RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 DEFB116Q30KQ4 102 aa8.73□□□□□ -1.01
HDAC7-228ENST00000548938 CD164Q04900 197 aa8.73□□□□□ -1.01
HDAC7-228ENST00000548938 C11orf45Q8TAV5 145 aa8.71□□□□□ -1.01
HDAC7-228ENST00000548938 DNAH1Q9P2D7 4330 aa8.7□□□□□ -1.02
HDAC7-228ENST00000548938 IGFL1Q6UW32 110 aa8.7□□□□□ -1.02
HDAC7-228ENST00000548938 WFDC13Q8IUB5 93 aa8.7□□□□□ -1.02
HDAC7-228ENST00000548938 MDFIQ99750 246 aa8.7□□□□□ -1.02
HDAC7-228ENST00000548938 Q1T7F1 81 aa8.69□□□□□ -1.02
HDAC7-228ENST00000548938 REG3GQ6UW15 175 aa8.69□□□□□ -1.02
HDAC7-228ENST00000548938 PRR15Q8IV56 129 aa8.69□□□□□ -1.02
HDAC7-228ENST00000548938 K7EIL1 84 aa8.68□□□□□ -1.02
HDAC7-228ENST00000548938 CYP4F30PQ9H0H9 118 aa8.67□□□□□ -1.02
HDAC7-228ENST00000548938 LINC00588Q9Y4M8 146 aa8.67□□□□□ -1.02
HDAC7-228ENST00000548938 PSPHP1O15172 72 aa8.67□□□□□ -1.02
HDAC7-228ENST00000548938 A0A087WSZ3 146 aa8.67□□□□□ -1.02
HDAC7-228ENST00000548938 PRLHP81277 87 aa8.66□□□□□ -1.02
HDAC7-228ENST00000548938 RPL37AP61513 92 aaKnown RBP8.65□□□□□ -1.02
HDAC7-228ENST00000548938 TRAV22A0A0B4J277 110 aa8.65□□□□□ -1.03
HDAC7-228ENST00000548938 HUWE1Q7Z6Z7 4374 aaKnown RBP8.63□□□□□ -1.03
HDAC7-228ENST00000548938 SRRM2Q9UQ35 2752 aaKnown RBP8.63□□□□□ -1.03
HDAC7-228ENST00000548938 MP68P56378 58 aa8.62□□□□□ -1.03
HDAC7-228ENST00000548938 LINC00208Q96KT6 92 aa8.62□□□□□ -1.03
HDAC7-228ENST00000548938 NDUFB1O75438 58 aa8.62□□□□□ -1.03
HDAC7-228ENST00000548938 IGKV2-24A0A0C4DH68 120 aa8.6□□□□□ -1.03
HDAC7-228ENST00000548938 DNAH10Q8IVF4 4471 aa8.6□□□□□ -1.03
HDAC7-228ENST00000548938 IGLV8-61A0A075B6I0 122 aa8.6□□□□□ -1.03
HDAC7-228ENST00000548938 KRTAP29-1A8MX34 341 aaPredicted RBP8.6□□□□□ -1.03
HDAC7-228ENST00000548938 C4orf48Q5BLP8 95 aa8.6□□□□□ -1.03
HDAC7-228ENST00000548938 A0A096LNI7 61 aa8.59□□□□□ -1.03
HDAC7-228ENST00000548938 A8MUN3 132 aa8.58□□□□□ -1.04
HDAC7-228ENST00000548938 STAB2Q8WWQ8 2551 aa8.58□□□□□ -1.04
HDAC7-228ENST00000548938 B9D2Q9BPU9 175 aa8.58□□□□□ -1.04
HDAC7-228ENST00000548938 H0Y9P7 68 aa8.57□□□□□ -1.04
HDAC7-228ENST00000548938 UBE2AP49459 152 aa8.57□□□□□ -1.04
HDAC7-228ENST00000548938 CASC2Q6XLA1 102 aa8.56□□□□□ -1.04
HDAC7-228ENST00000548938 CNBPP62633 177 aaKnown RBP8.55□□□□□ -1.04
HDAC7-228ENST00000548938 LYSTQ99698 3801 aa8.55□□□□□ -1.04
HDAC7-228ENST00000548938 COL7A1Q02388 2944 aa8.54□□□□□ -1.04
HDAC7-228ENST00000548938 C16orf90A8MZG2 172 aa8.53□□□□□ -1.04
HDAC7-228ENST00000548938 KRTAP11-1Q8IUC1 163 aa8.53□□□□□ -1.04
HDAC7-228ENST00000548938 A8MU10 97 aa8.52□□□□□ -1.05
HDAC7-228ENST00000548938 DNAH9Q9NYC9 4486 aa8.52□□□□□ -1.05
HDAC7-228ENST00000548938 Q5VV11 94 aa8.52□□□□□ -1.05
HDAC7-228ENST00000548938 SPANXA2-OT1Q8N9U9 137 aa8.51□□□□□ -1.05
HDAC7-228ENST00000548938 A8MWP4 228 aa8.51□□□□□ -1.05
HDAC7-228ENST00000548938 LINC00472Q9H8W2 130 aa8.5□□□□□ -1.05
HDAC7-228ENST00000548938 PHF5AQ7RTV0 110 aaKnown RBP8.5□□□□□ -1.05
HDAC7-228ENST00000548938 KRTAP1-5Q9BYS1 174 aa8.5□□□□□ -1.05
HDAC7-228ENST00000548938 H3BPC8 53 aa8.49□□□□□ -1.05
HDAC7-228ENST00000548938 CHTF8P0CG12 524 aa8.49□□□□□ -1.05
HDAC7-228ENST00000548938 Q8N9P0 234 aaPredicted RBP8.48□□□□□ -1.05
HDAC7-228ENST00000548938 C9orf163Q8N9P6 203 aa8.47□□□□□ -1.05
HDAC7-228ENST00000548938 RBM12B-AS1Q9P1G2 102 aa8.47□□□□□ -1.05
HDAC7-228ENST00000548938 CSMD3Q7Z407 3707 aa8.47□□□□□ -1.05
HDAC7-228ENST00000548938 SPRR1BP22528 89 aa8.46□□□□□ -1.06
HDAC7-228ENST00000548938 H0Y9J4 135 aa8.45□□□□□ -1.06
HDAC7-228ENST00000548938 MMP24-AS1A0A0U1RRL7 71 aa8.45□□□□□ -1.06
HDAC7-228ENST00000548938 PRR15LQ9BU68 103 aa8.44□□□□□ -1.06
HDAC7-228ENST00000548938 CHKB-CPT1BH3BT56 60 aa8.44□□□□□ -1.06
HDAC7-228ENST00000548938 LIMD2Q9BT23 127 aa8.43□□□□□ -1.06
HDAC7-228ENST00000548938 TENM2Q9NT68 2774 aa8.42□□□□□ -1.06
HDAC7-228ENST00000548938 DNHD1Q96M86 4753 aa8.41□□□□□ -1.06
HDAC7-228ENST00000548938 COA5Q86WW8 74 aa8.41□□□□□ -1.06
HDAC7-228ENST00000548938 KTN1-AS1Q86SY8 53 aa8.4□□□□□ -1.06
HDAC7-228ENST00000548938 PRKDCP78527 4128 aaKnown RBP8.4□□□□□ -1.07
HDAC7-228ENST00000548938 PCOTHQ58A44 107 aa8.39□□□□□ -1.07
HDAC7-228ENST00000548938 IGLV7-46A0A075B6I9 117 aa8.38□□□□□ -1.07
HDAC7-228ENST00000548938 MEGF8Q7Z7M0 2845 aa8.37□□□□□ -1.07
HDAC7-228ENST00000548938 Q96NJ1 140 aa8.35□□□□□ -1.07
HDAC7-228ENST00000548938 APLNQ9ULZ1 77 aa8.35□□□□□ -1.07
HDAC7-228ENST00000548938 DYNC2H1Q8NCM8 4307 aaKnown RBP8.34□□□□□ -1.07
HDAC7-228ENST00000548938 IGLV9-49A0A0B4J1Y8 123 aa8.34□□□□□ -1.07
HDAC7-228ENST00000548938 PANO1I0J062 215 aa8.34□□□□□ -1.07
HDAC7-228ENST00000548938 Q75L30 129 aa8.34□□□□□ -1.07
HDAC7-228ENST00000548938 LCA10Q71F78 164 aa8.33□□□□□ -1.08
HDAC7-228ENST00000548938 DNAH7Q8WXX0 4024 aa8.33□□□□□ -1.08
HDAC7-228ENST00000548938 KRTAP13-1Q8IUC0 172 aa8.33□□□□□ -1.08
HDAC7-228ENST00000548938 LOC101927531A0A1B0GV80 90 aa8.32□□□□□ -1.08
HDAC7-228ENST00000548938 ASB16-AS1Q495Z4 193 aa8.32□□□□□ -1.08
HDAC7-228ENST00000548938 C14orf177Q52M58 125 aa8.32□□□□□ -1.08
HDAC7-228ENST00000548938 UBE2DNLQ8IWF7 75 aa8.32□□□□□ -1.08
HDAC7-228ENST00000548938 SPTSSBQ8NFR3 76 aa8.32□□□□□ -1.08
HDAC7-228ENST00000548938 A6NED7 52 aa8.32□□□□□ -1.08
HDAC7-228ENST00000548938 MOBPQ13875 183 aa8.31□□□□□ -1.08
HDAC7-228ENST00000548938 C8orf17Q9NRJ1 99 aa8.31□□□□□ -1.08
HDAC7-228ENST00000548938 TP53AIP1Q9HCN2 124 aa8.3□□□□□ -1.08
HDAC7-228ENST00000548938 NDUFS5O43920 106 aa8.28□□□□□ -1.08
HDAC7-228ENST00000548938 SPAG11AQ6PDA7 123 aa8.28□□□□□ -1.08
HDAC7-228ENST00000548938 Q6ZR54 194 aa8.28□□□□□ -1.08
HDAC7-228ENST00000548938 PLECQ15149 4684 aaKnown RBP8.28□□□□□ -1.08
HDAC7-228ENST00000548938 IGHV6-1A0A0B4J1U7 121 aa8.28□□□□□ -1.08
HDAC7-228ENST00000548938 NUPR2A6NF83 97 aa8.27□□□□□ -1.09
HDAC7-228ENST00000548938 H3BS24 57 aa8.26□□□□□ -1.09
HDAC7-228ENST00000548938 ATP11AUNQ6ZP68 121 aa8.25□□□□□ -1.09
HDAC7-228ENST00000548938 A0A1B0GVX0 72 aa8.24□□□□□ -1.09
HDAC7-228ENST00000548938 C8orf87E5RJ46 101 aa8.24□□□□□ -1.09
HDAC7-228ENST00000548938 LINC01558Q9Y6Z2 57 aa8.24□□□□□ -1.09
HDAC7-228ENST00000548938 HRES1P13985 223 aa8.23□□□□□ -1.09
HDAC7-228ENST00000548938 PLAC8Q9NZF1 115 aa8.23□□□□□ -1.09
HDAC7-228ENST00000548938 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms