RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 A0A1B0GW54 56 aa9.17□□□□□ -0.94
ACTN1-211ENST00000553882 CNBPP62633 177 aaKnown RBP9.17□□□□□ -0.94
ACTN1-211ENST00000553882 K7EQZ3 153 aa9.16□□□□□ -0.94
ACTN1-211ENST00000553882 DSCR10P59022 87 aa9.16□□□□□ -0.94
ACTN1-211ENST00000553882 DEFB116Q30KQ4 102 aa9.16□□□□□ -0.94
ACTN1-211ENST00000553882 IGFL1Q6UW32 110 aa9.16□□□□□ -0.94
ACTN1-211ENST00000553882 KRTAP11-1Q8IUC1 163 aa9.16□□□□□ -0.94
ACTN1-211ENST00000553882 Q5XG85 94 aa9.15□□□□□ -0.94
ACTN1-211ENST00000553882 PHF5AQ7RTV0 110 aaKnown RBP9.15□□□□□ -0.94
ACTN1-211ENST00000553882 SERP1Q9Y6X1 66 aa9.15□□□□□ -0.95
ACTN1-211ENST00000553882 NDUFC1O43677 76 aa9.14□□□□□ -0.95
ACTN1-211ENST00000553882 EPM2AB3EWF7 344 aa9.14□□□□□ -0.95
ACTN1-211ENST00000553882 APLNQ9ULZ1 77 aa9.13□□□□□ -0.95
ACTN1-211ENST00000553882 PLECQ15149 4684 aaKnown RBP9.12□□□□□ -0.95
ACTN1-211ENST00000553882 A0A0U1RQV1 116 aa9.12□□□□□ -0.95
ACTN1-211ENST00000553882 A0A087WSZ3 146 aa9.11□□□□□ -0.95
ACTN1-211ENST00000553882 UBE2AP49459 152 aa9.09□□□□□ -0.95
ACTN1-211ENST00000553882 C14orf177Q52M58 125 aa9.07□□□□□ -0.96
ACTN1-211ENST00000553882 H3BS24 57 aa9.05□□□□□ -0.96
ACTN1-211ENST00000553882 PANO1I0J062 215 aa9.05□□□□□ -0.96
ACTN1-211ENST00000553882 HCG22E2RYF7 251 aa9.05□□□□□ -0.96
ACTN1-211ENST00000553882 RPL37AP61513 92 aaKnown RBP9.05□□□□□ -0.96
ACTN1-211ENST00000553882 C9orf163Q8N9P6 203 aa9.04□□□□□ -0.96
ACTN1-211ENST00000553882 DYNC2H1Q8NCM8 4307 aaKnown RBP9.04□□□□□ -0.96
ACTN1-211ENST00000553882 LRCOL1A6NCL2 159 aa9.04□□□□□ -0.96
ACTN1-211ENST00000553882 WFDC13Q8IUB5 93 aa9.04□□□□□ -0.96
ACTN1-211ENST00000553882 IGLV8-61A0A075B6I0 122 aa9.03□□□□□ -0.96
ACTN1-211ENST00000553882 MDFIQ99750 246 aa9.03□□□□□ -0.96
ACTN1-211ENST00000553882 LINC00474Q9P2X8 69 aa9.03□□□□□ -0.96
ACTN1-211ENST00000553882 NBDYA0A0U1RRE5 68 aa9.02□□□□□ -0.96
ACTN1-211ENST00000553882 ATP5EP56381 51 aaPredicted RBP9.02□□□□□ -0.96
ACTN1-211ENST00000553882 CD164Q04900 197 aa9.02□□□□□ -0.96
ACTN1-211ENST00000553882 FP248Q71RG6 208 aaPredicted RBP9.02□□□□□ -0.96
ACTN1-211ENST00000553882 STARD9Q9P2P6 4700 aa9.01□□□□□ -0.97
ACTN1-211ENST00000553882 B9D2Q9BPU9 175 aa9.01□□□□□ -0.97
ACTN1-211ENST00000553882 FAM229BQ4G0N7 80 aa9□□□□□ -0.97
ACTN1-211ENST00000553882 SMIM26A0A096LP01 95 aa8.99□□□□□ -0.97
ACTN1-211ENST00000553882 LCE6AA0A183 80 aa8.99□□□□□ -0.97
ACTN1-211ENST00000553882 H0Y9J4 135 aa8.98□□□□□ -0.97
ACTN1-211ENST00000553882 Q6ZRN7 208 aaPredicted RBP8.98□□□□□ -0.97
ACTN1-211ENST00000553882 PRKDCP78527 4128 aaKnown RBP8.97□□□□□ -0.97
ACTN1-211ENST00000553882 FRAS1Q86XX4 4008 aa8.97□□□□□ -0.97
ACTN1-211ENST00000553882 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.96□□□□□ -0.97
ACTN1-211ENST00000553882 KMT2AQ03164 3969 aa8.96□□□□□ -0.98
ACTN1-211ENST00000553882 SPRR1BP22528 89 aa8.96□□□□□ -0.98
ACTN1-211ENST00000553882 NUPR2A6NF83 97 aa8.94□□□□□ -0.98
ACTN1-211ENST00000553882 PMAIP1Q13794 54 aa8.94□□□□□ -0.98
ACTN1-211ENST00000553882 ZCCHC13Q8WW36 166 aaKnown RBP8.94□□□□□ -0.98
ACTN1-211ENST00000553882 PRR4Q16378 134 aa8.93□□□□□ -0.98
ACTN1-211ENST00000553882 MPLKIPQ8TAP9 179 aa8.93□□□□□ -0.98
ACTN1-211ENST00000553882 HECTD4Q9Y4D8 3996 aa8.93□□□□□ -0.98
ACTN1-211ENST00000553882 TGP01266 2768 aa8.92□□□□□ -0.98
ACTN1-211ENST00000553882 IGLV9-49A0A0B4J1Y8 123 aa8.92□□□□□ -0.98
ACTN1-211ENST00000553882 KRTAP13-1Q8IUC0 172 aa8.91□□□□□ -0.98
ACTN1-211ENST00000553882 LINC00472Q9H8W2 130 aa8.91□□□□□ -0.98
ACTN1-211ENST00000553882 CASC2Q6XLA1 102 aa8.9□□□□□ -0.98
ACTN1-211ENST00000553882 PRR15Q8IV56 129 aa8.9□□□□□ -0.98
ACTN1-211ENST00000553882 SPACA4Q8TDM5 124 aa8.9□□□□□ -0.98
ACTN1-211ENST00000553882 KRTAP29-1A8MX34 341 aaPredicted RBP8.89□□□□□ -0.99
ACTN1-211ENST00000553882 VPS13DQ5THJ4 4388 aa8.89□□□□□ -0.99
ACTN1-211ENST00000553882 A8MWP4 228 aa8.88□□□□□ -0.99
ACTN1-211ENST00000553882 MEGF8Q7Z7M0 2845 aa8.88□□□□□ -0.99
ACTN1-211ENST00000553882 LINC00208Q96KT6 92 aa8.87□□□□□ -0.99
ACTN1-211ENST00000553882 MP68P56378 58 aa8.87□□□□□ -0.99
ACTN1-211ENST00000553882 A0A087WTM6 91 aa8.86□□□□□ -0.99
ACTN1-211ENST00000553882 C1orf64Q8NEQ6 169 aa8.86□□□□□ -0.99
ACTN1-211ENST00000553882 DNAH2Q9P225 4427 aa8.86□□□□□ -0.99
ACTN1-211ENST00000553882 hDV103S1A0JD37 113 aa8.84□□□□□ -0.99
ACTN1-211ENST00000553882 BRK1Q8WUW1 75 aa8.84□□□□□ -0.99
ACTN1-211ENST00000553882 ANAPC11Q9NYG5 84 aa8.84□□□□□ -1
ACTN1-211ENST00000553882 H0Y9P7 68 aa8.83□□□□□ -1
ACTN1-211ENST00000553882 FBN3Q75N90 2809 aa8.83□□□□□ -1
ACTN1-211ENST00000553882 RTL8CO15255 209 aa8.83□□□□□ -1
ACTN1-211ENST00000553882 TRAV22A0A0B4J277 110 aa8.82□□□□□ -1
ACTN1-211ENST00000553882 PSORS1C2Q9UIG4 136 aa8.82□□□□□ -1
ACTN1-211ENST00000553882 DNAH8Q96JB1 4490 aa8.8□□□□□ -1
ACTN1-211ENST00000553882 MMP24-AS1A0A0U1RRL7 71 aa8.8□□□□□ -1
ACTN1-211ENST00000553882 NDUFB1O75438 58 aa8.79□□□□□ -1
ACTN1-211ENST00000553882 PRR26Q8N8Z3 221 aa8.79□□□□□ -1
ACTN1-211ENST00000553882 MOBPQ13875 183 aa8.79□□□□□ -1
ACTN1-211ENST00000553882 Q96NJ1 140 aa8.79□□□□□ -1
ACTN1-211ENST00000553882 IGLV5-52A0A0A0MRZ9 124 aa8.77□□□□□ -1.01
ACTN1-211ENST00000553882 DNAH17Q9UFH2 4485 aa8.76□□□□□ -1.01
ACTN1-211ENST00000553882 LINC00483Q53H64 154 aa8.76□□□□□ -1.01
ACTN1-211ENST00000553882 WWC2-AS2Q96NR7 200 aa8.76□□□□□ -1.01
ACTN1-211ENST00000553882 CYP4F30PQ9H0H9 118 aa8.75□□□□□ -1.01
ACTN1-211ENST00000553882 DNHD1Q96M86 4753 aa8.75□□□□□ -1.01
ACTN1-211ENST00000553882 DNAH6Q9C0G6 4158 aa8.74□□□□□ -1.01
ACTN1-211ENST00000553882 Q6ZR54 194 aa8.73□□□□□ -1.01
ACTN1-211ENST00000553882 IGHV6-1A0A0B4J1U7 121 aa8.73□□□□□ -1.01
ACTN1-211ENST00000553882 ZNF706Q9Y5V0 76 aaPredicted RBP8.73□□□□□ -1.01
ACTN1-211ENST00000553882 ZNF861PO60384 105 aa8.72□□□□□ -1.01
ACTN1-211ENST00000553882 PLAC8Q9NZF1 115 aa8.72□□□□□ -1.01
ACTN1-211ENST00000553882 H3BPC8 53 aa8.69□□□□□ -1.02
ACTN1-211ENST00000553882 C8orf17Q9NRJ1 99 aa8.69□□□□□ -1.02
ACTN1-211ENST00000553882 NDUFS5O43920 106 aa8.69□□□□□ -1.02
ACTN1-211ENST00000553882 PSPHP1O15172 72 aa8.68□□□□□ -1.02
ACTN1-211ENST00000553882 C1orf134Q5TEV5 83 aa8.68□□□□□ -1.02
ACTN1-211ENST00000553882 PCOTHQ58A44 107 aa8.67□□□□□ -1.02
ACTN1-211ENST00000553882 A0A087X002 238 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms