VPS33B-207ENST00000557470 FSIP2Q5CZC0 6907 aa3.43□□□□□ -1.86
VPS33B-207ENST00000557470 NDUFA1O15239 70 aa3.43□□□□□ -1.86
VPS33B-207ENST00000557470 TLX1NBP0CAT3 122 aa3.43□□□□□ -1.86
VPS33B-207ENST00000557470 IFI27P40305 119 aaPredicted RBP3.43□□□□□ -1.86
VPS33B-207ENST00000557470 UNQ6190/PRO20217Q6UXQ8 127 aa3.43□□□□□ -1.86
VPS33B-207ENST00000557470 DAND5Q8N907 189 aa3.43□□□□□ -1.86
VPS33B-207ENST00000557470 C6orf48Q9UBA6 75 aa3.43□□□□□ -1.86
VPS33B-207ENST00000557470 TRBV30A0A0K0K1B3 111 aa3.42□□□□□ -1.86
VPS33B-207ENST00000557470 LINC01546A6NGU7 62 aa3.42□□□□□ -1.86
VPS33B-207ENST00000557470 ZNF861PO60384 105 aa3.42□□□□□ -1.86
VPS33B-207ENST00000557470 S100A7L2Q5SY68 101 aa3.42□□□□□ -1.86
VPS33B-207ENST00000557470 Q8N377 158 aa3.42□□□□□ -1.86
VPS33B-207ENST00000557470 Q8N9P0 234 aaPredicted RBP3.42□□□□□ -1.86
VPS33B-207ENST00000557470 LITAFQ99732 161 aa3.42□□□□□ -1.86
VPS33B-207ENST00000557470 RETNLBQ9BQ08 111 aa3.42□□□□□ -1.86
VPS33B-207ENST00000557470 TEX49A0A1B0GTD5 131 aa3.41□□□□□ -1.86
VPS33B-207ENST00000557470 MRPL51Q4U2R6 128 aaKnown RBP3.41□□□□□ -1.86
VPS33B-207ENST00000557470 C9orf129Q5T035 196 aaKnown RBP3.41□□□□□ -1.86
VPS33B-207ENST00000557470 ATP5EP2Q5VTU8 51 aa3.41□□□□□ -1.86
VPS33B-207ENST00000557470 Q6JHZ5 121 aa3.41□□□□□ -1.86
VPS33B-207ENST00000557470 KTN1-AS1Q86SY8 53 aa3.41□□□□□ -1.86
VPS33B-207ENST00000557470 ORMDL3Q8N138 153 aa3.41□□□□□ -1.86
VPS33B-207ENST00000557470 CRCT1Q9UGL9 99 aa3.41□□□□□ -1.86
VPS33B-207ENST00000557470 TRAV12-1A0A0B4J245 112 aa3.4□□□□□ -1.87
VPS33B-207ENST00000557470 TIMM17BO60830 172 aa3.4□□□□□ -1.87
VPS33B-207ENST00000557470 CFC1BP0CG36 223 aa3.4□□□□□ -1.87
VPS33B-207ENST00000557470 CFC1P0CG37 223 aa3.4□□□□□ -1.87
VPS33B-207ENST00000557470 CKS2P33552 79 aa3.4□□□□□ -1.87
VPS33B-207ENST00000557470 LINC00313P59037 77 aa3.4□□□□□ -1.87
VPS33B-207ENST00000557470 TPRXLQ17RH7 258 aa3.4□□□□□ -1.87
VPS33B-207ENST00000557470 Q8N8P6 123 aa3.4□□□□□ -1.87
VPS33B-207ENST00000557470 TYMSOSQ8TAI1 123 aa3.4□□□□□ -1.87
VPS33B-207ENST00000557470 TIMM21Q9BVV7 248 aa3.4□□□□□ -1.87
VPS33B-207ENST00000557470 IGKV2D-26A0A0A0MRZ7 120 aa3.39□□□□□ -1.87
VPS33B-207ENST00000557470 KRTAP16-1A8MUX0 517 aa3.39□□□□□ -1.87
VPS33B-207ENST00000557470 D6R8Y8 96 aa3.39□□□□□ -1.87
VPS33B-207ENST00000557470 UBE2AP49459 152 aa3.39□□□□□ -1.87
VPS33B-207ENST00000557470 RPL39P62891 51 aaKnown RBP3.39□□□□□ -1.87
VPS33B-207ENST00000557470 KRTAP13-2Q52LG2 175 aa3.39□□□□□ -1.87
VPS33B-207ENST00000557470 SND1-IT1Q9HBX3 110 aa3.39□□□□□ -1.87
VPS33B-207ENST00000557470 ANAPC11Q9NYG5 84 aa3.39□□□□□ -1.87
VPS33B-207ENST00000557470 A0A096LNJ9 63 aa3.38□□□□□ -1.87
VPS33B-207ENST00000557470 CCKP06307 115 aa3.38□□□□□ -1.87
VPS33B-207ENST00000557470 RBM3P98179 157 aaKnown RBP3.38□□□□□ -1.87
VPS33B-207ENST00000557470 FP248Q71RG6 208 aaPredicted RBP3.38□□□□□ -1.87
VPS33B-207ENST00000557470 C22orf24Q9Y442 160 aa3.38□□□□□ -1.87
VPS33B-207ENST00000557470 MUC17Q685J3 4493 aa3.38□□□□□ -1.87
VPS33B-207ENST00000557470 ZNF815PA8K554 130 aa3.37□□□□□ -1.87
VPS33B-207ENST00000557470 F8VRH5 84 aa3.37□□□□□ -1.87
VPS33B-207ENST00000557470 K7EMI3 77 aa3.37□□□□□ -1.87
VPS33B-207ENST00000557470 LST1O00453 97 aa3.37□□□□□ -1.87
VPS33B-207ENST00000557470 PPP1R17O96001 155 aa3.37□□□□□ -1.87
VPS33B-207ENST00000557470 RPL28P46779 137 aaKnown RBP3.37□□□□□ -1.87
VPS33B-207ENST00000557470 KLKP1Q107X0 134 aa3.37□□□□□ -1.87
VPS33B-207ENST00000557470 Q1RN00 199 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms