RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 CFC1BP0CG36 223 aa12.55□□□□□ -0.4
PABPN1-207ENST00000556821 CFC1P0CG37 223 aa12.55□□□□□ -0.4
PABPN1-207ENST00000556821 H7C2G1 150 aa12.53□□□□□ -0.4
PABPN1-207ENST00000556821 PYY3Q5JQD4 70 aa12.52□□□□□ -0.41
PABPN1-207ENST00000556821 BVES-AS1Q5T3Y7 98 aa12.52□□□□□ -0.41
PABPN1-207ENST00000556821 A0A0B4J2C4 111 aa12.5□□□□□ -0.41
PABPN1-207ENST00000556821 ASB16-AS1Q495Z4 193 aa12.49□□□□□ -0.41
PABPN1-207ENST00000556821 Q5XG85 94 aa12.49□□□□□ -0.41
PABPN1-207ENST00000556821 RAB37Q96AX2 223 aa12.48□□□□□ -0.41
PABPN1-207ENST00000556821 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.47□□□□□ -0.41
PABPN1-207ENST00000556821 CEND1Q8N111 149 aa12.47□□□□□ -0.41
PABPN1-207ENST00000556821 XP32Q5T750 250 aa12.46□□□□□ -0.41
PABPN1-207ENST00000556821 F8WEM9 126 aa12.45□□□□□ -0.42
PABPN1-207ENST00000556821 TMA7Q9Y2S6 64 aaKnown RBP12.45□□□□□ -0.42
PABPN1-207ENST00000556821 FXYD2P54710 66 aa12.44□□□□□ -0.42
PABPN1-207ENST00000556821 IGLV8-61A0A075B6I0 122 aa12.43□□□□□ -0.42
PABPN1-207ENST00000556821 C1orf195Q5TG92 126 aa12.41□□□□□ -0.42
PABPN1-207ENST00000556821 FAM218AQ96MZ4 157 aa12.41□□□□□ -0.42
PABPN1-207ENST00000556821 SEC61BP60468 96 aaKnown RBP12.4□□□□□ -0.42
PABPN1-207ENST00000556821 PPDPFLQ8WWR9 84 aa12.4□□□□□ -0.42
PABPN1-207ENST00000556821 KRTAP4-1Q9BYQ7 146 aa12.4□□□□□ -0.42
PABPN1-207ENST00000556821 IGFL1Q6UW32 110 aa12.39□□□□□ -0.43
PABPN1-207ENST00000556821 PRO1854Q9UHT4 67 aa12.39□□□□□ -0.43
PABPN1-207ENST00000556821 TMEM238LA0A1B0GVL6 79 aa12.38□□□□□ -0.43
PABPN1-207ENST00000556821 A6NJY4 79 aa12.38□□□□□ -0.43
PABPN1-207ENST00000556821 OCIAD2Q56VL3 154 aa12.38□□□□□ -0.43
PABPN1-207ENST00000556821 Q6JHZ5 121 aa12.38□□□□□ -0.43
PABPN1-207ENST00000556821 CLEC2BQ92478 149 aa12.38□□□□□ -0.43
PABPN1-207ENST00000556821 H0YGX0 51 aa12.37□□□□□ -0.43
PABPN1-207ENST00000556821 C9orf92A6NGG3 77 aa12.36□□□□□ -0.43
PABPN1-207ENST00000556821 HSD52Q0P140 79 aa12.34□□□□□ -0.43
PABPN1-207ENST00000556821 SNHG12Q9BXW3 62 aa12.33□□□□□ -0.44
PABPN1-207ENST00000556821 TRBV7-7A0A0K0K1E9 115 aa12.32□□□□□ -0.44
PABPN1-207ENST00000556821 H3BUT2 72 aa12.32□□□□□ -0.44
PABPN1-207ENST00000556821 TCL1BO95988 128 aa12.31□□□□□ -0.44
PABPN1-207ENST00000556821 TRIAP1O43715 76 aa12.3□□□□□ -0.44
PABPN1-207ENST00000556821 K7ERJ3 54 aa12.28□□□□□ -0.44
PABPN1-207ENST00000556821 UQCR10Q9UDW1 63 aa12.28□□□□□ -0.44
PABPN1-207ENST00000556821 A0A1B0GX51 115 aa12.27□□□□□ -0.45
PABPN1-207ENST00000556821 SNCGO76070 127 aa12.27□□□□□ -0.45
PABPN1-207ENST00000556821 NDUFV3P56181 108 aaKnown RBP12.25□□□□□ -0.45
PABPN1-207ENST00000556821 PCOTHQ58A44 107 aa12.22□□□□□ -0.45
PABPN1-207ENST00000556821 Q6Q795 121 aa12.19□□□□□ -0.46
PABPN1-207ENST00000556821 PSMB2P49721 201 aa12.17□□□□□ -0.46
PABPN1-207ENST00000556821 H3BMG7 143 aa12.16□□□□□ -0.46
PABPN1-207ENST00000556821 FABP2P12104 132 aa12.16□□□□□ -0.46
PABPN1-207ENST00000556821 GHRHP01286 108 aa12.15□□□□□ -0.46
PABPN1-207ENST00000556821 RPL37P61927 97 aaKnown RBP12.14□□□□□ -0.47
PABPN1-207ENST00000556821 TEN1Q86WV5 123 aa12.14□□□□□ -0.47
PABPN1-207ENST00000556821 LST1O00453 97 aa12.11□□□□□ -0.47
PABPN1-207ENST00000556821 DNAL4O96015 105 aa12.11□□□□□ -0.47
PABPN1-207ENST00000556821 ORMDL1Q9P0S3 153 aa12.11□□□□□ -0.47
PABPN1-207ENST00000556821 COX6CP09669 75 aa12.1□□□□□ -0.47
PABPN1-207ENST00000556821 LCE2CQ5TA81 110 aa12.1□□□□□ -0.47
PABPN1-207ENST00000556821 SS18L2Q9UHA2 77 aa12.1□□□□□ -0.47
PABPN1-207ENST00000556821 A0A087WSZ3 146 aa12.08□□□□□ -0.48
PABPN1-207ENST00000556821 A0A1W2PNM2 257 aa12.08□□□□□ -0.48
PABPN1-207ENST00000556821 KRTAP19-2Q3LHN2 52 aa12.08□□□□□ -0.48
PABPN1-207ENST00000556821 Q96NJ1 140 aa12.05□□□□□ -0.48
PABPN1-207ENST00000556821 A0A1B0GV72 72 aa12.03□□□□□ -0.48
PABPN1-207ENST00000556821 H3BQ85 93 aa12.03□□□□□ -0.48
PABPN1-207ENST00000556821 OBSCN-AS1Q96MR7 158 aa12.03□□□□□ -0.48
PABPN1-207ENST00000556821 TMEM256-PLSCR3K7ERE1 68 aa12.02□□□□□ -0.49
PABPN1-207ENST00000556821 TRACP01848 142 aa12.02□□□□□ -0.49
PABPN1-207ENST00000556821 SMIM6P0DI80 62 aa12.01□□□□□ -0.49
PABPN1-207ENST00000556821 KRTAP9-7A8MTY7 169 aa12□□□□□ -0.49
PABPN1-207ENST00000556821 ANKRD29Q8N6D5 301 aa11.99□□□□□ -0.49
PABPN1-207ENST00000556821 SCGB1C2P0DMR2 95 aa11.97□□□□□ -0.49
PABPN1-207ENST00000556821 UBE2V1Q13404 147 aa11.97□□□□□ -0.49
PABPN1-207ENST00000556821 TRBV7-4A0A0J9YYF1 115 aa11.96□□□□□ -0.49
PABPN1-207ENST00000556821 M0R143 59 aa11.95□□□□□ -0.5
PABPN1-207ENST00000556821 Q75L30 129 aa11.95□□□□□ -0.5
PABPN1-207ENST00000556821 MT1HP80294 61 aa11.94□□□□□ -0.5
PABPN1-207ENST00000556821 LORP23490 312 aaPredicted RBP11.92□□□□□ -0.5
PABPN1-207ENST00000556821 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.91□□□□□ -0.5
PABPN1-207ENST00000556821 NAA38Q9BRA0 125 aaKnown RBP11.91□□□□□ -0.5
PABPN1-207ENST00000556821 CCKP06307 115 aa11.9□□□□□ -0.5
PABPN1-207ENST00000556821 SIGMAR1Q99720 223 aa11.88□□□□□ -0.51
PABPN1-207ENST00000556821 C20orf166-AS1Q96NR2 134 aa11.87□□□□□ -0.51
PABPN1-207ENST00000556821 BAALC-AS2P0C853 105 aa11.85□□□□□ -0.51
PABPN1-207ENST00000556821 LINC00472Q9H8W2 130 aa11.85□□□□□ -0.51
PABPN1-207ENST00000556821 A8MUU9 505 aa11.84□□□□□ -0.51
PABPN1-207ENST00000556821 IGKV4-1P06312 121 aa11.84□□□□□ -0.51
PABPN1-207ENST00000556821 DSCR10P59022 87 aa11.84□□□□□ -0.51
PABPN1-207ENST00000556821 KRTAP10-6P60371 365 aaPredicted RBP11.84□□□□□ -0.51
PABPN1-207ENST00000556821 RBM3P98179 157 aaKnown RBP11.84□□□□□ -0.51
PABPN1-207ENST00000556821 ATP11AUNQ6ZP68 121 aa11.84□□□□□ -0.51
PABPN1-207ENST00000556821 LOC105371267A0A1B0GV96 52 aa11.83□□□□□ -0.52
PABPN1-207ENST00000556821 TSTD3H0UI37 97 aa11.81□□□□□ -0.52
PABPN1-207ENST00000556821 ATXN8Q156A1 80 aa11.81□□□□□ -0.52
PABPN1-207ENST00000556821 DEFB116Q30KQ4 102 aa11.8□□□□□ -0.52
PABPN1-207ENST00000556821 DSCR8Q96T75 97 aa11.8□□□□□ -0.52
PABPN1-207ENST00000556821 VPS25Q9BRG1 176 aa11.8□□□□□ -0.52
PABPN1-207ENST00000556821 KRTAP16-1A8MUX0 517 aa11.77□□□□□ -0.53
PABPN1-207ENST00000556821 NOTCH2NLQ7Z3S9 236 aa11.76□□□□□ -0.53
PABPN1-207ENST00000556821 C9JAW5 83 aa11.74□□□□□ -0.53
PABPN1-207ENST00000556821 LINC00313P59037 77 aa11.74□□□□□ -0.53
PABPN1-207ENST00000556821 BATFQ16520 125 aa11.73□□□□□ -0.53
PABPN1-207ENST00000556821 COX6B2Q6YFQ2 88 aa11.72□□□□□ -0.53
PABPN1-207ENST00000556821 Q6ZQT0 140 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms