RNA–Protein interactions for RNA: ENST00000550678.1

LINC02388-201, Transcript of long intergenic non-protein coding RNA 2388, humanhuman

TSL 2 BASIC

Gene LINC02388, Length 1,975 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02388-201ENST00000550678 DEFB136Q30KP8 78 aa3.9□□□□□ -1.79
LINC02388-201ENST00000550678 LRBAP50851 2863 aa3.89□□□□□ -1.79
LINC02388-201ENST00000550678 SPTA1P02549 2419 aa3.89□□□□□ -1.79
LINC02388-201ENST00000550678 DEFB105AQ8NG35 78 aa3.89□□□□□ -1.79
LINC02388-201ENST00000550678 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.89□□□□□ -1.79
LINC02388-201ENST00000550678 A0A1B0GU33 70 aa3.89□□□□□ -1.79
LINC02388-201ENST00000550678 BOD1L1Q8NFC6 3051 aa3.88□□□□□ -1.79
LINC02388-201ENST00000550678 IGKV2D-24A0A075B6R9 120 aa3.88□□□□□ -1.79
LINC02388-201ENST00000550678 A0A087WTM6 91 aa3.88□□□□□ -1.79
LINC02388-201ENST00000550678 ANGP03950 147 aaKnown RBP3.88□□□□□ -1.79
LINC02388-201ENST00000550678 SPINT4Q6UDR6 99 aa3.88□□□□□ -1.79
LINC02388-201ENST00000550678 C6orf48Q9UBA6 75 aa3.88□□□□□ -1.79
LINC02388-201ENST00000550678 SPTAN1Q13813 2472 aaKnown RBP3.88□□□□□ -1.79
LINC02388-201ENST00000550678 ATRXP46100 2492 aa3.87□□□□□ -1.79
LINC02388-201ENST00000550678 SVEP1Q4LDE5 3571 aa3.87□□□□□ -1.79
LINC02388-201ENST00000550678 BAHCC1Q9P281 2608 aa3.87□□□□□ -1.79
LINC02388-201ENST00000550678 DEFB116Q30KQ4 102 aa3.87□□□□□ -1.79
LINC02388-201ENST00000550678 WFDC13Q8IUB5 93 aa3.87□□□□□ -1.79
LINC02388-201ENST00000550678 LINC00472Q9H8W2 130 aa3.87□□□□□ -1.79
LINC02388-201ENST00000550678 ANKRD17O75179 2603 aaKnown RBP3.86□□□□□ -1.79
LINC02388-201ENST00000550678 IGSF10Q6WRI0 2623 aa3.86□□□□□ -1.79
LINC02388-201ENST00000550678 A0A096LPF7 62 aa3.85□□□□□ -1.79
LINC02388-201ENST00000550678 KRTAP29-1A8MX34 341 aaPredicted RBP3.85□□□□□ -1.79
LINC02388-201ENST00000550678 IGLV7-43P04211 117 aa3.85□□□□□ -1.79
LINC02388-201ENST00000550678 C4orf3Q8WVX3 66 aa3.85□□□□□ -1.79
LINC02388-201ENST00000550678 RELNP78509 3460 aa3.85□□□□□ -1.79
LINC02388-201ENST00000550678 HRNRQ86YZ3 2850 aaPredicted RBP3.85□□□□□ -1.79
LINC02388-201ENST00000550678 DEFB130BP0DP73 79 aa3.85□□□□□ -1.79
LINC02388-201ENST00000550678 DEFB130AP0DP74 79 aa3.85□□□□□ -1.79
LINC02388-201ENST00000550678 WFDC10BQ8IUB3 73 aa3.85□□□□□ -1.79
LINC02388-201ENST00000550678 ABCA2Q9BZC7 2435 aa3.84□□□□□ -1.79
LINC02388-201ENST00000550678 ITPR1Q14643 2758 aa3.84□□□□□ -1.79
LINC02388-201ENST00000550678 PRO0255Q9UI72 69 aa3.83□□□□□ -1.8
LINC02388-201ENST00000550678 ZFYVE26Q68DK2 2539 aa3.83□□□□□ -1.8
LINC02388-201ENST00000550678 NOTCH3Q9UM47 2321 aa3.83□□□□□ -1.8
LINC02388-201ENST00000550678 MAP1AP78559 2803 aaPredicted RBP3.81□□□□□ -1.8
LINC02388-201ENST00000550678 FASNP49327 2511 aaKnown RBP3.81□□□□□ -1.8
LINC02388-201ENST00000550678 GCN1Q92616 2671 aaKnown RBP3.8□□□□□ -1.8
LINC02388-201ENST00000550678 Q6ZRX8 168 aa3.8□□□□□ -1.8
LINC02388-201ENST00000550678 ASH1LQ9NR48 2969 aaKnown RBP3.8□□□□□ -1.8
LINC02388-201ENST00000550678 NBDYA0A0U1RRE5 68 aa3.8□□□□□ -1.8
LINC02388-201ENST00000550678 RPL37AP61513 92 aaKnown RBP3.79□□□□□ -1.8
LINC02388-201ENST00000550678 MYO18BQ8IUG5 2567 aa3.79□□□□□ -1.8
LINC02388-201ENST00000550678 BSNQ9UPA5 3926 aa3.79□□□□□ -1.8
LINC02388-201ENST00000550678 HELZ2Q9BYK8 2649 aaKnown RBP3.78□□□□□ -1.8
LINC02388-201ENST00000550678 ZNF462Q96JM2 2506 aa3.78□□□□□ -1.8
LINC02388-201ENST00000550678 A0A1B0GU69 56 aa3.78□□□□□ -1.8
LINC02388-201ENST00000550678 HRES1P13985 223 aa3.78□□□□□ -1.8
LINC02388-201ENST00000550678 Q96NJ1 140 aa3.78□□□□□ -1.8
LINC02388-201ENST00000550678 ATMQ13315 3056 aa3.78□□□□□ -1.8
LINC02388-201ENST00000550678 PCOTHQ58A44 107 aa3.78□□□□□ -1.8
LINC02388-201ENST00000550678 COL12A1Q99715 3063 aa3.77□□□□□ -1.81
LINC02388-201ENST00000550678 LELP1Q5T871 98 aa3.77□□□□□ -1.81
LINC02388-201ENST00000550678 KRTAP19-4Q3LI73 84 aa3.76□□□□□ -1.81
LINC02388-201ENST00000550678 IGFL1Q6UW32 110 aa3.76□□□□□ -1.81
LINC02388-201ENST00000550678 UBR5O95071 2799 aaPredicted RBP3.76□□□□□ -1.81
LINC02388-201ENST00000550678 SPRR1AP35321 89 aa3.76□□□□□ -1.81
LINC02388-201ENST00000550678 CELSR1Q9NYQ6 3014 aa3.75□□□□□ -1.81
LINC02388-201ENST00000550678 A0A0G2JQZ4 141 aa3.75□□□□□ -1.81
LINC02388-201ENST00000550678 A0A1W2PNN7 141 aa3.75□□□□□ -1.81
LINC02388-201ENST00000550678 CCL19Q99731 98 aa3.75□□□□□ -1.81
LINC02388-201ENST00000550678 TLN1Q9Y490 2541 aaKnown RBP3.75□□□□□ -1.81
LINC02388-201ENST00000550678 SPG11Q96JI7 2443 aa3.75□□□□□ -1.81
LINC02388-201ENST00000550678 CSPG4Q6UVK1 2322 aa3.75□□□□□ -1.81
LINC02388-201ENST00000550678 CFAP46Q8IYW2 2715 aa3.75□□□□□ -1.81
LINC02388-201ENST00000550678 LINC00304Q8N9R0 145 aa3.74□□□□□ -1.81
LINC02388-201ENST00000550678 DEFB131BA0A096LNP1 70 aa3.74□□□□□ -1.81
LINC02388-201ENST00000550678 TYMSOSQ8TAI1 123 aa3.74□□□□□ -1.81
LINC02388-201ENST00000550678 MMP24-AS1A0A0U1RRL7 71 aa3.73□□□□□ -1.81
LINC02388-201ENST00000550678 TP53AIP1Q9HCN2 124 aa3.73□□□□□ -1.81
LINC02388-201ENST00000550678 NBPF19A0A087WUL8 3843 aa3.73□□□□□ -1.81
LINC02388-201ENST00000550678 TENM4Q6N022 2769 aa3.72□□□□□ -1.81
LINC02388-201ENST00000550678 IGKV2-24A0A0C4DH68 120 aa3.72□□□□□ -1.81
LINC02388-201ENST00000550678 PRO2289Q9P1D8 64 aa3.72□□□□□ -1.81
LINC02388-201ENST00000550678 PTPN13Q12923 2485 aa3.72□□□□□ -1.81
LINC02388-201ENST00000550678 FAM168BA1KXE4 195 aa3.71□□□□□ -1.82
LINC02388-201ENST00000550678 FLNBO75369 2602 aaKnown RBP3.7□□□□□ -1.82
LINC02388-201ENST00000550678 LCE5AQ5TCM9 118 aa3.7□□□□□ -1.82
LINC02388-201ENST00000550678 R4GN34 69 aa3.7□□□□□ -1.82
LINC02388-201ENST00000550678 SETXQ7Z333 2677 aaKnown RBP3.7□□□□□ -1.82
LINC02388-201ENST00000550678 NBASA2RRP1 2371 aa3.69□□□□□ -1.82
LINC02388-201ENST00000550678 JMJD1CQ15652 2540 aa3.69□□□□□ -1.82
LINC02388-201ENST00000550678 DEFB4AO15263 64 aa3.69□□□□□ -1.82
LINC02388-201ENST00000550678 TLN2Q9Y4G6 2542 aa3.68□□□□□ -1.82
LINC02388-201ENST00000550678 LRRK2Q5S007 2527 aa3.68□□□□□ -1.82
LINC02388-201ENST00000550678 IGKV2-30P06310 120 aa3.68□□□□□ -1.82
LINC02388-201ENST00000550678 MAST4O15021 2626 aa3.67□□□□□ -1.82
LINC02388-201ENST00000550678 DOPEY1Q5JWR5 2465 aa3.67□□□□□ -1.82
LINC02388-201ENST00000550678 KRTAP7-1Q8IUC3 87 aa3.67□□□□□ -1.82
LINC02388-201ENST00000550678 AKAP9Q99996 3911 aa3.67□□□□□ -1.82
LINC02388-201ENST00000550678 HECTD1Q9ULT8 2610 aa3.67□□□□□ -1.82
LINC02388-201ENST00000550678 CRYBG3Q68DQ2 2970 aa3.67□□□□□ -1.82
LINC02388-201ENST00000550678 HTN3P15516 51 aa3.67□□□□□ -1.82
LINC02388-201ENST00000550678 MAPK1IP1LQ8NDC0 245 aa3.67□□□□□ -1.82
LINC02388-201ENST00000550678 USP9YO00507 2555 aaPredicted RBP3.67□□□□□ -1.82
LINC02388-201ENST00000550678 HIVEP3Q5T1R4 2406 aa3.66□□□□□ -1.82
LINC02388-201ENST00000550678 NAV2Q8IVL1 2488 aa3.66□□□□□ -1.82
LINC02388-201ENST00000550678 ACYP2P14621 99 aa3.66□□□□□ -1.82
LINC02388-201ENST00000550678 FN1P02751 2386 aaKnown RBP3.66□□□□□ -1.82
LINC02388-201ENST00000550678 SSBP3-AS1Q7Z2R9 100 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms