RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 HIGD2AQ9BW72 106 aa14.15□□□□□ -0.14
RCCD1-208ENST00000557266 IGFL1Q6UW32 110 aa14.15□□□□□ -0.14
RCCD1-208ENST00000557266 DSCR10P59022 87 aa14.14□□□□□ -0.15
RCCD1-208ENST00000557266 PHF5AQ7RTV0 110 aaKnown RBP14.14□□□□□ -0.15
RCCD1-208ENST00000557266 LRCOL1A6NCL2 159 aa14.11□□□□□ -0.15
RCCD1-208ENST00000557266 IGLV8-61A0A075B6I0 122 aa14.11□□□□□ -0.15
RCCD1-208ENST00000557266 NDUFC1O43677 76 aa14.11□□□□□ -0.15
RCCD1-208ENST00000557266 C9orf163Q8N9P6 203 aa14.09□□□□□ -0.15
RCCD1-208ENST00000557266 K7EQZ3 153 aa14.09□□□□□ -0.15
RCCD1-208ENST00000557266 EPM2AB3EWF7 344 aa14.08□□□□□ -0.16
RCCD1-208ENST00000557266 NBDYA0A0U1RRE5 68 aa14.07□□□□□ -0.16
RCCD1-208ENST00000557266 A0A0U1RQV1 116 aa14.06□□□□□ -0.16
RCCD1-208ENST00000557266 SERP1Q9Y6X1 66 aa14.05□□□□□ -0.16
RCCD1-208ENST00000557266 H0Y9J4 135 aa14.05□□□□□ -0.16
RCCD1-208ENST00000557266 UBE2AP49459 152 aa14.05□□□□□ -0.16
RCCD1-208ENST00000557266 Q6ZRN7 208 aaPredicted RBP14.05□□□□□ -0.16
RCCD1-208ENST00000557266 FAM30AQ9NZY2 134 aa14.04□□□□□ -0.16
RCCD1-208ENST00000557266 SRRM2Q9UQ35 2752 aaKnown RBP14.03□□□□□ -0.16
RCCD1-208ENST00000557266 FBN3Q75N90 2809 aa14.02□□□□□ -0.17
RCCD1-208ENST00000557266 PANO1I0J062 215 aa14.02□□□□□ -0.17
RCCD1-208ENST00000557266 A0A087WSZ3 146 aa14.01□□□□□ -0.17
RCCD1-208ENST00000557266 NUPR2A6NF83 97 aa14.01□□□□□ -0.17
RCCD1-208ENST00000557266 SPRR1BP22528 89 aa14□□□□□ -0.17
RCCD1-208ENST00000557266 Q5XG85 94 aa13.99□□□□□ -0.17
RCCD1-208ENST00000557266 DEFB116Q30KQ4 102 aa13.99□□□□□ -0.17
RCCD1-208ENST00000557266 PKIGQ9Y2B9 76 aa13.98□□□□□ -0.17
RCCD1-208ENST00000557266 LCE6AA0A183 80 aa13.97□□□□□ -0.17
RCCD1-208ENST00000557266 LINC00474Q9P2X8 69 aa13.97□□□□□ -0.17
RCCD1-208ENST00000557266 STARD9Q9P2P6 4700 aa13.96□□□□□ -0.18
RCCD1-208ENST00000557266 ATP5EP56381 51 aaPredicted RBP13.96□□□□□ -0.18
RCCD1-208ENST00000557266 HCG22E2RYF7 251 aa13.95□□□□□ -0.18
RCCD1-208ENST00000557266 VPS13DQ5THJ4 4388 aa13.94□□□□□ -0.18
RCCD1-208ENST00000557266 KRTAP13-1Q8IUC0 172 aa13.92□□□□□ -0.18
RCCD1-208ENST00000557266 C4orf26Q17RF5 130 aa13.91□□□□□ -0.18
RCCD1-208ENST00000557266 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.89□□□□□ -0.19
RCCD1-208ENST00000557266 SPACA4Q8TDM5 124 aa13.88□□□□□ -0.19
RCCD1-208ENST00000557266 RPL37AP61513 92 aaKnown RBP13.87□□□□□ -0.19
RCCD1-208ENST00000557266 HECTD4Q9Y4D8 3996 aa13.85□□□□□ -0.19
RCCD1-208ENST00000557266 WFDC13Q8IUB5 93 aa13.84□□□□□ -0.19
RCCD1-208ENST00000557266 ZCCHC13Q8WW36 166 aaKnown RBP13.84□□□□□ -0.19
RCCD1-208ENST00000557266 TGP01266 2768 aa13.83□□□□□ -0.2
RCCD1-208ENST00000557266 A0A087WTM6 91 aa13.82□□□□□ -0.2
RCCD1-208ENST00000557266 HRCT1Q6UXD1 115 aa13.81□□□□□ -0.2
RCCD1-208ENST00000557266 LINC00472Q9H8W2 130 aa13.81□□□□□ -0.2
RCCD1-208ENST00000557266 C5orf47Q569G3 176 aa13.8□□□□□ -0.2
RCCD1-208ENST00000557266 SMIM26A0A096LP01 95 aa13.79□□□□□ -0.2
RCCD1-208ENST00000557266 FP248Q71RG6 208 aaPredicted RBP13.79□□□□□ -0.2
RCCD1-208ENST00000557266 KRTAP29-1A8MX34 341 aaPredicted RBP13.79□□□□□ -0.2
RCCD1-208ENST00000557266 PRR15Q8IV56 129 aa13.78□□□□□ -0.2
RCCD1-208ENST00000557266 DNAH2Q9P225 4427 aa13.76□□□□□ -0.21
RCCD1-208ENST00000557266 KMT2AQ03164 3969 aa13.76□□□□□ -0.21
RCCD1-208ENST00000557266 A8MWP4 228 aa13.75□□□□□ -0.21
RCCD1-208ENST00000557266 WWC2-AS2Q96NR7 200 aa13.75□□□□□ -0.21
RCCD1-208ENST00000557266 RTL8CO15255 209 aa13.72□□□□□ -0.21
RCCD1-208ENST00000557266 FAM229BQ4G0N7 80 aa13.72□□□□□ -0.21
RCCD1-208ENST00000557266 IGLV9-49A0A0B4J1Y8 123 aa13.71□□□□□ -0.21
RCCD1-208ENST00000557266 CASC2Q6XLA1 102 aa13.71□□□□□ -0.21
RCCD1-208ENST00000557266 Q6ZR54 194 aa13.7□□□□□ -0.22
RCCD1-208ENST00000557266 DNAH17Q9UFH2 4485 aa13.7□□□□□ -0.22
RCCD1-208ENST00000557266 LINC00483Q53H64 154 aa13.7□□□□□ -0.22
RCCD1-208ENST00000557266 PSORS1C2Q9UIG4 136 aa13.67□□□□□ -0.22
RCCD1-208ENST00000557266 IGLV5-52A0A0A0MRZ9 124 aa13.66□□□□□ -0.22
RCCD1-208ENST00000557266 FRAS1Q86XX4 4008 aa13.65□□□□□ -0.22
RCCD1-208ENST00000557266 MP68P56378 58 aa13.64□□□□□ -0.23
RCCD1-208ENST00000557266 PLAC8Q9NZF1 115 aa13.64□□□□□ -0.23
RCCD1-208ENST00000557266 DNAH8Q96JB1 4490 aa13.63□□□□□ -0.23
RCCD1-208ENST00000557266 Q96NJ1 140 aa13.63□□□□□ -0.23
RCCD1-208ENST00000557266 MMP24-AS1A0A0U1RRL7 71 aa13.61□□□□□ -0.23
RCCD1-208ENST00000557266 ZNF706Q9Y5V0 76 aaPredicted RBP13.61□□□□□ -0.23
RCCD1-208ENST00000557266 hDV103S1A0JD37 113 aa13.6□□□□□ -0.23
RCCD1-208ENST00000557266 TRAV22A0A0B4J277 110 aa13.59□□□□□ -0.23
RCCD1-208ENST00000557266 LINC00208Q96KT6 92 aa13.59□□□□□ -0.23
RCCD1-208ENST00000557266 MOBPQ13875 183 aa13.58□□□□□ -0.24
RCCD1-208ENST00000557266 H0Y9P7 68 aa13.57□□□□□ -0.24
RCCD1-208ENST00000557266 C1orf64Q8NEQ6 169 aa13.57□□□□□ -0.24
RCCD1-208ENST00000557266 ZNF861PO60384 105 aa13.57□□□□□ -0.24
RCCD1-208ENST00000557266 NDUFB1O75438 58 aa13.57□□□□□ -0.24
RCCD1-208ENST00000557266 ANAPC11Q9NYG5 84 aa13.57□□□□□ -0.24
RCCD1-208ENST00000557266 PRR4Q16378 134 aa13.54□□□□□ -0.24
RCCD1-208ENST00000557266 CYP4F30PQ9H0H9 118 aa13.54□□□□□ -0.24
RCCD1-208ENST00000557266 C1orf134Q5TEV5 83 aa13.54□□□□□ -0.24
RCCD1-208ENST00000557266 MPLKIPQ8TAP9 179 aa13.54□□□□□ -0.24
RCCD1-208ENST00000557266 H3BPC8 53 aa13.52□□□□□ -0.25
RCCD1-208ENST00000557266 LY6G6CO95867 125 aa13.52□□□□□ -0.25
RCCD1-208ENST00000557266 ASB16-AS1Q495Z4 193 aa13.49□□□□□ -0.25
RCCD1-208ENST00000557266 LINC00336Q6ZUF6 198 aa13.49□□□□□ -0.25
RCCD1-208ENST00000557266 DNAH6Q9C0G6 4158 aa13.49□□□□□ -0.25
RCCD1-208ENST00000557266 ALMS1Q8TCU4 4167 aa13.48□□□□□ -0.25
RCCD1-208ENST00000557266 C8orf17Q9NRJ1 99 aa13.45□□□□□ -0.26
RCCD1-208ENST00000557266 IGLV7-43P04211 117 aa13.42□□□□□ -0.26
RCCD1-208ENST00000557266 A0A1B0GVX0 72 aa13.42□□□□□ -0.26
RCCD1-208ENST00000557266 SPANXA2-OT1Q8N9U9 137 aa13.41□□□□□ -0.26
RCCD1-208ENST00000557266 IGHV6-1A0A0B4J1U7 121 aa13.4□□□□□ -0.26
RCCD1-208ENST00000557266 DNAH5Q8TE73 4624 aa13.39□□□□□ -0.27
RCCD1-208ENST00000557266 DNAH11Q96DT5 4516 aa13.39□□□□□ -0.27
RCCD1-208ENST00000557266 TP53AIP1Q9HCN2 124 aa13.37□□□□□ -0.27
RCCD1-208ENST00000557266 CDK2AP2O75956 126 aa13.35□□□□□ -0.27
RCCD1-208ENST00000557266 Q1T7F1 81 aa13.34□□□□□ -0.27
RCCD1-208ENST00000557266 KRTAP10-2P60368 255 aa13.33□□□□□ -0.28
RCCD1-208ENST00000557266 A0A087X002 238 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms