RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 DNAH7Q8WXX0 4024 aa9.9□□□□□ -0.82
ARHGEF40-203ENST00000554514 PHF5AQ7RTV0 110 aaKnown RBP9.9□□□□□ -0.82
ARHGEF40-203ENST00000554514 OCR1Q9BZK8 76 aa9.88□□□□□ -0.83
ARHGEF40-203ENST00000554514 K7EQZ3 153 aa9.87□□□□□ -0.83
ARHGEF40-203ENST00000554514 KRTAP11-1Q8IUC1 163 aa9.87□□□□□ -0.83
ARHGEF40-203ENST00000554514 IGFL1Q6UW32 110 aa9.86□□□□□ -0.83
ARHGEF40-203ENST00000554514 SPRR4Q96PI1 79 aa9.86□□□□□ -0.83
ARHGEF40-203ENST00000554514 APLNQ9ULZ1 77 aa9.86□□□□□ -0.83
ARHGEF40-203ENST00000554514 CNBPP62633 177 aaKnown RBP9.86□□□□□ -0.83
ARHGEF40-203ENST00000554514 DSCR10P59022 87 aa9.85□□□□□ -0.83
ARHGEF40-203ENST00000554514 UBE2AP49459 152 aa9.84□□□□□ -0.83
ARHGEF40-203ENST00000554514 FP248Q71RG6 208 aaPredicted RBP9.84□□□□□ -0.83
ARHGEF40-203ENST00000554514 A0A087WSZ3 146 aa9.83□□□□□ -0.84
ARHGEF40-203ENST00000554514 SERP1Q9Y6X1 66 aa9.83□□□□□ -0.84
ARHGEF40-203ENST00000554514 EPM2AB3EWF7 344 aa9.82□□□□□ -0.84
ARHGEF40-203ENST00000554514 PMAIP1Q13794 54 aa9.82□□□□□ -0.84
ARHGEF40-203ENST00000554514 LINC00474Q9P2X8 69 aa9.82□□□□□ -0.84
ARHGEF40-203ENST00000554514 A0A1B0GW54 56 aa9.81□□□□□ -0.84
ARHGEF40-203ENST00000554514 SMIM26A0A096LP01 95 aa9.8□□□□□ -0.84
ARHGEF40-203ENST00000554514 NDUFC1O43677 76 aa9.8□□□□□ -0.84
ARHGEF40-203ENST00000554514 PLECQ15149 4684 aaKnown RBP9.8□□□□□ -0.84
ARHGEF40-203ENST00000554514 RPL37AP61513 92 aaKnown RBP9.79□□□□□ -0.84
ARHGEF40-203ENST00000554514 C14orf177Q52M58 125 aa9.78□□□□□ -0.84
ARHGEF40-203ENST00000554514 MDFIQ99750 246 aa9.78□□□□□ -0.84
ARHGEF40-203ENST00000554514 WFDC13Q8IUB5 93 aa9.78□□□□□ -0.84
ARHGEF40-203ENST00000554514 PANO1I0J062 215 aa9.77□□□□□ -0.84
ARHGEF40-203ENST00000554514 C4orf48Q5BLP8 95 aa9.75□□□□□ -0.85
ARHGEF40-203ENST00000554514 NBDYA0A0U1RRE5 68 aa9.74□□□□□ -0.85
ARHGEF40-203ENST00000554514 HCG22E2RYF7 251 aa9.74□□□□□ -0.85
ARHGEF40-203ENST00000554514 C9orf163Q8N9P6 203 aa9.74□□□□□ -0.85
ARHGEF40-203ENST00000554514 MPLKIPQ8TAP9 179 aa9.74□□□□□ -0.85
ARHGEF40-203ENST00000554514 LRCOL1A6NCL2 159 aa9.74□□□□□ -0.85
ARHGEF40-203ENST00000554514 B9D2Q9BPU9 175 aa9.72□□□□□ -0.85
ARHGEF40-203ENST00000554514 IGLV8-61A0A075B6I0 122 aa9.69□□□□□ -0.86
ARHGEF40-203ENST00000554514 DYNC2H1Q8NCM8 4307 aaKnown RBP9.69□□□□□ -0.86
ARHGEF40-203ENST00000554514 ATP5EP56381 51 aaPredicted RBP9.69□□□□□ -0.86
ARHGEF40-203ENST00000554514 CD164Q04900 197 aa9.68□□□□□ -0.86
ARHGEF40-203ENST00000554514 FAM229BQ4G0N7 80 aa9.68□□□□□ -0.86
ARHGEF40-203ENST00000554514 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.67□□□□□ -0.86
ARHGEF40-203ENST00000554514 PRR4Q16378 134 aa9.67□□□□□ -0.86
ARHGEF40-203ENST00000554514 IGLV9-49A0A0B4J1Y8 123 aa9.66□□□□□ -0.86
ARHGEF40-203ENST00000554514 STARD9Q9P2P6 4700 aa9.66□□□□□ -0.86
ARHGEF40-203ENST00000554514 NUPR2A6NF83 97 aa9.66□□□□□ -0.86
ARHGEF40-203ENST00000554514 Q6ZRN7 208 aaPredicted RBP9.66□□□□□ -0.86
ARHGEF40-203ENST00000554514 H0Y9J4 135 aa9.63□□□□□ -0.87
ARHGEF40-203ENST00000554514 LCE6AA0A183 80 aa9.62□□□□□ -0.87
ARHGEF40-203ENST00000554514 SPRR1BP22528 89 aa9.62□□□□□ -0.87
ARHGEF40-203ENST00000554514 CASC2Q6XLA1 102 aa9.6□□□□□ -0.87
ARHGEF40-203ENST00000554514 PRKDCP78527 4128 aaKnown RBP9.59□□□□□ -0.87
ARHGEF40-203ENST00000554514 SPACA4Q8TDM5 124 aa9.59□□□□□ -0.87
ARHGEF40-203ENST00000554514 PRR15Q8IV56 129 aa9.58□□□□□ -0.88
ARHGEF40-203ENST00000554514 ZCCHC13Q8WW36 166 aaKnown RBP9.58□□□□□ -0.88
ARHGEF40-203ENST00000554514 LINC00208Q96KT6 92 aa9.58□□□□□ -0.88
ARHGEF40-203ENST00000554514 LINC00472Q9H8W2 130 aa9.57□□□□□ -0.88
ARHGEF40-203ENST00000554514 A0A087WTM6 91 aa9.57□□□□□ -0.88
ARHGEF40-203ENST00000554514 KRTAP13-1Q8IUC0 172 aa9.57□□□□□ -0.88
ARHGEF40-203ENST00000554514 ANAPC11Q9NYG5 84 aa9.57□□□□□ -0.88
ARHGEF40-203ENST00000554514 KMT2AQ03164 3969 aa9.57□□□□□ -0.88
ARHGEF40-203ENST00000554514 A8MWP4 228 aa9.56□□□□□ -0.88
ARHGEF40-203ENST00000554514 MP68P56378 58 aa9.56□□□□□ -0.88
ARHGEF40-203ENST00000554514 FRAS1Q86XX4 4008 aa9.55□□□□□ -0.88
ARHGEF40-203ENST00000554514 KRTAP29-1A8MX34 341 aaPredicted RBP9.55□□□□□ -0.88
ARHGEF40-203ENST00000554514 RTL8CO15255 209 aa9.54□□□□□ -0.88
ARHGEF40-203ENST00000554514 VPS13DQ5THJ4 4388 aa9.54□□□□□ -0.88
ARHGEF40-203ENST00000554514 C1orf64Q8NEQ6 169 aa9.53□□□□□ -0.88
ARHGEF40-203ENST00000554514 HECTD4Q9Y4D8 3996 aa9.53□□□□□ -0.88
ARHGEF40-203ENST00000554514 H0Y9P7 68 aa9.52□□□□□ -0.88
ARHGEF40-203ENST00000554514 TGP01266 2768 aa9.52□□□□□ -0.89
ARHGEF40-203ENST00000554514 PSORS1C2Q9UIG4 136 aa9.52□□□□□ -0.89
ARHGEF40-203ENST00000554514 hDV103S1A0JD37 113 aa9.5□□□□□ -0.89
ARHGEF40-203ENST00000554514 DNAH2Q9P225 4427 aa9.5□□□□□ -0.89
ARHGEF40-203ENST00000554514 MOBPQ13875 183 aa9.5□□□□□ -0.89
ARHGEF40-203ENST00000554514 TRAV22A0A0B4J277 110 aa9.48□□□□□ -0.89
ARHGEF40-203ENST00000554514 NDUFB1O75438 58 aa9.48□□□□□ -0.89
ARHGEF40-203ENST00000554514 RBM12B-AS1Q9P1G2 102 aa9.48□□□□□ -0.89
ARHGEF40-203ENST00000554514 MEGF8Q7Z7M0 2845 aa9.47□□□□□ -0.89
ARHGEF40-203ENST00000554514 MMP24-AS1A0A0U1RRL7 71 aa9.47□□□□□ -0.89
ARHGEF40-203ENST00000554514 IGLV5-52A0A0A0MRZ9 124 aa9.45□□□□□ -0.9
ARHGEF40-203ENST00000554514 DNAH8Q96JB1 4490 aa9.45□□□□□ -0.9
ARHGEF40-203ENST00000554514 Q96NJ1 140 aa9.44□□□□□ -0.9
ARHGEF40-203ENST00000554514 IGHV6-1A0A0B4J1U7 121 aa9.44□□□□□ -0.9
ARHGEF40-203ENST00000554514 H3BS24 57 aa9.43□□□□□ -0.9
ARHGEF40-203ENST00000554514 WWC2-AS2Q96NR7 200 aa9.42□□□□□ -0.9
ARHGEF40-203ENST00000554514 NDUFS5O43920 106 aa9.42□□□□□ -0.9
ARHGEF40-203ENST00000554514 ZNF706Q9Y5V0 76 aaPredicted RBP9.42□□□□□ -0.9
ARHGEF40-203ENST00000554514 LINC00483Q53H64 154 aa9.41□□□□□ -0.9
ARHGEF40-203ENST00000554514 LY6G6CO95867 125 aa9.41□□□□□ -0.9
ARHGEF40-203ENST00000554514 FBN3Q75N90 2809 aa9.41□□□□□ -0.9
ARHGEF40-203ENST00000554514 ZNF861PO60384 105 aa9.4□□□□□ -0.9
ARHGEF40-203ENST00000554514 Q6ZR54 194 aa9.4□□□□□ -0.9
ARHGEF40-203ENST00000554514 DNAH17Q9UFH2 4485 aa9.4□□□□□ -0.9
ARHGEF40-203ENST00000554514 C1orf134Q5TEV5 83 aa9.39□□□□□ -0.91
ARHGEF40-203ENST00000554514 PLAC8Q9NZF1 115 aa9.39□□□□□ -0.91
ARHGEF40-203ENST00000554514 PSPHP1O15172 72 aa9.38□□□□□ -0.91
ARHGEF40-203ENST00000554514 SPINK6Q6UWN8 80 aa9.38□□□□□ -0.91
ARHGEF40-203ENST00000554514 CYP4F30PQ9H0H9 118 aa9.38□□□□□ -0.91
ARHGEF40-203ENST00000554514 CDK2AP2O75956 126 aa9.38□□□□□ -0.91
ARHGEF40-203ENST00000554514 PCOTHQ58A44 107 aa9.38□□□□□ -0.91
ARHGEF40-203ENST00000554514 C8orf17Q9NRJ1 99 aa9.37□□□□□ -0.91
ARHGEF40-203ENST00000554514 DNHD1Q96M86 4753 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms