RNA–Protein interactions for RNA: ENST00000553277.5

LRP1-204, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 1,693 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-204ENST00000553277 EPM2AB3EWF7 344 aa11.7□□□□□ -0.54
LRP1-204ENST00000553277 UBE2BP63146 152 aa11.7□□□□□ -0.54
LRP1-204ENST00000553277 PKD1P98161 4303 aa11.69□□□□□ -0.54
LRP1-204ENST00000553277 SPRR4Q96PI1 79 aa11.69□□□□□ -0.54
LRP1-204ENST00000553277 C1orf137Q5JT78 98 aa11.68□□□□□ -0.54
LRP1-204ENST00000553277 Q8NBF4 154 aa11.68□□□□□ -0.54
LRP1-204ENST00000553277 IGKV2-24A0A0C4DH68 120 aa11.68□□□□□ -0.54
LRP1-204ENST00000553277 A0A1B0GVY2 172 aa11.68□□□□□ -0.54
LRP1-204ENST00000553277 ST20-AS1Q8NBB2 130 aa11.68□□□□□ -0.54
LRP1-204ENST00000553277 SPACA4Q8TDM5 124 aa11.68□□□□□ -0.54
LRP1-204ENST00000553277 ERC2-IT1O76042 136 aa11.67□□□□□ -0.54
LRP1-204ENST00000553277 A0A1W2PNM2 257 aa11.66□□□□□ -0.54
LRP1-204ENST00000553277 CHTF8P0CG12 524 aa11.66□□□□□ -0.54
LRP1-204ENST00000553277 A0A1W2PNN7 141 aa11.65□□□□□ -0.54
LRP1-204ENST00000553277 PANO1I0J062 215 aa11.65□□□□□ -0.54
LRP1-204ENST00000553277 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.65□□□□□ -0.54
LRP1-204ENST00000553277 H0Y9J4 135 aa11.65□□□□□ -0.55
LRP1-204ENST00000553277 BPY2O14599 106 aa11.65□□□□□ -0.55
LRP1-204ENST00000553277 RPS28P62857 69 aaKnown RBP11.65□□□□□ -0.55
LRP1-204ENST00000553277 SMIM29Q86T20 159 aa11.65□□□□□ -0.55
LRP1-204ENST00000553277 IGLV8-61A0A075B6I0 122 aa11.63□□□□□ -0.55
LRP1-204ENST00000553277 IGKV4-1P06312 121 aa11.63□□□□□ -0.55
LRP1-204ENST00000553277 SCXQ7RTU7 201 aa11.63□□□□□ -0.55
LRP1-204ENST00000553277 CYSTM1Q9H1C7 97 aa11.63□□□□□ -0.55
LRP1-204ENST00000553277 Q6ZSA8 131 aa11.62□□□□□ -0.55
LRP1-204ENST00000553277 DNAH5Q8TE73 4624 aa11.62□□□□□ -0.55
LRP1-204ENST00000553277 F8WEM9 126 aa11.61□□□□□ -0.55
LRP1-204ENST00000553277 PLAC8Q9NZF1 115 aa11.6□□□□□ -0.55
LRP1-204ENST00000553277 KLKP1Q107X0 134 aa11.59□□□□□ -0.55
LRP1-204ENST00000553277 KRTAP10-1P60331 282 aa11.59□□□□□ -0.55
LRP1-204ENST00000553277 C20orf197Q8N268 126 aa11.58□□□□□ -0.56
LRP1-204ENST00000553277 J3KT08 172 aa11.57□□□□□ -0.56
LRP1-204ENST00000553277 SPRR1BP22528 89 aa11.57□□□□□ -0.56
LRP1-204ENST00000553277 RYR3Q15413 4870 aa11.55□□□□□ -0.56
LRP1-204ENST00000553277 PKHD1P08F94 4074 aa11.55□□□□□ -0.56
LRP1-204ENST00000553277 FAM30AQ9NZY2 134 aa11.55□□□□□ -0.56
LRP1-204ENST00000553277 DPH3Q96FX2 82 aa11.54□□□□□ -0.56
LRP1-204ENST00000553277 PRLHP81277 87 aa11.53□□□□□ -0.56
LRP1-204ENST00000553277 NDUFC1O43677 76 aa11.52□□□□□ -0.56
LRP1-204ENST00000553277 DNAH8Q96JB1 4490 aa11.51□□□□□ -0.57
LRP1-204ENST00000553277 IGFL1Q6UW32 110 aa11.51□□□□□ -0.57
LRP1-204ENST00000553277 PHF5AQ7RTV0 110 aaKnown RBP11.51□□□□□ -0.57
LRP1-204ENST00000553277 Q8N9L7 120 aa11.51□□□□□ -0.57
LRP1-204ENST00000553277 HIGD2AQ9BW72 106 aa11.49□□□□□ -0.57
LRP1-204ENST00000553277 OCR1Q9BZK8 76 aa11.49□□□□□ -0.57
LRP1-204ENST00000553277 H7BZZ5 65 aa11.49□□□□□ -0.57
LRP1-204ENST00000553277 CIRBP-AS1Q8TBR5 109 aa11.49□□□□□ -0.57
LRP1-204ENST00000553277 UBE2AP49459 152 aa11.47□□□□□ -0.57
LRP1-204ENST00000553277 KRTAP11-1Q8IUC1 163 aa11.47□□□□□ -0.57
LRP1-204ENST00000553277 DSCR10P59022 87 aa11.46□□□□□ -0.58
LRP1-204ENST00000553277 LRP1BQ9NZR2 4599 aa11.44□□□□□ -0.58
LRP1-204ENST00000553277 KRTAP13-1Q8IUC0 172 aa11.44□□□□□ -0.58
LRP1-204ENST00000553277 FAM236DA0A1B0GTK5 79 aa11.43□□□□□ -0.58
LRP1-204ENST00000553277 FAM236CP0DP71 79 aa11.43□□□□□ -0.58
LRP1-204ENST00000553277 TMEM254Q8TBM7 123 aa11.43□□□□□ -0.58
LRP1-204ENST00000553277 DYNC1H1Q14204 4646 aaKnown RBP11.4□□□□□ -0.58
LRP1-204ENST00000553277 ATP5EP56381 51 aaPredicted RBP11.4□□□□□ -0.58
LRP1-204ENST00000553277 SNURFQ9Y675 71 aa11.39□□□□□ -0.59
LRP1-204ENST00000553277 A0A0U1RQV1 116 aa11.38□□□□□ -0.59
LRP1-204ENST00000553277 K7EQZ3 153 aa11.36□□□□□ -0.59
LRP1-204ENST00000553277 A0A087WSZ3 146 aa11.36□□□□□ -0.59
LRP1-204ENST00000553277 PSORS1C2Q9UIG4 136 aa11.36□□□□□ -0.59
LRP1-204ENST00000553277 SERP1Q9Y6X1 66 aa11.35□□□□□ -0.59
LRP1-204ENST00000553277 HCG22E2RYF7 251 aa11.34□□□□□ -0.59
LRP1-204ENST00000553277 RPL37AP61513 92 aaKnown RBP11.33□□□□□ -0.6
LRP1-204ENST00000553277 A0A0G2JQZ4 141 aa11.32□□□□□ -0.6
LRP1-204ENST00000553277 LINC00483Q53H64 154 aa11.3□□□□□ -0.6
LRP1-204ENST00000553277 ZNF706Q9Y5V0 76 aaPredicted RBP11.29□□□□□ -0.6
LRP1-204ENST00000553277 OXTP01178 125 aa11.28□□□□□ -0.6
LRP1-204ENST00000553277 C5orf47Q569G3 176 aa11.28□□□□□ -0.6
LRP1-204ENST00000553277 SVIPQ8NHG7 77 aa11.28□□□□□ -0.6
LRP1-204ENST00000553277 LINC00472Q9H8W2 130 aa11.28□□□□□ -0.6
LRP1-204ENST00000553277 APOBP04114 4563 aaKnown RBP11.27□□□□□ -0.61
LRP1-204ENST00000553277 CDK2AP2O75956 126 aa11.26□□□□□ -0.61
LRP1-204ENST00000553277 SRRM2Q9UQ35 2752 aaKnown RBP11.25□□□□□ -0.61
LRP1-204ENST00000553277 ZNF861PO60384 105 aa11.24□□□□□ -0.61
LRP1-204ENST00000553277 IGLV7-43P04211 117 aa11.24□□□□□ -0.61
LRP1-204ENST00000553277 A8MWP4 228 aa11.24□□□□□ -0.61
LRP1-204ENST00000553277 PRR15Q8IV56 129 aa11.24□□□□□ -0.61
LRP1-204ENST00000553277 KRTAP29-1A8MX34 341 aaPredicted RBP11.22□□□□□ -0.61
LRP1-204ENST00000553277 ZCCHC13Q8WW36 166 aaKnown RBP11.22□□□□□ -0.61
LRP1-204ENST00000553277 VPS13BQ7Z7G8 4022 aa11.22□□□□□ -0.61
LRP1-204ENST00000553277 DEFB116Q30KQ4 102 aa11.19□□□□□ -0.62
LRP1-204ENST00000553277 KRTAP10-4P60372 401 aaPredicted RBP11.16□□□□□ -0.62
LRP1-204ENST00000553277 SMR3BP02814 79 aaPredicted RBP11.14□□□□□ -0.63
LRP1-204ENST00000553277 CASC2Q6XLA1 102 aa11.14□□□□□ -0.63
LRP1-204ENST00000553277 SMIM26A0A096LP01 95 aa11.14□□□□□ -0.63
LRP1-204ENST00000553277 H3BPC8 53 aa11.14□□□□□ -0.63
LRP1-204ENST00000553277 WFDC13Q8IUB5 93 aa11.14□□□□□ -0.63
LRP1-204ENST00000553277 Q5XG85 94 aa11.13□□□□□ -0.63
LRP1-204ENST00000553277 EPPK1P58107 5090 aaKnown RBP11.12□□□□□ -0.63
LRP1-204ENST00000553277 NDUFB1O75438 58 aa11.12□□□□□ -0.63
LRP1-204ENST00000553277 IGLV9-49A0A0B4J1Y8 123 aa11.11□□□□□ -0.63
LRP1-204ENST00000553277 MP68P56378 58 aa11.11□□□□□ -0.63
LRP1-204ENST00000553277 Q96NJ1 140 aa11.1□□□□□ -0.63
LRP1-204ENST00000553277 HSPG2P98160 4391 aa11.09□□□□□ -0.63
LRP1-204ENST00000553277 FAT1Q14517 4588 aa11.08□□□□□ -0.64
LRP1-204ENST00000553277 MMP24-AS1A0A0U1RRL7 71 aa11.07□□□□□ -0.64
LRP1-204ENST00000553277 ASB16-AS1Q495Z4 193 aa11.07□□□□□ -0.64
LRP1-204ENST00000553277 SPINK6Q6UWN8 80 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms