RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 PCP2Q8IVA1 136 aa9.98□□□□□ -0.81
CHERP-204ENST00000546538 MUSTN1Q8IVN3 82 aa9.97□□□□□ -0.81
CHERP-204ENST00000546538 LORP23490 312 aaPredicted RBP9.96□□□□□ -0.82
CHERP-204ENST00000546538 A6NDN8 102 aa9.95□□□□□ -0.82
CHERP-204ENST00000546538 COX8AP10176 69 aa9.95□□□□□ -0.82
CHERP-204ENST00000546538 IFITM1P13164 125 aa9.94□□□□□ -0.82
CHERP-204ENST00000546538 C14orf144Q96I85 54 aa9.94□□□□□ -0.82
CHERP-204ENST00000546538 UQCR10Q9UDW1 63 aa9.94□□□□□ -0.82
CHERP-204ENST00000546538 RPL37P61927 97 aaKnown RBP9.93□□□□□ -0.82
CHERP-204ENST00000546538 SMIM11BQ8TCY0 68 aa9.93□□□□□ -0.82
CHERP-204ENST00000546538 KRTAP10-6P60371 365 aaPredicted RBP9.92□□□□□ -0.82
CHERP-204ENST00000546538 DLEU1O43261 78 aa9.91□□□□□ -0.82
CHERP-204ENST00000546538 Q6ZVH6 145 aa9.9□□□□□ -0.82
CHERP-204ENST00000546538 CFC1BP0CG36 223 aa9.89□□□□□ -0.83
CHERP-204ENST00000546538 A4D1N5 150 aa9.88□□□□□ -0.83
CHERP-204ENST00000546538 COPS9Q8WXC6 57 aa9.88□□□□□ -0.83
CHERP-204ENST00000546538 TRAV13-2A0A0B4J235 113 aa9.85□□□□□ -0.83
CHERP-204ENST00000546538 PCP4L1A6NKN8 68 aa9.85□□□□□ -0.83
CHERP-204ENST00000546538 HIGD1BQ9P298 99 aa9.83□□□□□ -0.84
CHERP-204ENST00000546538 LINC00575Q6W349 94 aa9.82□□□□□ -0.84
CHERP-204ENST00000546538 NHP2Q9NX24 153 aaKnown RBP9.82□□□□□ -0.84
CHERP-204ENST00000546538 C2orf91Q6ZV80 131 aa9.82□□□□□ -0.84
CHERP-204ENST00000546538 TCL1BO95988 128 aa9.8□□□□□ -0.84
CHERP-204ENST00000546538 Q6ZQY7 126 aa9.79□□□□□ -0.84
CHERP-204ENST00000546538 IGFL1Q6UW32 110 aa9.78□□□□□ -0.84
CHERP-204ENST00000546538 HSD52Q0P140 79 aa9.77□□□□□ -0.85
CHERP-204ENST00000546538 TRBV7-7A0A0K0K1E9 115 aa9.76□□□□□ -0.85
CHERP-204ENST00000546538 HIST1H4GQ99525 98 aa9.76□□□□□ -0.85
CHERP-204ENST00000546538 M0R2T5 61 aa9.75□□□□□ -0.85
CHERP-204ENST00000546538 COX6B2Q6YFQ2 88 aa9.75□□□□□ -0.85
CHERP-204ENST00000546538 hADV29S1A0JD25 119 aa9.74□□□□□ -0.85
CHERP-204ENST00000546538 F8WEM9 126 aa9.74□□□□□ -0.85
CHERP-204ENST00000546538 M0R143 59 aa9.74□□□□□ -0.85
CHERP-204ENST00000546538 CLEC2BQ92478 149 aa9.74□□□□□ -0.85
CHERP-204ENST00000546538 VAMP3Q15836 100 aa9.73□□□□□ -0.85
CHERP-204ENST00000546538 Q6JHZ5 121 aa9.73□□□□□ -0.85
CHERP-204ENST00000546538 OCIAD2Q56VL3 154 aa9.72□□□□□ -0.85
CHERP-204ENST00000546538 CEND1Q8N111 149 aa9.71□□□□□ -0.86
CHERP-204ENST00000546538 OBSCN-AS1Q96MR7 158 aa9.71□□□□□ -0.86
CHERP-204ENST00000546538 TMEM238LA0A1B0GVL6 79 aa9.69□□□□□ -0.86
CHERP-204ENST00000546538 A6NJY4 79 aa9.69□□□□□ -0.86
CHERP-204ENST00000546538 Q75L30 129 aa9.68□□□□□ -0.86
CHERP-204ENST00000546538 H3BUT2 72 aa9.67□□□□□ -0.86
CHERP-204ENST00000546538 BATFQ16520 125 aa9.67□□□□□ -0.86
CHERP-204ENST00000546538 BVES-AS1Q5T3Y7 98 aa9.67□□□□□ -0.86
CHERP-204ENST00000546538 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.67□□□□□ -0.86
CHERP-204ENST00000546538 FXYD2P54710 66 aa9.65□□□□□ -0.87
CHERP-204ENST00000546538 SNHG12Q9BXW3 62 aa9.64□□□□□ -0.87
CHERP-204ENST00000546538 PPDPFLQ8WWR9 84 aa9.62□□□□□ -0.87
CHERP-204ENST00000546538 ATP11AUNQ6ZP68 121 aa9.61□□□□□ -0.87
CHERP-204ENST00000546538 COL5A1-AS1Q5SY13 56 aa9.59□□□□□ -0.87
CHERP-204ENST00000546538 Q6Q795 121 aa9.59□□□□□ -0.87
CHERP-204ENST00000546538 LST1O00453 97 aa9.58□□□□□ -0.88
CHERP-204ENST00000546538 FAM218AQ96MZ4 157 aa9.58□□□□□ -0.88
CHERP-204ENST00000546538 Q96NJ1 140 aa9.58□□□□□ -0.88
CHERP-204ENST00000546538 A0A0B4J2C4 111 aa9.57□□□□□ -0.88
CHERP-204ENST00000546538 RAB37Q96AX2 223 aa9.57□□□□□ -0.88
CHERP-204ENST00000546538 CFC1P0CG37 223 aa9.56□□□□□ -0.88
CHERP-204ENST00000546538 C20orf166-AS1Q96NR2 134 aa9.56□□□□□ -0.88
CHERP-204ENST00000546538 A8MUU9 505 aa9.55□□□□□ -0.88
CHERP-204ENST00000546538 KRTAP9-8Q9BYQ0 159 aa9.55□□□□□ -0.88
CHERP-204ENST00000546538 USH2AO75445 5202 aa9.55□□□□□ -0.88
CHERP-204ENST00000546538 K7ERJ3 54 aa9.54□□□□□ -0.88
CHERP-204ENST00000546538 SSPOA2VEC9 5147 aa9.53□□□□□ -0.88
CHERP-204ENST00000546538 PRO1854Q9UHT4 67 aa9.53□□□□□ -0.88
CHERP-204ENST00000546538 NDUFV3P56181 108 aaKnown RBP9.5□□□□□ -0.89
CHERP-204ENST00000546538 TEN1Q86WV5 123 aa9.5□□□□□ -0.89
CHERP-204ENST00000546538 A0A087WSZ3 146 aa9.49□□□□□ -0.89
CHERP-204ENST00000546538 KRTAP16-1A8MUX0 517 aa9.48□□□□□ -0.89
CHERP-204ENST00000546538 SS18L2Q9UHA2 77 aa9.48□□□□□ -0.89
CHERP-204ENST00000546538 TAX1BP3O14907 124 aa9.48□□□□□ -0.89
CHERP-204ENST00000546538 DSCR10P59022 87 aa9.47□□□□□ -0.89
CHERP-204ENST00000546538 A0A1W2PNM2 257 aa9.45□□□□□ -0.9
CHERP-204ENST00000546538 C9orf118A6NHY6 69 aa9.45□□□□□ -0.9
CHERP-204ENST00000546538 H0YGX0 51 aa9.45□□□□□ -0.9
CHERP-204ENST00000546538 H3BMG7 143 aa9.43□□□□□ -0.9
CHERP-204ENST00000546538 PSMB2P49721 201 aa9.43□□□□□ -0.9
CHERP-204ENST00000546538 LYRM7Q5U5X0 104 aa9.43□□□□□ -0.9
CHERP-204ENST00000546538 COX6CP09669 75 aa9.4□□□□□ -0.9
CHERP-204ENST00000546538 NAA38Q9BRA0 125 aaKnown RBP9.4□□□□□ -0.9
CHERP-204ENST00000546538 FABP2P12104 132 aa9.39□□□□□ -0.91
CHERP-204ENST00000546538 A0A1W2PPM0 123 aa9.39□□□□□ -0.91
CHERP-204ENST00000546538 NOTCH2NLQ7Z3S9 236 aa9.39□□□□□ -0.91
CHERP-204ENST00000546538 SCGB1C2P0DMR2 95 aa9.38□□□□□ -0.91
CHERP-204ENST00000546538 A0A1B0GX51 115 aa9.37□□□□□ -0.91
CHERP-204ENST00000546538 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.37□□□□□ -0.91
CHERP-204ENST00000546538 TRIAP1O43715 76 aa9.37□□□□□ -0.91
CHERP-204ENST00000546538 MT2AP02795 61 aa9.37□□□□□ -0.91
CHERP-204ENST00000546538 SNCGO76070 127 aa9.36□□□□□ -0.91
CHERP-204ENST00000546538 SIGMAR1Q99720 223 aa9.36□□□□□ -0.91
CHERP-204ENST00000546538 TRBV20-1A0A075B6N2 111 aa9.35□□□□□ -0.91
CHERP-204ENST00000546538 MPLKIPQ8TAP9 179 aa9.34□□□□□ -0.91
CHERP-204ENST00000546538 A0A1B0GV72 72 aa9.32□□□□□ -0.92
CHERP-204ENST00000546538 A0A1B0GV90 55 aa9.32□□□□□ -0.92
CHERP-204ENST00000546538 HRES1P13985 223 aa9.32□□□□□ -0.92
CHERP-204ENST00000546538 SPCS1Q9Y6A9 102 aa9.32□□□□□ -0.92
CHERP-204ENST00000546538 FCGBPQ9Y6R7 5405 aaPredicted RBP9.32□□□□□ -0.92
CHERP-204ENST00000546538 MT1FP04733 61 aa9.31□□□□□ -0.92
CHERP-204ENST00000546538 LINC00313P59037 77 aa9.31□□□□□ -0.92
CHERP-204ENST00000546538 GTF2H5Q6ZYL4 71 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms