RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 A0A087WVE0 104 aa12.91□□□□□ -0.34
RITA1-201ENST00000548278 HAMPP81172 84 aa12.9□□□□□ -0.34
RITA1-201ENST00000548278 FRAS1Q86XX4 4008 aa12.9□□□□□ -0.34
RITA1-201ENST00000548278 SPRR1BP22528 89 aa12.89□□□□□ -0.35
RITA1-201ENST00000548278 F8WEM9 126 aa12.89□□□□□ -0.35
RITA1-201ENST00000548278 Q8NBF4 154 aa12.88□□□□□ -0.35
RITA1-201ENST00000548278 A0A1B0GW54 56 aa12.87□□□□□ -0.35
RITA1-201ENST00000548278 CXCL6P80162 114 aa12.87□□□□□ -0.35
RITA1-201ENST00000548278 IGLV8-61A0A075B6I0 122 aa12.87□□□□□ -0.35
RITA1-201ENST00000548278 SRRM2Q9UQ35 2752 aaKnown RBP12.87□□□□□ -0.35
RITA1-201ENST00000548278 KRTAP10-2P60368 255 aa12.85□□□□□ -0.35
RITA1-201ENST00000548278 SPRR4Q96PI1 79 aa12.85□□□□□ -0.35
RITA1-201ENST00000548278 DNAH11Q96DT5 4516 aa12.83□□□□□ -0.35
RITA1-201ENST00000548278 NREPQ16612 68 aa12.83□□□□□ -0.36
RITA1-201ENST00000548278 IGFL1Q6UW32 110 aa12.83□□□□□ -0.36
RITA1-201ENST00000548278 PSORS1C2Q9UIG4 136 aa12.83□□□□□ -0.36
RITA1-201ENST00000548278 DNAH8Q96JB1 4490 aa12.83□□□□□ -0.36
RITA1-201ENST00000548278 UQCRQO14949 82 aa12.82□□□□□ -0.36
RITA1-201ENST00000548278 DNAH5Q8TE73 4624 aa12.81□□□□□ -0.36
RITA1-201ENST00000548278 HYDINQ4G0P3 5121 aa12.81□□□□□ -0.36
RITA1-201ENST00000548278 A0A0G2JQZ4 141 aa12.81□□□□□ -0.36
RITA1-201ENST00000548278 SCXQ7RTU7 201 aa12.81□□□□□ -0.36
RITA1-201ENST00000548278 CRYGAP11844 174 aa12.79□□□□□ -0.36
RITA1-201ENST00000548278 ATOX1O00244 68 aa12.79□□□□□ -0.36
RITA1-201ENST00000548278 C9orf153Q5TBE3 101 aa12.77□□□□□ -0.36
RITA1-201ENST00000548278 RPS28P62857 69 aaKnown RBP12.76□□□□□ -0.37
RITA1-201ENST00000548278 FAM30AQ9NZY2 134 aa12.76□□□□□ -0.37
RITA1-201ENST00000548278 FAT2Q9NYQ8 4349 aa12.76□□□□□ -0.37
RITA1-201ENST00000548278 C5orf47Q569G3 176 aa12.74□□□□□ -0.37
RITA1-201ENST00000548278 J3KT08 172 aa12.73□□□□□ -0.37
RITA1-201ENST00000548278 PKD1P98161 4303 aa12.72□□□□□ -0.37
RITA1-201ENST00000548278 BPY2O14599 106 aa12.72□□□□□ -0.37
RITA1-201ENST00000548278 ZNF861PO60384 105 aa12.72□□□□□ -0.37
RITA1-201ENST00000548278 COX7CP15954 63 aa12.72□□□□□ -0.37
RITA1-201ENST00000548278 CIRBP-AS1Q8TBR5 109 aa12.71□□□□□ -0.37
RITA1-201ENST00000548278 LINC00483Q53H64 154 aa12.71□□□□□ -0.38
RITA1-201ENST00000548278 KRTAP10-1P60331 282 aa12.69□□□□□ -0.38
RITA1-201ENST00000548278 Q6ZSA8 131 aa12.69□□□□□ -0.38
RITA1-201ENST00000548278 Q8N9L7 120 aa12.68□□□□□ -0.38
RITA1-201ENST00000548278 ZNF706Q9Y5V0 76 aaPredicted RBP12.68□□□□□ -0.38
RITA1-201ENST00000548278 IGKV4-1P06312 121 aa12.67□□□□□ -0.38
RITA1-201ENST00000548278 IGLV7-43P04211 117 aa12.65□□□□□ -0.38
RITA1-201ENST00000548278 SACSQ9NZJ4 4579 aa12.65□□□□□ -0.38
RITA1-201ENST00000548278 A0A087WSZ3 146 aa12.65□□□□□ -0.39
RITA1-201ENST00000548278 SERP2Q8N6R1 65 aa12.64□□□□□ -0.39
RITA1-201ENST00000548278 IGLV9-49A0A0B4J1Y8 123 aa12.61□□□□□ -0.39
RITA1-201ENST00000548278 DSCR10P59022 87 aa12.6□□□□□ -0.39
RITA1-201ENST00000548278 LCE6AA0A183 80 aa12.59□□□□□ -0.39
RITA1-201ENST00000548278 ANAPC11Q9NYG5 84 aa12.57□□□□□ -0.4
RITA1-201ENST00000548278 RPL37AP61513 92 aaKnown RBP12.57□□□□□ -0.4
RITA1-201ENST00000548278 TMEM258P61165 79 aa12.56□□□□□ -0.4
RITA1-201ENST00000548278 DEFB116Q30KQ4 102 aa12.52□□□□□ -0.4
RITA1-201ENST00000548278 K7EQZ3 153 aa12.52□□□□□ -0.41
RITA1-201ENST00000548278 MOBPQ13875 183 aa12.52□□□□□ -0.41
RITA1-201ENST00000548278 LRP1BQ9NZR2 4599 aa12.51□□□□□ -0.41
RITA1-201ENST00000548278 TRAV7A0A075B6U4 112 aa12.51□□□□□ -0.41
RITA1-201ENST00000548278 LINC00472Q9H8W2 130 aa12.49□□□□□ -0.41
RITA1-201ENST00000548278 LINC00336Q6ZUF6 198 aa12.49□□□□□ -0.41
RITA1-201ENST00000548278 CYSTM1Q9H1C7 97 aa12.45□□□□□ -0.42
RITA1-201ENST00000548278 HRCT1Q6UXD1 115 aa12.43□□□□□ -0.42
RITA1-201ENST00000548278 PKHD1P08F94 4074 aa12.42□□□□□ -0.42
RITA1-201ENST00000548278 OCR1Q9BZK8 76 aa12.41□□□□□ -0.42
RITA1-201ENST00000548278 A0A1B0GVY2 172 aa12.39□□□□□ -0.43
RITA1-201ENST00000548278 HCG22E2RYF7 251 aa12.38□□□□□ -0.43
RITA1-201ENST00000548278 Q96NJ1 140 aa12.38□□□□□ -0.43
RITA1-201ENST00000548278 A8MWP4 228 aa12.38□□□□□ -0.43
RITA1-201ENST00000548278 OXTP01178 125 aa12.37□□□□□ -0.43
RITA1-201ENST00000548278 C20orf197Q8N268 126 aa12.37□□□□□ -0.43
RITA1-201ENST00000548278 VPS13BQ7Z7G8 4022 aa12.37□□□□□ -0.43
RITA1-201ENST00000548278 PRR15Q8IV56 129 aa12.36□□□□□ -0.43
RITA1-201ENST00000548278 Q5XG85 94 aa12.35□□□□□ -0.43
RITA1-201ENST00000548278 SSBP3-AS1Q7Z2R9 100 aa12.34□□□□□ -0.43
RITA1-201ENST00000548278 RYR2Q92736 4967 aa12.33□□□□□ -0.44
RITA1-201ENST00000548278 DYNC1H1Q14204 4646 aaKnown RBP12.32□□□□□ -0.44
RITA1-201ENST00000548278 A0A087X002 238 aa12.31□□□□□ -0.44
RITA1-201ENST00000548278 CD164Q04900 197 aa12.3□□□□□ -0.44
RITA1-201ENST00000548278 C4orf26Q17RF5 130 aa12.3□□□□□ -0.44
RITA1-201ENST00000548278 FAM229BQ4G0N7 80 aa12.3□□□□□ -0.44
RITA1-201ENST00000548278 KRTAP29-1A8MX34 341 aaPredicted RBP12.29□□□□□ -0.44
RITA1-201ENST00000548278 KRTAP1-4P0C5Y4 121 aa12.29□□□□□ -0.44
RITA1-201ENST00000548278 KLKP1Q107X0 134 aa12.29□□□□□ -0.44
RITA1-201ENST00000548278 KRTAP13-2Q52LG2 175 aa12.29□□□□□ -0.44
RITA1-201ENST00000548278 WFDC13Q8IUB5 93 aa12.29□□□□□ -0.44
RITA1-201ENST00000548278 KMT2CQ8NEZ4 4911 aaKnown RBP12.27□□□□□ -0.45
RITA1-201ENST00000548278 SNURFQ9Y675 71 aa12.26□□□□□ -0.45
RITA1-201ENST00000548278 NDUFB1O75438 58 aa12.25□□□□□ -0.45
RITA1-201ENST00000548278 TMEM254Q8TBM7 123 aa12.25□□□□□ -0.45
RITA1-201ENST00000548278 CASC2Q6XLA1 102 aa12.23□□□□□ -0.45
RITA1-201ENST00000548278 MMP24-AS1A0A0U1RRL7 71 aa12.21□□□□□ -0.45
RITA1-201ENST00000548278 H7BZZ5 65 aa12.19□□□□□ -0.46
RITA1-201ENST00000548278 A0A0U1RQV1 116 aa12.18□□□□□ -0.46
RITA1-201ENST00000548278 SERP1Q9Y6X1 66 aa12.18□□□□□ -0.46
RITA1-201ENST00000548278 SMR3BP02814 79 aaPredicted RBP12.18□□□□□ -0.46
RITA1-201ENST00000548278 SPINK6Q6UWN8 80 aa12.18□□□□□ -0.46
RITA1-201ENST00000548278 FAM236DA0A1B0GTK5 79 aa12.17□□□□□ -0.46
RITA1-201ENST00000548278 FAM236CP0DP71 79 aa12.17□□□□□ -0.46
RITA1-201ENST00000548278 APOBP04114 4563 aaKnown RBP12.17□□□□□ -0.46
RITA1-201ENST00000548278 A0A1B0GVX0 72 aa12.17□□□□□ -0.46
RITA1-201ENST00000548278 PLA2G1BP04054 148 aaKnown RBP12.16□□□□□ -0.46
RITA1-201ENST00000548278 ASB16-AS1Q495Z4 193 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms