RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 JMJD1CQ15652 2540 aa2.05□□□□□ -2.08
USP44-208ENST00000552440 KNL1Q8NG31 2342 aa2.05□□□□□ -2.08
USP44-208ENST00000552440 DCHS2Q6V1P9 2916 aa2.05□□□□□ -2.08
USP44-208ENST00000552440 RP1L1Q8IWN7 2480 aaPredicted RBP2.05□□□□□ -2.08
USP44-208ENST00000552440 HMGA1P17096 107 aaKnown RBP2.05□□□□□ -2.08
USP44-208ENST00000552440 CCL19Q99731 98 aa2.05□□□□□ -2.08
USP44-208ENST00000552440 LINC00472Q9H8W2 130 aa2.05□□□□□ -2.08
USP44-208ENST00000552440 ANKRD36A6QL64 1941 aa2.05□□□□□ -2.08
USP44-208ENST00000552440 CUBNO60494 3623 aa2.04□□□□□ -2.08
USP44-208ENST00000552440 NOTCH1P46531 2555 aa2.04□□□□□ -2.08
USP44-208ENST00000552440 A0A1B0GUT8 65 aa2.04□□□□□ -2.08
USP44-208ENST00000552440 H0Y9P7 68 aa2.04□□□□□ -2.08
USP44-208ENST00000552440 SPATA8Q6RVD6 105 aa2.04□□□□□ -2.08
USP44-208ENST00000552440 ACYP2P14621 99 aa2.03□□□□□ -2.08
USP44-208ENST00000552440 ATXN8Q156A1 80 aa2.03□□□□□ -2.08
USP44-208ENST00000552440 VPS13CQ709C8 3753 aa2.03□□□□□ -2.08
USP44-208ENST00000552440 SPINK7P58062 85 aa2.03□□□□□ -2.09
USP44-208ENST00000552440 TMEM263Q8WUH6 116 aaKnown RBP2.03□□□□□ -2.09
USP44-208ENST00000552440 OBSCN-AS1Q96MR7 158 aa2.03□□□□□ -2.09
USP44-208ENST00000552440 U3KQA8 63 aa2.03□□□□□ -2.09
USP44-208ENST00000552440 ACANP16112 2415 aa2.02□□□□□ -2.09
USP44-208ENST00000552440 PRRC2CQ9Y520 2896 aaKnown RBP2.02□□□□□ -2.09
USP44-208ENST00000552440 IFI6P09912 130 aa2.02□□□□□ -2.09
USP44-208ENST00000552440 COX6B1P14854 86 aa2.02□□□□□ -2.09
USP44-208ENST00000552440 FAM103A1Q9BTL3 118 aaKnown RBP2.02□□□□□ -2.09
USP44-208ENST00000552440 MXRA5Q9NR99 2828 aa2.01□□□□□ -2.09
USP44-208ENST00000552440 PP632Q6XCG6 107 aa2.01□□□□□ -2.09
USP44-208ENST00000552440 ZCCHC13Q8WW36 166 aaKnown RBP2.01□□□□□ -2.09
USP44-208ENST00000552440 MAP1AP78559 2803 aaPredicted RBP2.01□□□□□ -2.09
USP44-208ENST00000552440 NBEAL2Q6ZNJ1 2754 aa2.01□□□□□ -2.09
USP44-208ENST00000552440 NSD1Q96L73 2696 aaPredicted RBP2.01□□□□□ -2.09
USP44-208ENST00000552440 ANK2Q01484 3957 aa2.01□□□□□ -2.09
USP44-208ENST00000552440 FLNAP21333 2647 aaKnown RBP2.01□□□□□ -2.09
USP44-208ENST00000552440 MEGF8Q7Z7M0 2845 aa2.01□□□□□ -2.09
USP44-208ENST00000552440 DEFB109BQ30KR1 87 aa2.01□□□□□ -2.09
USP44-208ENST00000552440 NDUFB1O75438 58 aa2□□□□□ -2.09
USP44-208ENST00000552440 PRB2P02812 416 aaPredicted RBP2□□□□□ -2.09
USP44-208ENST00000552440 C10orf113Q5VZT2 155 aa2□□□□□ -2.09
USP44-208ENST00000552440 RYR3Q15413 4870 aa2□□□□□ -2.09
USP44-208ENST00000552440 DNAJC13O75165 2243 aa1.99□□□□□ -2.09
USP44-208ENST00000552440 TGP01266 2768 aa1.99□□□□□ -2.09
USP44-208ENST00000552440 TLN2Q9Y4G6 2542 aa1.99□□□□□ -2.09
USP44-208ENST00000552440 KMT2CQ8NEZ4 4911 aaKnown RBP1.99□□□□□ -2.09
USP44-208ENST00000552440 C10orf99Q6UWK7 81 aa1.99□□□□□ -2.09
USP44-208ENST00000552440 SMR3AQ99954 134 aa1.99□□□□□ -2.09
USP44-208ENST00000552440 A0A0D9SFI3 127 aa1.98□□□□□ -2.09
USP44-208ENST00000552440 PKDREJQ9NTG1 2253 aa1.98□□□□□ -2.09
USP44-208ENST00000552440 J3QRE1 110 aa1.98□□□□□ -2.09
USP44-208ENST00000552440 KRTAP13-4Q3LI77 160 aa1.98□□□□□ -2.09
USP44-208ENST00000552440 UNQ6190/PRO20217Q6UXQ8 127 aa1.98□□□□□ -2.09
USP44-208ENST00000552440 TRAV21A0A0B4J279 112 aa1.97□□□□□ -2.09
USP44-208ENST00000552440 SPTY2D1-AS1A0A0U1RR47 76 aa1.97□□□□□ -2.09
USP44-208ENST00000552440 SPRR5A0A1B0GTR4 108 aa1.97□□□□□ -2.09
USP44-208ENST00000552440 DEFB133Q30KQ1 61 aa1.97□□□□□ -2.09
USP44-208ENST00000552440 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.97□□□□□ -2.09
USP44-208ENST00000552440 FXYD6Q9H0Q3 95 aa1.97□□□□□ -2.09
USP44-208ENST00000552440 BIRC6Q9NR09 4857 aa1.96□□□□□ -2.09
USP44-208ENST00000552440 SNRPGP15A8MWD9 76 aa1.96□□□□□ -2.1
USP44-208ENST00000552440 HIVEP2P31629 2446 aa1.96□□□□□ -2.1
USP44-208ENST00000552440 TRBV30A0A0K0K1B3 111 aa1.96□□□□□ -2.1
USP44-208ENST00000552440 NREPQ16612 68 aa1.96□□□□□ -2.1
USP44-208ENST00000552440 A0A096LNT2 108 aa1.95□□□□□ -2.1
USP44-208ENST00000552440 LINC01549A6NIU2 74 aa1.95□□□□□ -2.1
USP44-208ENST00000552440 Q6ZRX8 168 aa1.95□□□□□ -2.1
USP44-208ENST00000552440 SMIM11BQ8TCY0 68 aa1.95□□□□□ -2.1
USP44-208ENST00000552440 PLAC4Q8WY50 150 aa1.95□□□□□ -2.1
USP44-208ENST00000552440 NCOA6Q14686 2063 aaPredicted RBP1.95□□□□□ -2.1
USP44-208ENST00000552440 PCLOQ9Y6V0 5065 aa1.95□□□□□ -2.1
USP44-208ENST00000552440 WFDC9Q8NEX5 89 aa1.94□□□□□ -2.1
USP44-208ENST00000552440 SVEP1Q4LDE5 3571 aa1.94□□□□□ -2.1
USP44-208ENST00000552440 LCE6AA0A183 80 aa1.94□□□□□ -2.1
USP44-208ENST00000552440 G3V318 75 aa1.94□□□□□ -2.1
USP44-208ENST00000552440 DEFB112Q30KQ8 113 aa1.94□□□□□ -2.1
USP44-208ENST00000552440 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.93□□□□□ -2.1
USP44-208ENST00000552440 EPPK1P58107 5090 aaKnown RBP1.93□□□□□ -2.1
USP44-208ENST00000552440 GVQW2A0A096LPI5 108 aaPredicted RBP1.93□□□□□ -2.1
USP44-208ENST00000552440 TRBV6-1A0A0K0K1D8 114 aa1.93□□□□□ -2.1
USP44-208ENST00000552440 BRD3OSQ6XYD6 125 aa1.93□□□□□ -2.1
USP44-208ENST00000552440 INTS1Q8N201 2190 aaKnown RBP1.92□□□□□ -2.1
USP44-208ENST00000552440 MGAM2Q2M2H8 2515 aa1.92□□□□□ -2.1
USP44-208ENST00000552440 A0A1B0GU69 56 aa1.92□□□□□ -2.1
USP44-208ENST00000552440 GAFA1Q96PS6 74 aa1.92□□□□□ -2.1
USP44-208ENST00000552440 HYDINQ4G0P3 5121 aa1.92□□□□□ -2.1
USP44-208ENST00000552440 LINC00959A0A1B0GUT2 108 aa1.91□□□□□ -2.1
USP44-208ENST00000552440 TRRAPQ9Y4A5 3859 aa1.91□□□□□ -2.1
USP44-208ENST00000552440 ANK3Q12955 4377 aaKnown RBP1.91□□□□□ -2.1
USP44-208ENST00000552440 SONP18583 2426 aaKnown RBP1.91□□□□□ -2.1
USP44-208ENST00000552440 NCR3O14931 201 aa1.91□□□□□ -2.1
USP44-208ENST00000552440 HAMPP81172 84 aa1.91□□□□□ -2.1
USP44-208ENST00000552440 TFF3Q07654 80 aa1.91□□□□□ -2.1
USP44-208ENST00000552440 LINC00575Q6W349 94 aa1.91□□□□□ -2.1
USP44-208ENST00000552440 PRKDCP78527 4128 aaKnown RBP1.9□□□□□ -2.1
USP44-208ENST00000552440 ZANQ9Y493 2812 aa1.9□□□□□ -2.1
USP44-208ENST00000552440 WNK1Q9H4A3 2382 aa1.9□□□□□ -2.11
USP44-208ENST00000552440 RYR1P21817 5038 aa1.9□□□□□ -2.11
USP44-208ENST00000552440 SPINK13Q1W4C9 94 aa1.89□□□□□ -2.11
USP44-208ENST00000552440 LY6G6CO95867 125 aa1.89□□□□□ -2.11
USP44-208ENST00000552440 ENHOQ6UWT2 76 aa1.89□□□□□ -2.11
USP44-208ENST00000552440 PCOTHQ58A44 107 aa1.88□□□□□ -2.11
USP44-208ENST00000552440 CNTRLQ7Z7A1 2325 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms