RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 LIMD2Q9BT23 127 aa11.4□□□□□ -0.58
FOXA1-203ENST00000553751 A0A0G2JQZ4 141 aa11.37□□□□□ -0.59
FOXA1-203ENST00000553751 FXYD2P54710 66 aa11.37□□□□□ -0.59
FOXA1-203ENST00000553751 TMEM238LA0A1B0GVL6 79 aa11.36□□□□□ -0.59
FOXA1-203ENST00000553751 A6NJY4 79 aa11.36□□□□□ -0.59
FOXA1-203ENST00000553751 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.36□□□□□ -0.59
FOXA1-203ENST00000553751 F8WEM9 126 aa11.33□□□□□ -0.6
FOXA1-203ENST00000553751 PRO1854Q9UHT4 67 aa11.33□□□□□ -0.6
FOXA1-203ENST00000553751 HSD52Q0P140 79 aa11.32□□□□□ -0.6
FOXA1-203ENST00000553751 Q5XG85 94 aa11.31□□□□□ -0.6
FOXA1-203ENST00000553751 H0YGX0 51 aa11.3□□□□□ -0.6
FOXA1-203ENST00000553751 PPDPFLQ8WWR9 84 aa11.3□□□□□ -0.6
FOXA1-203ENST00000553751 FAM218AQ96MZ4 157 aa11.3□□□□□ -0.6
FOXA1-203ENST00000553751 IGLV8-61A0A075B6I0 122 aa11.29□□□□□ -0.6
FOXA1-203ENST00000553751 UQCR10Q9UDW1 63 aa11.28□□□□□ -0.6
FOXA1-203ENST00000553751 Q6JHZ5 121 aa11.26□□□□□ -0.61
FOXA1-203ENST00000553751 OCIAD2Q56VL3 154 aa11.25□□□□□ -0.61
FOXA1-203ENST00000553751 CLEC2BQ92478 149 aa11.25□□□□□ -0.61
FOXA1-203ENST00000553751 K7ERJ3 54 aa11.24□□□□□ -0.61
FOXA1-203ENST00000553751 TRIAP1O43715 76 aa11.24□□□□□ -0.61
FOXA1-203ENST00000553751 IGFL1Q6UW32 110 aa11.24□□□□□ -0.61
FOXA1-203ENST00000553751 SNCGO76070 127 aa11.23□□□□□ -0.61
FOXA1-203ENST00000553751 SNHG12Q9BXW3 62 aa11.23□□□□□ -0.61
FOXA1-203ENST00000553751 ASB16-AS1Q495Z4 193 aa11.22□□□□□ -0.61
FOXA1-203ENST00000553751 XP32Q5T750 250 aa11.22□□□□□ -0.61
FOXA1-203ENST00000553751 C1orf195Q5TG92 126 aa11.22□□□□□ -0.61
FOXA1-203ENST00000553751 A0A1B0GX51 115 aa11.21□□□□□ -0.61
FOXA1-203ENST00000553751 H3BUT2 72 aa11.19□□□□□ -0.62
FOXA1-203ENST00000553751 TCL1BO95988 128 aa11.18□□□□□ -0.62
FOXA1-203ENST00000553751 TRBV7-7A0A0K0K1E9 115 aa11.17□□□□□ -0.62
FOXA1-203ENST00000553751 FAT4Q6V0I7 4981 aa11.17□□□□□ -0.62
FOXA1-203ENST00000553751 A0A0U1RQV1 116 aa11.16□□□□□ -0.62
FOXA1-203ENST00000553751 C9orf92A6NGG3 77 aa11.15□□□□□ -0.62
FOXA1-203ENST00000553751 NDUFV3P56181 108 aaKnown RBP11.15□□□□□ -0.62
FOXA1-203ENST00000553751 SEC61BP60468 96 aaKnown RBP11.15□□□□□ -0.62
FOXA1-203ENST00000553751 PSMB2P49721 201 aa11.14□□□□□ -0.63
FOXA1-203ENST00000553751 GHRHP01286 108 aa11.11□□□□□ -0.63
FOXA1-203ENST00000553751 FABP2P12104 132 aa11.1□□□□□ -0.63
FOXA1-203ENST00000553751 COX6CP09669 75 aa11.09□□□□□ -0.63
FOXA1-203ENST00000553751 SMIM6P0DI80 62 aa11.09□□□□□ -0.63
FOXA1-203ENST00000553751 KRTAP4-1Q9BYQ7 146 aa11.09□□□□□ -0.63
FOXA1-203ENST00000553751 DNAL4O96015 105 aa11.08□□□□□ -0.64
FOXA1-203ENST00000553751 Q6Q795 121 aa11.08□□□□□ -0.64
FOXA1-203ENST00000553751 H3BMG7 143 aa11.07□□□□□ -0.64
FOXA1-203ENST00000553751 ORMDL1Q9P0S3 153 aa11.06□□□□□ -0.64
FOXA1-203ENST00000553751 TEN1Q86WV5 123 aa11.04□□□□□ -0.64
FOXA1-203ENST00000553751 H3BQ85 93 aa11.01□□□□□ -0.65
FOXA1-203ENST00000553751 M0R143 59 aa11□□□□□ -0.65
FOXA1-203ENST00000553751 LST1O00453 97 aa11□□□□□ -0.65
FOXA1-203ENST00000553751 SS18L2Q9UHA2 77 aa11□□□□□ -0.65
FOXA1-203ENST00000553751 TRACP01848 142 aa10.99□□□□□ -0.65
FOXA1-203ENST00000553751 PCOTHQ58A44 107 aa10.99□□□□□ -0.65
FOXA1-203ENST00000553751 A0A087WSZ3 146 aa10.98□□□□□ -0.65
FOXA1-203ENST00000553751 TMEM256-PLSCR3K7ERE1 68 aa10.98□□□□□ -0.65
FOXA1-203ENST00000553751 SCGB1C2P0DMR2 95 aa10.98□□□□□ -0.65
FOXA1-203ENST00000553751 LCE2AQ5TA79 106 aaPredicted RBP10.98□□□□□ -0.65
FOXA1-203ENST00000553751 A0A1W2PNM2 257 aa10.97□□□□□ -0.65
FOXA1-203ENST00000553751 A0A1B0GV72 72 aa10.96□□□□□ -0.65
FOXA1-203ENST00000553751 RPL37P61927 97 aaKnown RBP10.95□□□□□ -0.66
FOXA1-203ENST00000553751 LOC105371267A0A1B0GV96 52 aa10.94□□□□□ -0.66
FOXA1-203ENST00000553751 UBE2V1Q13404 147 aa10.93□□□□□ -0.66
FOXA1-203ENST00000553751 ANKRD29Q8N6D5 301 aa10.93□□□□□ -0.66
FOXA1-203ENST00000553751 TSTD3H0UI37 97 aa10.91□□□□□ -0.66
FOXA1-203ENST00000553751 Q96NJ1 140 aa10.91□□□□□ -0.66
FOXA1-203ENST00000553751 NAA38Q9BRA0 125 aaKnown RBP10.9□□□□□ -0.66
FOXA1-203ENST00000553751 TRBV7-4A0A0J9YYF1 115 aa10.89□□□□□ -0.67
FOXA1-203ENST00000553751 OBSCN-AS1Q96MR7 158 aa10.89□□□□□ -0.67
FOXA1-203ENST00000553751 CCKP06307 115 aa10.85□□□□□ -0.67
FOXA1-203ENST00000553751 BAALC-AS2P0C853 105 aa10.83□□□□□ -0.68
FOXA1-203ENST00000553751 ATXN8Q156A1 80 aa10.83□□□□□ -0.68
FOXA1-203ENST00000553751 RBM3P98179 157 aaKnown RBP10.82□□□□□ -0.68
FOXA1-203ENST00000553751 BATFQ16520 125 aa10.8□□□□□ -0.68
FOXA1-203ENST00000553751 KRTAP19-2Q3LHN2 52 aa10.8□□□□□ -0.68
FOXA1-203ENST00000553751 Q75L30 129 aa10.8□□□□□ -0.68
FOXA1-203ENST00000553751 SIGMAR1Q99720 223 aa10.79□□□□□ -0.68
FOXA1-203ENST00000553751 LCE2CQ5TA81 110 aa10.78□□□□□ -0.68
FOXA1-203ENST00000553751 DSCR8Q96T75 97 aa10.78□□□□□ -0.68
FOXA1-203ENST00000553751 VPS25Q9BRG1 176 aa10.76□□□□□ -0.69
FOXA1-203ENST00000553751 LINC00472Q9H8W2 130 aa10.76□□□□□ -0.69
FOXA1-203ENST00000553751 IGKV4-1P06312 121 aa10.75□□□□□ -0.69
FOXA1-203ENST00000553751 LYRM7Q5U5X0 104 aa10.75□□□□□ -0.69
FOXA1-203ENST00000553751 C20orf166-AS1Q96NR2 134 aa10.74□□□□□ -0.69
FOXA1-203ENST00000553751 C9JAW5 83 aa10.73□□□□□ -0.69
FOXA1-203ENST00000553751 DSCR10P59022 87 aa10.73□□□□□ -0.69
FOXA1-203ENST00000553751 DEFB116Q30KQ4 102 aa10.72□□□□□ -0.69
FOXA1-203ENST00000553751 ATP11AUNQ6ZP68 121 aa10.72□□□□□ -0.69
FOXA1-203ENST00000553751 TRBV20-1A0A075B6N2 111 aa10.71□□□□□ -0.69
FOXA1-203ENST00000553751 A8MUU9 505 aa10.71□□□□□ -0.69
FOXA1-203ENST00000553751 JMJD7-PLA2G4BH0Y9G9 81 aa10.69□□□□□ -0.7
FOXA1-203ENST00000553751 C9orf118A6NHY6 69 aa10.68□□□□□ -0.7
FOXA1-203ENST00000553751 TAX1BP3O14907 124 aa10.68□□□□□ -0.7
FOXA1-203ENST00000553751 Q6ZQT0 140 aa10.67□□□□□ -0.7
FOXA1-203ENST00000553751 LOC110117498A0A087WWA1 95 aa10.66□□□□□ -0.7
FOXA1-203ENST00000553751 LINC00313P59037 77 aa10.66□□□□□ -0.7
FOXA1-203ENST00000553751 KRTAP16-1A8MUX0 517 aa10.65□□□□□ -0.7
FOXA1-203ENST00000553751 C21orf62-AS1Q17RA5 79 aa10.65□□□□□ -0.7
FOXA1-203ENST00000553751 NOTCH2NLQ7Z3S9 236 aa10.64□□□□□ -0.71
FOXA1-203ENST00000553751 A0A1W2PPM0 123 aa10.63□□□□□ -0.71
FOXA1-203ENST00000553751 MT1HP80294 61 aa10.62□□□□□ -0.71
FOXA1-203ENST00000553751 C14orf132Q9NPU4 83 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms