RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 Q1RN00 199 aa6.9□□□□□ -1.3
CKAP4-202ENST00000552828 KRTAP13-2Q52LG2 175 aa6.9□□□□□ -1.3
CKAP4-202ENST00000552828 MTURNQ8N3F0 131 aa6.9□□□□□ -1.3
CKAP4-202ENST00000552828 OR13C6PQ8NH95 151 aa6.9□□□□□ -1.3
CKAP4-202ENST00000552828 TRAV23DV6A0A075B6W5 121 aa6.89□□□□□ -1.31
CKAP4-202ENST00000552828 KRTAP4-16G5E9R7 235 aaPredicted RBP6.89□□□□□ -1.31
CKAP4-202ENST00000552828 TRIAP1O43715 76 aa6.89□□□□□ -1.31
CKAP4-202ENST00000552828 FAM229BQ4G0N7 80 aa6.89□□□□□ -1.31
CKAP4-202ENST00000552828 HIGD2AQ9BW72 106 aa6.89□□□□□ -1.31
CKAP4-202ENST00000552828 C9JAW5 83 aa6.88□□□□□ -1.31
CKAP4-202ENST00000552828 H3BT86 120 aa6.88□□□□□ -1.31
CKAP4-202ENST00000552828 ANKRD29Q8N6D5 301 aa6.88□□□□□ -1.31
CKAP4-202ENST00000552828 ANAPC11Q9NYG5 84 aa6.88□□□□□ -1.31
CKAP4-202ENST00000552828 B5MCH6 92 aa6.87□□□□□ -1.31
CKAP4-202ENST00000552828 ZNF73O43830 326 aaPredicted RBP6.87□□□□□ -1.31
CKAP4-202ENST00000552828 TPRXLQ17RH7 258 aa6.87□□□□□ -1.31
CKAP4-202ENST00000552828 CDIP1Q9H305 208 aa6.87□□□□□ -1.31
CKAP4-202ENST00000552828 H7C2G1 150 aa6.86□□□□□ -1.31
CKAP4-202ENST00000552828 LST1O00453 97 aa6.86□□□□□ -1.31
CKAP4-202ENST00000552828 LINC00304Q8N9R0 145 aa6.86□□□□□ -1.31
CKAP4-202ENST00000552828 Q6ZRX8 168 aa6.85□□□□□ -1.31
CKAP4-202ENST00000552828 SMCR5Q8TEV8 140 aa6.85□□□□□ -1.31
CKAP4-202ENST00000552828 RETNLBQ9BQ08 111 aa6.85□□□□□ -1.31
CKAP4-202ENST00000552828 ZNF706Q9Y5V0 76 aaPredicted RBP6.85□□□□□ -1.31
CKAP4-202ENST00000552828 TRAV13-2A0A0B4J235 113 aa6.84□□□□□ -1.31
CKAP4-202ENST00000552828 KRTAP9-6A0A140TA67 174 aa6.83□□□□□ -1.32
CKAP4-202ENST00000552828 SPRR4Q96PI1 79 aa6.83□□□□□ -1.32
CKAP4-202ENST00000552828 IGLV7-46A0A075B6I9 117 aa6.82□□□□□ -1.32
CKAP4-202ENST00000552828 Q9BRP9 147 aa6.82□□□□□ -1.32
CKAP4-202ENST00000552828 C6orf99Q4VX62 202 aa6.81□□□□□ -1.32
CKAP4-202ENST00000552828 FAM240AA0A1B0GVK7 77 aa6.8□□□□□ -1.32
CKAP4-202ENST00000552828 ERC2-IT1O76042 136 aa6.8□□□□□ -1.32
CKAP4-202ENST00000552828 TRACP01848 142 aa6.8□□□□□ -1.32
CKAP4-202ENST00000552828 TRBV7-6A0A0J9YX20 115 aa6.79□□□□□ -1.32
CKAP4-202ENST00000552828 COX7BP24311 80 aa6.79□□□□□ -1.32
CKAP4-202ENST00000552828 CLEC2BQ92478 149 aa6.79□□□□□ -1.32
CKAP4-202ENST00000552828 DHRS4-AS1Q9P1J3 65 aa6.79□□□□□ -1.32
CKAP4-202ENST00000552828 A0A1B0GV72 72 aa6.78□□□□□ -1.32
CKAP4-202ENST00000552828 ELOF1P60002 83 aaKnown RBP6.78□□□□□ -1.32
CKAP4-202ENST00000552828 GAGE2AQ6NT46 116 aa6.78□□□□□ -1.32
CKAP4-202ENST00000552828 MT-ATP8P03928 68 aa6.77□□□□□ -1.33
CKAP4-202ENST00000552828 LINC00483Q53H64 154 aa6.77□□□□□ -1.33
CKAP4-202ENST00000552828 SMIM11BQ8TCY0 68 aa6.77□□□□□ -1.33
CKAP4-202ENST00000552828 TEX49A0A1B0GTD5 131 aa6.76□□□□□ -1.33
CKAP4-202ENST00000552828 SPAG11AQ6PDA7 123 aa6.76□□□□□ -1.33
CKAP4-202ENST00000552828 Q6Q795 121 aa6.76□□□□□ -1.33
CKAP4-202ENST00000552828 ACYP1P07311 99 aa6.75□□□□□ -1.33
CKAP4-202ENST00000552828 C3orf22Q8N5N4 141 aa6.75□□□□□ -1.33
CKAP4-202ENST00000552828 H0YGX0 51 aa6.74□□□□□ -1.33
CKAP4-202ENST00000552828 FP248Q71RG6 208 aaPredicted RBP6.74□□□□□ -1.33
CKAP4-202ENST00000552828 ST20-AS1Q8NBB2 130 aa6.74□□□□□ -1.33
CKAP4-202ENST00000552828 SNCGO76070 127 aa6.73□□□□□ -1.33
CKAP4-202ENST00000552828 KRTAP13-3Q3SY46 172 aa6.71□□□□□ -1.34
CKAP4-202ENST00000552828 ASB16-AS1Q495Z4 193 aa6.71□□□□□ -1.34
CKAP4-202ENST00000552828 IGLV9-49A0A0B4J1Y8 123 aa6.7□□□□□ -1.34
CKAP4-202ENST00000552828 BAALC-AS2P0C853 105 aa6.7□□□□□ -1.34
CKAP4-202ENST00000552828 SPRR1BP22528 89 aa6.7□□□□□ -1.34
CKAP4-202ENST00000552828 A0A1B0GX51 115 aa6.69□□□□□ -1.34
CKAP4-202ENST00000552828 MOBPQ13875 183 aa6.69□□□□□ -1.34
CKAP4-202ENST00000552828 SSBP3-AS1Q7Z2R9 100 aa6.69□□□□□ -1.34
CKAP4-202ENST00000552828 Q8NBF4 154 aa6.69□□□□□ -1.34
CKAP4-202ENST00000552828 DEFB105AQ8NG35 78 aa6.69□□□□□ -1.34
CKAP4-202ENST00000552828 LINC00575Q6W349 94 aa6.68□□□□□ -1.34
CKAP4-202ENST00000552828 FAM218AQ96MZ4 157 aa6.68□□□□□ -1.34
CKAP4-202ENST00000552828 LAMTOR3Q9UHA4 124 aa6.68□□□□□ -1.34
CKAP4-202ENST00000552828 TRBV7-7A0A0K0K1E9 115 aa6.67□□□□□ -1.34
CKAP4-202ENST00000552828 C9orf153Q5TBE3 101 aa6.67□□□□□ -1.34
CKAP4-202ENST00000552828 IMUPQ9GZP8 106 aa6.67□□□□□ -1.34
CKAP4-202ENST00000552828 IGLV5-48A0A075B6I7 105 aa6.66□□□□□ -1.34
CKAP4-202ENST00000552828 hADV29S1A0JD25 119 aa6.66□□□□□ -1.34
CKAP4-202ENST00000552828 DNAL4O96015 105 aa6.66□□□□□ -1.34
CKAP4-202ENST00000552828 SPINK1P00995 79 aa6.66□□□□□ -1.34
CKAP4-202ENST00000552828 KRTAP4-1Q9BYQ7 146 aa6.66□□□□□ -1.34
CKAP4-202ENST00000552828 LINC01547P58512 204 aaPredicted RBP6.65□□□□□ -1.34
CKAP4-202ENST00000552828 LINC00643Q86TS7 51 aa6.65□□□□□ -1.34
CKAP4-202ENST00000552828 OBSCN-AS1Q96MR7 158 aa6.65□□□□□ -1.34
CKAP4-202ENST00000552828 ANAPC13Q9BS18 74 aa6.64□□□□□ -1.35
CKAP4-202ENST00000552828 FSIP2Q5CZC0 6907 aa6.64□□□□□ -1.35
CKAP4-202ENST00000552828 NDUFV3P56181 108 aaKnown RBP6.63□□□□□ -1.35
CKAP4-202ENST00000552828 SEC61BP60468 96 aaKnown RBP6.63□□□□□ -1.35
CKAP4-202ENST00000552828 RPS29P62273 56 aaKnown RBP6.62□□□□□ -1.35
CKAP4-202ENST00000552828 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.62□□□□□ -1.35
CKAP4-202ENST00000552828 Q6ZQY7 126 aa6.62□□□□□ -1.35
CKAP4-202ENST00000552828 SMIM29Q86T20 159 aa6.62□□□□□ -1.35
CKAP4-202ENST00000552828 Q8N377 158 aa6.62□□□□□ -1.35
CKAP4-202ENST00000552828 ORMDL1Q9P0S3 153 aa6.61□□□□□ -1.35
CKAP4-202ENST00000552828 SVIPQ8NHG7 77 aa6.59□□□□□ -1.35
CKAP4-202ENST00000552828 F8WEM9 126 aa6.58□□□□□ -1.36
CKAP4-202ENST00000552828 JMJD7-PLA2G4BH0Y9G9 81 aa6.58□□□□□ -1.36
CKAP4-202ENST00000552828 H3BQ85 93 aa6.58□□□□□ -1.36
CKAP4-202ENST00000552828 XP32Q5T750 250 aa6.58□□□□□ -1.36
CKAP4-202ENST00000552828 CRCT1Q9UGL9 99 aa6.57□□□□□ -1.36
CKAP4-202ENST00000552828 TMEM256-PLSCR3K7ERE1 68 aa6.56□□□□□ -1.36
CKAP4-202ENST00000552828 LCE2CQ5TA81 110 aa6.56□□□□□ -1.36
CKAP4-202ENST00000552828 CD164Q04900 197 aa6.55□□□□□ -1.36
CKAP4-202ENST00000552828 Q6JHZ5 121 aa6.55□□□□□ -1.36
CKAP4-202ENST00000552828 HRCT1Q6UXD1 115 aa6.55□□□□□ -1.36
CKAP4-202ENST00000552828 CCKP06307 115 aa6.54□□□□□ -1.36
CKAP4-202ENST00000552828 LIMD2Q9BT23 127 aa6.53□□□□□ -1.36
CKAP4-202ENST00000552828 C14orf132Q9NPU4 83 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms