RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 Q96NJ1 140 aa10.23□□□□□ -0.77
GATC-202ENST00000548171 OCIAD2Q56VL3 154 aa10.22□□□□□ -0.77
GATC-202ENST00000548171 LINC00575Q6W349 94 aa10.22□□□□□ -0.77
GATC-202ENST00000548171 Q6ZQY7 126 aa10.22□□□□□ -0.77
GATC-202ENST00000548171 SLC7A5P1Q8MH63 180 aa10.22□□□□□ -0.77
GATC-202ENST00000548171 C3orf79P0CE67 100 aa10.21□□□□□ -0.77
GATC-202ENST00000548171 HIST1H2BKO60814 126 aa10.2□□□□□ -0.78
GATC-202ENST00000548171 HIST1H2BJP06899 126 aa10.2□□□□□ -0.78
GATC-202ENST00000548171 HIST1H2BOP23527 126 aa10.2□□□□□ -0.78
GATC-202ENST00000548171 HIST1H2BBP33778 126 aa10.2□□□□□ -0.78
GATC-202ENST00000548171 HIST1H2BDP58876 126 aa10.2□□□□□ -0.78
GATC-202ENST00000548171 HIST1H2BCP62807 126 aa10.2□□□□□ -0.78
GATC-202ENST00000548171 HIST2H2BEQ16778 126 aa10.2□□□□□ -0.78
GATC-202ENST00000548171 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.2□□□□□ -0.78
GATC-202ENST00000548171 HIST1H2BHQ93079 126 aa10.2□□□□□ -0.78
GATC-202ENST00000548171 HIST1H2BNQ99877 126 aa10.2□□□□□ -0.78
GATC-202ENST00000548171 HIST1H2BMQ99879 126 aa10.2□□□□□ -0.78
GATC-202ENST00000548171 hADV29S1A0JD25 119 aa10.19□□□□□ -0.78
GATC-202ENST00000548171 LST1O00453 97 aa10.19□□□□□ -0.78
GATC-202ENST00000548171 C20orf166-AS1Q96NR2 134 aa10.18□□□□□ -0.78
GATC-202ENST00000548171 ANKRD39Q53RE8 183 aa10.17□□□□□ -0.78
GATC-202ENST00000548171 A8MUU9 505 aa10.15□□□□□ -0.78
GATC-202ENST00000548171 KRTDAPP60985 99 aa10.15□□□□□ -0.78
GATC-202ENST00000548171 MT2AP02795 61 aa10.14□□□□□ -0.79
GATC-202ENST00000548171 PPDPFLQ8WWR9 84 aa10.14□□□□□ -0.79
GATC-202ENST00000548171 SCGB1D1O95968 90 aa10.13□□□□□ -0.79
GATC-202ENST00000548171 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.13□□□□□ -0.79
GATC-202ENST00000548171 SS18L2Q9UHA2 77 aa10.13□□□□□ -0.79
GATC-202ENST00000548171 FCGBPQ9Y6R7 5405 aaPredicted RBP10.12□□□□□ -0.79
GATC-202ENST00000548171 KRTAP19-1Q8IUB9 90 aa10.1□□□□□ -0.79
GATC-202ENST00000548171 SNHG12Q9BXW3 62 aa10.1□□□□□ -0.79
GATC-202ENST00000548171 LCE2BO14633 110 aa10.07□□□□□ -0.8
GATC-202ENST00000548171 ATOH7Q8N100 152 aa10.07□□□□□ -0.8
GATC-202ENST00000548171 H3BUT2 72 aa10.06□□□□□ -0.8
GATC-202ENST00000548171 MT1FP04733 61 aa10.05□□□□□ -0.8
GATC-202ENST00000548171 COA6Q5JTJ3 125 aaKnown RBP10.05□□□□□ -0.8
GATC-202ENST00000548171 FAM236DA0A1B0GTK5 79 aa10.04□□□□□ -0.8
GATC-202ENST00000548171 FAM236CP0DP71 79 aa10.04□□□□□ -0.8
GATC-202ENST00000548171 SNRPEP62304 92 aaKnown RBP10.03□□□□□ -0.8
GATC-202ENST00000548171 BVES-AS1Q5T3Y7 98 aa10.03□□□□□ -0.8
GATC-202ENST00000548171 KRTAP9-3Q9BYQ3 159 aa10.03□□□□□ -0.8
GATC-202ENST00000548171 KRTAP10-10P60014 251 aa10.01□□□□□ -0.81
GATC-202ENST00000548171 TEN1Q86WV5 123 aa10.01□□□□□ -0.81
GATC-202ENST00000548171 RBM12B-AS1Q9P1G2 102 aa9.98□□□□□ -0.81
GATC-202ENST00000548171 A0A087WSZ3 146 aa9.96□□□□□ -0.82
GATC-202ENST00000548171 DSCR10P59022 87 aa9.96□□□□□ -0.82
GATC-202ENST00000548171 C12orf57Q99622 126 aa9.96□□□□□ -0.82
GATC-202ENST00000548171 LINC00846Q9NV44 126 aa9.96□□□□□ -0.82
GATC-202ENST00000548171 SYNE2Q8WXH0 6885 aaKnown RBP9.95□□□□□ -0.82
GATC-202ENST00000548171 KRTAP16-1A8MUX0 517 aa9.94□□□□□ -0.82
GATC-202ENST00000548171 MPLKIPQ8TAP9 179 aa9.94□□□□□ -0.82
GATC-202ENST00000548171 MACF1Q9UPN3 7388 aaKnown RBP9.94□□□□□ -0.82
GATC-202ENST00000548171 SNCGO76070 127 aa9.93□□□□□ -0.82
GATC-202ENST00000548171 HRES1P13985 223 aa9.91□□□□□ -0.82
GATC-202ENST00000548171 NDUFV3P56181 108 aaKnown RBP9.91□□□□□ -0.82
GATC-202ENST00000548171 LINC00313P59037 77 aa9.91□□□□□ -0.82
GATC-202ENST00000548171 SIGMAR1Q99720 223 aa9.9□□□□□ -0.82
GATC-202ENST00000548171 HSBP1L1C9JCN9 74 aa9.88□□□□□ -0.83
GATC-202ENST00000548171 H3BMG7 143 aa9.85□□□□□ -0.83
GATC-202ENST00000548171 GHRHP01286 108 aa9.84□□□□□ -0.83
GATC-202ENST00000548171 KRTAP19-6Q3LI70 58 aa9.84□□□□□ -0.83
GATC-202ENST00000548171 H0YGX0 51 aa9.83□□□□□ -0.84
GATC-202ENST00000548171 NOTCH2NLQ7Z3S9 236 aa9.83□□□□□ -0.84
GATC-202ENST00000548171 HIST1H4GQ99525 98 aa9.83□□□□□ -0.84
GATC-202ENST00000548171 MTURNQ8N3F0 131 aa9.82□□□□□ -0.84
GATC-202ENST00000548171 IGKV4-1P06312 121 aa9.81□□□□□ -0.84
GATC-202ENST00000548171 A0A1W2PNM2 257 aa9.8□□□□□ -0.84
GATC-202ENST00000548171 FAM218AQ96MZ4 157 aa9.79□□□□□ -0.84
GATC-202ENST00000548171 FABP2P12104 132 aa9.76□□□□□ -0.85
GATC-202ENST00000548171 RAB37Q96AX2 223 aa9.76□□□□□ -0.85
GATC-202ENST00000548171 TRBV7-4A0A0J9YYF1 115 aa9.74□□□□□ -0.85
GATC-202ENST00000548171 A0A1B0GX51 115 aa9.74□□□□□ -0.85
GATC-202ENST00000548171 HIST1H2BLQ99880 126 aa9.72□□□□□ -0.85
GATC-202ENST00000548171 A0A0B4J2C4 111 aa9.71□□□□□ -0.86
GATC-202ENST00000548171 S100A2P29034 98 aa9.71□□□□□ -0.86
GATC-202ENST00000548171 ANKRD29Q8N6D5 301 aa9.71□□□□□ -0.86
GATC-202ENST00000548171 IGHV6-1A0A0B4J1U7 121 aa9.7□□□□□ -0.86
GATC-202ENST00000548171 LINC00472Q9H8W2 130 aa9.7□□□□□ -0.86
GATC-202ENST00000548171 COX8AP10176 69 aa9.69□□□□□ -0.86
GATC-202ENST00000548171 HIST3H2BBQ8N257 126 aa9.69□□□□□ -0.86
GATC-202ENST00000548171 A8MWP4 228 aa9.68□□□□□ -0.86
GATC-202ENST00000548171 DLEU1O43261 78 aa9.68□□□□□ -0.86
GATC-202ENST00000548171 KRTAP6-3Q3LI67 103 aa9.68□□□□□ -0.86
GATC-202ENST00000548171 DEFB116Q30KQ4 102 aa9.66□□□□□ -0.86
GATC-202ENST00000548171 C8orf87E5RJ46 101 aa9.64□□□□□ -0.87
GATC-202ENST00000548171 SPINK7P58062 85 aa9.63□□□□□ -0.87
GATC-202ENST00000548171 ZCCHC13Q8WW36 166 aaKnown RBP9.63□□□□□ -0.87
GATC-202ENST00000548171 H3BQ85 93 aa9.62□□□□□ -0.87
GATC-202ENST00000548171 TRACP01848 142 aa9.61□□□□□ -0.87
GATC-202ENST00000548171 HIGD1BQ9P298 99 aa9.61□□□□□ -0.87
GATC-202ENST00000548171 A0A1B0GVX0 72 aa9.6□□□□□ -0.87
GATC-202ENST00000548171 CCKP06307 115 aa9.6□□□□□ -0.87
GATC-202ENST00000548171 PRO1854Q9UHT4 67 aa9.6□□□□□ -0.87
GATC-202ENST00000548171 ORMDL1Q9P0S3 153 aa9.59□□□□□ -0.87
GATC-202ENST00000548171 A0A1B0GV72 72 aa9.57□□□□□ -0.88
GATC-202ENST00000548171 DNAL4O96015 105 aa9.57□□□□□ -0.88
GATC-202ENST00000548171 TMEM256-PLSCR3K7ERE1 68 aa9.55□□□□□ -0.88
GATC-202ENST00000548171 Q8N9P0 234 aaPredicted RBP9.55□□□□□ -0.88
GATC-202ENST00000548171 TMEM238LA0A1B0GVL6 79 aa9.54□□□□□ -0.88
GATC-202ENST00000548171 A6NJY4 79 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms