RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 ANAPC11Q9NYG5 84 aa8.6□□□□□ -1.03
PRPF40B-209ENST00000548825 SPRR1AP35321 89 aa8.59□□□□□ -1.04
PRPF40B-209ENST00000548825 DSCR10P59022 87 aa8.57□□□□□ -1.04
PRPF40B-209ENST00000548825 KLKP1Q107X0 134 aa8.57□□□□□ -1.04
PRPF40B-209ENST00000548825 APLNQ9ULZ1 77 aa8.57□□□□□ -1.04
PRPF40B-209ENST00000548825 PLA2G2DQ9UNK4 145 aa8.56□□□□□ -1.04
PRPF40B-209ENST00000548825 OCR1Q9BZK8 76 aa8.55□□□□□ -1.04
PRPF40B-209ENST00000548825 NBDYA0A0U1RRE5 68 aa8.54□□□□□ -1.04
PRPF40B-209ENST00000548825 RPS28P62857 69 aaKnown RBP8.54□□□□□ -1.04
PRPF40B-209ENST00000548825 B9D2Q9BPU9 175 aa8.54□□□□□ -1.04
PRPF40B-209ENST00000548825 DNAH9Q9NYC9 4486 aa8.53□□□□□ -1.04
PRPF40B-209ENST00000548825 IGLV5-37A0A075B6J1 123 aa8.53□□□□□ -1.04
PRPF40B-209ENST00000548825 TNP2Q05952 138 aa8.53□□□□□ -1.04
PRPF40B-209ENST00000548825 HCG22E2RYF7 251 aa8.53□□□□□ -1.04
PRPF40B-209ENST00000548825 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.52□□□□□ -1.04
PRPF40B-209ENST00000548825 DNAH7Q8WXX0 4024 aa8.52□□□□□ -1.05
PRPF40B-209ENST00000548825 SERP1Q9Y6X1 66 aa8.52□□□□□ -1.05
PRPF40B-209ENST00000548825 V9GYY9 64 aa8.52□□□□□ -1.05
PRPF40B-209ENST00000548825 FBN3Q75N90 2809 aa8.52□□□□□ -1.05
PRPF40B-209ENST00000548825 C14orf177Q52M58 125 aa8.52□□□□□ -1.05
PRPF40B-209ENST00000548825 LINC00208Q96KT6 92 aa8.51□□□□□ -1.05
PRPF40B-209ENST00000548825 NDUFS5O43920 106 aa8.5□□□□□ -1.05
PRPF40B-209ENST00000548825 SPINK6Q6UWN8 80 aa8.5□□□□□ -1.05
PRPF40B-209ENST00000548825 FAM229BQ4G0N7 80 aa8.49□□□□□ -1.05
PRPF40B-209ENST00000548825 CNBPP62633 177 aaKnown RBP8.49□□□□□ -1.05
PRPF40B-209ENST00000548825 Q5XG85 94 aa8.49□□□□□ -1.05
PRPF40B-209ENST00000548825 C9orf163Q8N9P6 203 aa8.48□□□□□ -1.05
PRPF40B-209ENST00000548825 LY6G6CO95867 125 aa8.48□□□□□ -1.05
PRPF40B-209ENST00000548825 SPRR4Q96PI1 79 aa8.47□□□□□ -1.05
PRPF40B-209ENST00000548825 MEGF8Q7Z7M0 2845 aa8.47□□□□□ -1.05
PRPF40B-209ENST00000548825 PLECQ15149 4684 aaKnown RBP8.47□□□□□ -1.05
PRPF40B-209ENST00000548825 BCE1O60756 84 aa8.46□□□□□ -1.05
PRPF40B-209ENST00000548825 A0A0U1RQV1 116 aa8.46□□□□□ -1.06
PRPF40B-209ENST00000548825 NDUFC1O43677 76 aa8.46□□□□□ -1.06
PRPF40B-209ENST00000548825 CASC2Q6XLA1 102 aa8.46□□□□□ -1.06
PRPF40B-209ENST00000548825 BRK1Q8WUW1 75 aa8.45□□□□□ -1.06
PRPF40B-209ENST00000548825 MP68P56378 58 aa8.44□□□□□ -1.06
PRPF40B-209ENST00000548825 NUPR2A6NF83 97 aa8.44□□□□□ -1.06
PRPF40B-209ENST00000548825 MOBPQ13875 183 aa8.43□□□□□ -1.06
PRPF40B-209ENST00000548825 FP248Q71RG6 208 aaPredicted RBP8.42□□□□□ -1.06
PRPF40B-209ENST00000548825 SMIM26A0A096LP01 95 aa8.42□□□□□ -1.06
PRPF40B-209ENST00000548825 IGHV6-1A0A0B4J1U7 121 aa8.42□□□□□ -1.06
PRPF40B-209ENST00000548825 PCOTHQ58A44 107 aa8.42□□□□□ -1.06
PRPF40B-209ENST00000548825 RTL8CO15255 209 aa8.41□□□□□ -1.06
PRPF40B-209ENST00000548825 LINC00336Q6ZUF6 198 aa8.41□□□□□ -1.06
PRPF40B-209ENST00000548825 DNAH3Q8TD57 4116 aa8.4□□□□□ -1.06
PRPF40B-209ENST00000548825 PSPHP1O15172 72 aa8.4□□□□□ -1.07
PRPF40B-209ENST00000548825 H0Y9P7 68 aa8.39□□□□□ -1.07
PRPF40B-209ENST00000548825 A0A087WTM6 91 aa8.39□□□□□ -1.07
PRPF40B-209ENST00000548825 NDUFB1O75438 58 aa8.38□□□□□ -1.07
PRPF40B-209ENST00000548825 CDK2AP2O75956 126 aa8.38□□□□□ -1.07
PRPF40B-209ENST00000548825 IGLV5-52A0A0A0MRZ9 124 aa8.38□□□□□ -1.07
PRPF40B-209ENST00000548825 CIRBP-AS1Q8TBR5 109 aa8.37□□□□□ -1.07
PRPF40B-209ENST00000548825 PSORS1C2Q9UIG4 136 aa8.37□□□□□ -1.07
PRPF40B-209ENST00000548825 C1orf64Q8NEQ6 169 aa8.36□□□□□ -1.07
PRPF40B-209ENST00000548825 PRR15Q8IV56 129 aa8.35□□□□□ -1.07
PRPF40B-209ENST00000548825 PRKDCP78527 4128 aaKnown RBP8.35□□□□□ -1.07
PRPF40B-209ENST00000548825 STARD9Q9P2P6 4700 aa8.35□□□□□ -1.07
PRPF40B-209ENST00000548825 RETNLBQ9BQ08 111 aa8.34□□□□□ -1.07
PRPF40B-209ENST00000548825 KMT2AQ03164 3969 aa8.33□□□□□ -1.08
PRPF40B-209ENST00000548825 A0A1B0GW54 56 aa8.33□□□□□ -1.08
PRPF40B-209ENST00000548825 Q6ZRN7 208 aaPredicted RBP8.33□□□□□ -1.08
PRPF40B-209ENST00000548825 PRO0628Q9UI54 55 aa8.32□□□□□ -1.08
PRPF40B-209ENST00000548825 A8MWP4 228 aa8.32□□□□□ -1.08
PRPF40B-209ENST00000548825 C1orf195Q5TG92 126 aa8.32□□□□□ -1.08
PRPF40B-209ENST00000548825 DNHD1Q96M86 4753 aa8.32□□□□□ -1.08
PRPF40B-209ENST00000548825 DNAH1Q9P2D7 4330 aa8.31□□□□□ -1.08
PRPF40B-209ENST00000548825 hDV103S1A0JD37 113 aa8.31□□□□□ -1.08
PRPF40B-209ENST00000548825 ATP5EP56381 51 aaPredicted RBP8.31□□□□□ -1.08
PRPF40B-209ENST00000548825 SPACA4Q8TDM5 124 aa8.31□□□□□ -1.08
PRPF40B-209ENST00000548825 C1orf134Q5TEV5 83 aa8.3□□□□□ -1.08
PRPF40B-209ENST00000548825 FRAS1Q86XX4 4008 aa8.29□□□□□ -1.08
PRPF40B-209ENST00000548825 LINC00472Q9H8W2 130 aa8.28□□□□□ -1.08
PRPF40B-209ENST00000548825 C4orf48Q5BLP8 95 aa8.28□□□□□ -1.08
PRPF40B-209ENST00000548825 IGLV8-61A0A075B6I0 122 aa8.26□□□□□ -1.09
PRPF40B-209ENST00000548825 A0A087X002 238 aa8.25□□□□□ -1.09
PRPF40B-209ENST00000548825 NOTCH2NLQ7Z3S9 236 aa8.25□□□□□ -1.09
PRPF40B-209ENST00000548825 TRAV22A0A0B4J277 110 aa8.24□□□□□ -1.09
PRPF40B-209ENST00000548825 MMP24-AS1A0A0U1RRL7 71 aa8.22□□□□□ -1.09
PRPF40B-209ENST00000548825 ZNF861PO60384 105 aa8.22□□□□□ -1.09
PRPF40B-209ENST00000548825 KRTAP29-1A8MX34 341 aaPredicted RBP8.21□□□□□ -1.1
PRPF40B-209ENST00000548825 SPRR1BP22528 89 aa8.21□□□□□ -1.1
PRPF40B-209ENST00000548825 A8MUN3 132 aa8.2□□□□□ -1.1
PRPF40B-209ENST00000548825 KRTAP10-2P60368 255 aa8.2□□□□□ -1.1
PRPF40B-209ENST00000548825 ZCCHC13Q8WW36 166 aaKnown RBP8.2□□□□□ -1.1
PRPF40B-209ENST00000548825 ZNF706Q9Y5V0 76 aaPredicted RBP8.19□□□□□ -1.1
PRPF40B-209ENST00000548825 KRTAP13-1Q8IUC0 172 aa8.19□□□□□ -1.1
PRPF40B-209ENST00000548825 WWC2-AS2Q96NR7 200 aa8.19□□□□□ -1.1
PRPF40B-209ENST00000548825 C8orf17Q9NRJ1 99 aa8.19□□□□□ -1.1
PRPF40B-209ENST00000548825 PRR15LQ9BU68 103 aa8.14□□□□□ -1.11
PRPF40B-209ENST00000548825 A0A1B0GVX0 72 aa8.14□□□□□ -1.11
PRPF40B-209ENST00000548825 IGLV7-43P04211 117 aa8.14□□□□□ -1.11
PRPF40B-209ENST00000548825 LCE6AA0A183 80 aa8.13□□□□□ -1.11
PRPF40B-209ENST00000548825 Q96NJ1 140 aa8.13□□□□□ -1.11
PRPF40B-209ENST00000548825 CHKB-CPT1BH3BT56 60 aa8.13□□□□□ -1.11
PRPF40B-209ENST00000548825 SPAG11AQ6PDA7 123 aa8.13□□□□□ -1.11
PRPF40B-209ENST00000548825 Q6ZR54 194 aa8.11□□□□□ -1.11
PRPF40B-209ENST00000548825 A8MU10 97 aa8.11□□□□□ -1.11
PRPF40B-209ENST00000548825 DNAH11Q96DT5 4516 aa8.11□□□□□ -1.11
PRPF40B-209ENST00000548825 VPS13DQ5THJ4 4388 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms