RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 MT1BP07438 61 aa5.76□□□□□ -1.49
PSEN1-220ENST00000557037 CLEC2BQ92478 149 aa5.76□□□□□ -1.49
PSEN1-220ENST00000557037 SPANXDQ9BXN6 97 aa5.76□□□□□ -1.49
PSEN1-220ENST00000557037 LINC00518Q8N0U6 118 aa5.75□□□□□ -1.49
PSEN1-220ENST00000557037 SPANXCQ9NY87 97 aa5.75□□□□□ -1.49
PSEN1-220ENST00000557037 Q6JHZ5 121 aa5.74□□□□□ -1.49
PSEN1-220ENST00000557037 IFI27L1Q96BM0 104 aa5.74□□□□□ -1.49
PSEN1-220ENST00000557037 C18orf32Q8TCD1 76 aa5.73□□□□□ -1.49
PSEN1-220ENST00000557037 SEC11CQ9BY50 192 aa5.73□□□□□ -1.49
PSEN1-220ENST00000557037 TRBV7-6A0A0J9YX20 115 aa5.72□□□□□ -1.49
PSEN1-220ENST00000557037 A0A0J9YXY3 114 aa5.71□□□□□ -1.5
PSEN1-220ENST00000557037 A0A1B0GWB2 263 aa5.71□□□□□ -1.5
PSEN1-220ENST00000557037 NMUP48645 174 aa5.71□□□□□ -1.5
PSEN1-220ENST00000557037 LINC00308Q8TCZ7 52 aa5.71□□□□□ -1.5
PSEN1-220ENST00000557037 H0Y8G0 127 aa5.7□□□□□ -1.5
PSEN1-220ENST00000557037 C9orf118A6NHY6 69 aa5.69□□□□□ -1.5
PSEN1-220ENST00000557037 SPRR2DP22532 72 aa5.69□□□□□ -1.5
PSEN1-220ENST00000557037 Q5VV11 94 aa5.69□□□□□ -1.5
PSEN1-220ENST00000557037 OCIAD2Q56VL3 154 aa5.67□□□□□ -1.5
PSEN1-220ENST00000557037 LCE1AQ5T7P2 110 aa5.67□□□□□ -1.5
PSEN1-220ENST00000557037 SLC7A5P1Q8MH63 180 aa5.67□□□□□ -1.5
PSEN1-220ENST00000557037 A0A1W2PNM2 257 aa5.66□□□□□ -1.5
PSEN1-220ENST00000557037 LINC00313P59037 77 aa5.66□□□□□ -1.5
PSEN1-220ENST00000557037 KRTAP19-4Q3LI73 84 aa5.66□□□□□ -1.5
PSEN1-220ENST00000557037 TRAV13-2A0A0B4J235 113 aa5.65□□□□□ -1.5
PSEN1-220ENST00000557037 COLCA2A8K830 154 aa5.64□□□□□ -1.51
PSEN1-220ENST00000557037 S100PP25815 95 aa5.64□□□□□ -1.51
PSEN1-220ENST00000557037 SPINK7P58062 85 aa5.64□□□□□ -1.51
PSEN1-220ENST00000557037 HERVK_113P61574 105 aa5.64□□□□□ -1.51
PSEN1-220ENST00000557037 COX19Q49B96 90 aa5.64□□□□□ -1.51
PSEN1-220ENST00000557037 LITAFQ99732 161 aa5.64□□□□□ -1.51
PSEN1-220ENST00000557037 SS18L2Q9UHA2 77 aa5.64□□□□□ -1.51
PSEN1-220ENST00000557037 ZNF815PA8K554 130 aa5.63□□□□□ -1.51
PSEN1-220ENST00000557037 SIGMAR1Q99720 223 aa5.63□□□□□ -1.51
PSEN1-220ENST00000557037 NHP2Q9NX24 153 aaKnown RBP5.63□□□□□ -1.51
PSEN1-220ENST00000557037 H3BUT2 72 aa5.62□□□□□ -1.51
PSEN1-220ENST00000557037 SERF1AO75920 110 aa5.61□□□□□ -1.51
PSEN1-220ENST00000557037 WFDC13Q8IUB5 93 aa5.61□□□□□ -1.51
PSEN1-220ENST00000557037 FAM218AQ96MZ4 157 aa5.61□□□□□ -1.51
PSEN1-220ENST00000557037 A4D1N5 150 aa5.6□□□□□ -1.51
PSEN1-220ENST00000557037 KRTAP19-8Q3LI54 63 aa5.6□□□□□ -1.51
PSEN1-220ENST00000557037 PMCHL2Q9BQD1 86 aa5.6□□□□□ -1.51
PSEN1-220ENST00000557037 TRAPPC1Q9Y5R8 145 aa5.6□□□□□ -1.51
PSEN1-220ENST00000557037 A6NDN8 102 aa5.59□□□□□ -1.51
PSEN1-220ENST00000557037 PLNP26678 52 aa5.59□□□□□ -1.51
PSEN1-220ENST00000557037 LCE3BQ5TA77 95 aa5.59□□□□□ -1.51
PSEN1-220ENST00000557037 Q6ZQY7 126 aa5.58□□□□□ -1.52
PSEN1-220ENST00000557037 DPM2O94777 84 aa5.57□□□□□ -1.52
PSEN1-220ENST00000557037 A0A087WSZ3 146 aa5.56□□□□□ -1.52
PSEN1-220ENST00000557037 TIMM17BO60830 172 aa5.55□□□□□ -1.52
PSEN1-220ENST00000557037 CHCHD1Q96BP2 118 aaKnown RBP5.55□□□□□ -1.52
PSEN1-220ENST00000557037 IMUPQ9GZP8 106 aa5.55□□□□□ -1.52
PSEN1-220ENST00000557037 IGKCP01834 107 aa5.54□□□□□ -1.52
PSEN1-220ENST00000557037 SMIM11BQ8TCY0 68 aa5.53□□□□□ -1.52
PSEN1-220ENST00000557037 ZCCHC13Q8WW36 166 aaKnown RBP5.53□□□□□ -1.52
PSEN1-220ENST00000557037 FAM236AA0A1B0GUQ0 79 aa5.52□□□□□ -1.53
PSEN1-220ENST00000557037 FAM236BA0A1B0GV22 79 aa5.52□□□□□ -1.53
PSEN1-220ENST00000557037 LINC00575Q6W349 94 aa5.52□□□□□ -1.53
PSEN1-220ENST00000557037 SNHG12Q9BXW3 62 aa5.52□□□□□ -1.53
PSEN1-220ENST00000557037 KRTAP4-8Q9BYQ9 185 aa5.52□□□□□ -1.53
PSEN1-220ENST00000557037 E9PLD3 99 aa5.51□□□□□ -1.53
PSEN1-220ENST00000557037 IGKV4-1P06312 121 aa5.51□□□□□ -1.53
PSEN1-220ENST00000557037 H1FX-AS1Q4G0G2 97 aa5.51□□□□□ -1.53
PSEN1-220ENST00000557037 DSTQ03001 7570 aaKnown RBP5.5□□□□□ -1.53
PSEN1-220ENST00000557037 hADV29S1A0JD25 119 aa5.5□□□□□ -1.53
PSEN1-220ENST00000557037 TEN1Q86WV5 123 aa5.5□□□□□ -1.53
PSEN1-220ENST00000557037 KRTAP8-1Q8IUC2 63 aa5.5□□□□□ -1.53
PSEN1-220ENST00000557037 SPRR2GQ9BYE4 73 aa5.5□□□□□ -1.53
PSEN1-220ENST00000557037 IGHV6-1A0A0B4J1U7 121 aa5.49□□□□□ -1.53
PSEN1-220ENST00000557037 HSBP1O75506 76 aa5.49□□□□□ -1.53
PSEN1-220ENST00000557037 SCGB1D1O95968 90 aa5.48□□□□□ -1.53
PSEN1-220ENST00000557037 LEPROTL1O95214 131 aa5.47□□□□□ -1.53
PSEN1-220ENST00000557037 VAMP3Q15836 100 aa5.47□□□□□ -1.53
PSEN1-220ENST00000557037 TTTY13Q9BZ97 58 aa5.47□□□□□ -1.53
PSEN1-220ENST00000557037 HSPB8Q9UJY1 196 aa5.47□□□□□ -1.53
PSEN1-220ENST00000557037 DEFB116Q30KQ4 102 aa5.46□□□□□ -1.54
PSEN1-220ENST00000557037 KRTAP4-9Q9BYQ8 210 aa5.46□□□□□ -1.54
PSEN1-220ENST00000557037 FABP4P15090 132 aa5.44□□□□□ -1.54
PSEN1-220ENST00000557037 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.43□□□□□ -1.54
PSEN1-220ENST00000557037 TMEM218A2RU14 115 aa5.42□□□□□ -1.54
PSEN1-220ENST00000557037 KRTAP4-12Q9BQ66 201 aa5.42□□□□□ -1.54
PSEN1-220ENST00000557037 PPDPFLQ8WWR9 84 aa5.41□□□□□ -1.54
PSEN1-220ENST00000557037 MUSTN1Q8IVN3 82 aa5.4□□□□□ -1.54
PSEN1-220ENST00000557037 IFITM1P13164 125 aa5.38□□□□□ -1.55
PSEN1-220ENST00000557037 COPS9Q8WXC6 57 aa5.38□□□□□ -1.55
PSEN1-220ENST00000557037 HMCN1Q96RW7 5635 aa5.38□□□□□ -1.55
PSEN1-220ENST00000557037 C3orf79P0CE67 100 aa5.37□□□□□ -1.55
PSEN1-220ENST00000557037 SCGB1D4Q6XE38 83 aa5.36□□□□□ -1.55
PSEN1-220ENST00000557037 AHNAK2Q8IVF2 5795 aa5.36□□□□□ -1.55
PSEN1-220ENST00000557037 C5orf47Q569G3 176 aa5.35□□□□□ -1.55
PSEN1-220ENST00000557037 C8orf87E5RJ46 101 aa5.34□□□□□ -1.55
PSEN1-220ENST00000557037 NDUFV3P56181 108 aaKnown RBP5.34□□□□□ -1.55
PSEN1-220ENST00000557037 LYRM7Q5U5X0 104 aa5.34□□□□□ -1.55
PSEN1-220ENST00000557037 A0A1B0GVX0 72 aa5.33□□□□□ -1.56
PSEN1-220ENST00000557037 LINC00472Q9H8W2 130 aa5.33□□□□□ -1.56
PSEN1-220ENST00000557037 KRTAP23-1A1A580 65 aa5.31□□□□□ -1.56
PSEN1-220ENST00000557037 H3BMG7 143 aa5.31□□□□□ -1.56
PSEN1-220ENST00000557037 UQCC3Q6UW78 93 aa5.31□□□□□ -1.56
PSEN1-220ENST00000557037 C12orf57Q99622 126 aa5.31□□□□□ -1.56
PSEN1-220ENST00000557037 RAB37Q96AX2 223 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 160.4 ms